pontine reticular formation, left Gene Set

Dataset Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
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Genes

341 genes with high or low expression in pontine reticular formation, left relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
FEV FEV (ETS oncogene family) 1.69767
TPH2 tryptophan hydroxylase 2 1.67429
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 1.65128
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 1.47859
F13A1 coagulation factor XIII, A1 polypeptide 1.40587
FHOD3 formin homology 2 domain containing 3 1.36764
DRD5 dopamine receptor D5 1.36264
CRYBA2 crystallin, beta A2 1.29324
PGM3 phosphoglucomutase 3 1.28887
CCR3 chemokine (C-C motif) receptor 3 1.28093
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 1.27443
GATA3 GATA binding protein 3 1.18996
LYPD5 LY6/PLAUR domain containing 5 1.17396
C21ORF62 chromosome 21 open reading frame 62 1.17315
KCNS3 potassium voltage-gated channel, modifier subfamily S, member 3 1.16012
NXPH2 neurexophilin 2 1.1428
BMP5 bone morphogenetic protein 5 1.13712
GPR132 G protein-coupled receptor 132 1.1281
NXPH1 neurexophilin 1 1.11955
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma 1.11842
HSPE1P7 heat shock 10kDa protein 1 pseudogene 7 1.09569
HCRTR2 hypocretin (orexin) receptor 2 1.08019
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 1.07722
MVK mevalonate kinase 1.06292
CSAG4 CSAG family, member 4 (pseudogene) 1.05902
TCHH trichohyalin 1.0525
TMEM120A transmembrane protein 120A 1.05198
TRADD TNFRSF1A-associated via death domain 1.04851
OR13C5 olfactory receptor, family 13, subfamily C, member 5 1.04175
PTGES prostaglandin E synthase 1.03829
PDCD6IP programmed cell death 6 interacting protein 1.03593
DNAJC18 DnaJ (Hsp40) homolog, subfamily C, member 18 1.02493
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene 1.02102
LUM lumican 1.02024
CACYBP calcyclin binding protein 1.00755
CHD6 chromodomain helicase DNA binding protein 6 1.00657
OTP orthopedia homeobox 1.00361
THSD7B thrombospondin, type I, domain containing 7B 1.0033
KPRP keratinocyte proline-rich protein 0.998303
INPP5F inositol polyphosphate-5-phosphatase F 0.997723
TMEM245 transmembrane protein 245 0.986702
EIF1B eukaryotic translation initiation factor 1B 0.98619
CCNB1 cyclin B1 0.984807
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.984489
GRM8 glutamate receptor, metabotropic 8 0.981966
IGFBP1 insulin-like growth factor binding protein 1 0.97675
PTPRD protein tyrosine phosphatase, receptor type, D 0.976097
C1ORF174 chromosome 1 open reading frame 174 0.971752
TMEM117 transmembrane protein 117 0.957399
LINC01120 long intergenic non-protein coding RNA 1120 0.952286
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 0.952283
MIR100HG mir-100-let-7a-2 cluster host gene 0.950695
TMEM253 transmembrane protein 253 0.947968
C17ORF75 chromosome 17 open reading frame 75 0.944992
AMIGO2 adhesion molecule with Ig-like domain 2 0.942171
ARHGAP24 Rho GTPase activating protein 24 0.941063
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7 0.940186
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.936197
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.935233
HOXA4 homeobox A4 0.932321
CCDC152 coiled-coil domain containing 152 0.929829
IMPG2 interphotoreceptor matrix proteoglycan 2 0.92707
PNPO pyridoxamine 5'-phosphate oxidase 0.924246
NDNF neuron-derived neurotrophic factor 0.920043
BTBD11 BTB (POZ) domain containing 11 0.917621
LOC646050 axin interactor, dorsalization associated pseudogene 0.916538
HOXA7 homeobox A7 0.916476
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 0.908544
IRX2 iroquois homeobox 2 0.908485
HYPK huntingtin interacting protein K 0.905722
GRIK1 glutamate receptor, ionotropic, kainate 1 0.905474
FRA10AC1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 0.898645
ACAT2 acetyl-CoA acetyltransferase 2 0.897584
DMXL1 Dmx-like 1 0.896742
FAM225B family with sequence similarity 225, member B (non-protein coding) 0.896731
FAM199X family with sequence similarity 199, X-linked 0.895901
CDH19 cadherin 19, type 2 0.892666
RGS2 regulator of G-protein signaling 2 0.891859
EPDR1 ependymin related 1 0.89103
HOXB3 homeobox B3 0.889875
TMEM191A transmembrane protein 191A (pseudogene) 0.887085
ATP5I ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E 0.882887
INA internexin neuronal intermediate filament protein, alpha 0.882386
CPEB3 cytoplasmic polyadenylation element binding protein 3 0.881782
MFSD6 major facilitator superfamily domain containing 6 0.879787
PTPN20 protein tyrosine phosphatase, non-receptor type 20 0.876003
CRBN cereblon 0.872319
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 0.871265
TMEM33 transmembrane protein 33 0.86894
STX16 syntaxin 16 0.867538
TWF1 twinfilin actin binding protein 1 0.867369
LINC00909 long intergenic non-protein coding RNA 909 0.866737
PAIP2B poly(A) binding protein interacting protein 2B 0.866635
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.866042
PCDH12 protocadherin 12 0.862969
THAP10 THAP domain containing 10 0.859603
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5 0.858844
ST13P18 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 18 0.858635
TTLL7 tubulin tyrosine ligase-like family member 7 0.857747
ATP10B ATPase, class V, type 10B 0.855971
MTMR4 myotubularin related protein 4 0.855873
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.855573
TRAPPC3L trafficking protein particle complex 3-like 0.855406
KANK4 KN motif and ankyrin repeat domains 4 0.85463
RCAN2 regulator of calcineurin 2 0.853853
MAB21L2 mab-21-like 2 (C. elegans) 0.853212
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 0.852621
MYBPC2 myosin binding protein C, fast type 0.851521
HSPA4L heat shock 70kDa protein 4-like 0.851242
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8 0.850699
PCP4L1 Purkinje cell protein 4 like 1 0.850626
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 0.850231
RNMT RNA (guanine-7-) methyltransferase 0.849945
MMEL1 membrane metallo-endopeptidase-like 1 0.84966
ELOVL4 ELOVL fatty acid elongase 4 0.848941
CSDE1 cold shock domain containing E1, RNA-binding 0.848703
USP32 ubiquitin specific peptidase 32 0.847601
MCF2 MCF.2 cell line derived transforming sequence 0.847518
BUB3 BUB3 mitotic checkpoint protein 0.846769
ASB18 ankyrin repeat and SOCS box containing 18 0.846502
KLK10 kallikrein-related peptidase 10 0.844768
GLRX3 glutaredoxin 3 0.844224
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A 0.843526
TRIM2 tripartite motif containing 2 0.842178
DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 0.840483
SC5D sterol-C5-desaturase 0.839541
SNX27 sorting nexin family member 27 0.839257
ESYT1 extended synaptotagmin-like protein 1 0.836784
HOXA3 homeobox A3 0.836171
RAB5B RAB5B, member RAS oncogene family 0.836049
WDR70 WD repeat domain 70 0.835706
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.835305
SULF2 sulfatase 2 0.834982
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.834952
EIF3J eukaryotic translation initiation factor 3, subunit J 0.83433
LOC400043 uncharacterized LOC400043 0.833647
RBM11 RNA binding motif protein 11 0.832453
HCCAT5 hepatocellular carcinoma associated transcript 5 (non-protein coding) 0.83239
PFDN2 prefoldin subunit 2 0.831135
C1ORF68 chromosome 1 open reading frame 68 0.829087
IGF1 insulin-like growth factor 1 (somatomedin C) 0.827207
COPS3 COP9 signalosome subunit 3 0.826721
MUSTN1 musculoskeletal, embryonic nuclear protein 1 0.826409
LOH12CR1 loss of heterozygosity, 12, chromosomal region 1 0.824401

low expression

Symbol Name Standardized Value
NLRX1 NLR family member X1 -1.43198
ZNRF3 zinc and ring finger 3 -1.38598
TMEM216 transmembrane protein 216 -1.32638
DMC1 DNA meiotic recombinase 1 -1.28664
MTA1 metastasis associated 1 -1.2864
CCDC9 coiled-coil domain containing 9 -1.26542
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal -1.26268
C2ORF81 chromosome 2 open reading frame 81 -1.23376
CROCC ciliary rootlet coiled-coil, rootletin -1.22189
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -1.20086
CTAGE15 CTAGE family, member 15 -1.19798
KCNK4 potassium channel, two pore domain subfamily K, member 4 -1.19111
PFN3 profilin 3 -1.16432
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 -1.1637
DTX1 deltex 1, E3 ubiquitin ligase -1.14258
FAM107A family with sequence similarity 107, member A -1.13993
PKP2 plakophilin 2 -1.13769
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) -1.13293
MZF1 myeloid zinc finger 1 -1.12502
KDM5C lysine (K)-specific demethylase 5C -1.12293
CTSH cathepsin H -1.12066
C22ORF24 chromosome 22 open reading frame 24 -1.11504
KCTD15 potassium channel tetramerization domain containing 15 -1.11121
RMDN2 regulator of microtubule dynamics 2 -1.10735
TMEM8A transmembrane protein 8A -1.10549
DUSP5P1 dual specificity phosphatase 5 pseudogene 1 -1.1041
TMEM238 transmembrane protein 238 -1.10122
MIOS missing oocyte, meiosis regulator, homolog (Drosophila) -1.09975
NOTCH2NL notch 2 N-terminal like -1.09855
GOLGA2P10 golgin A2 pseudogene 10 -1.09382
TNNT3 troponin T type 3 (skeletal, fast) -1.09328
LGALS3 lectin, galactoside-binding, soluble, 3 -1.08051
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2 -1.07853
CRLS1 cardiolipin synthase 1 -1.07074
PYY peptide YY -1.06059
STX5 syntaxin 5 -1.05983
CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit -1.05662
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1 -1.05636
GJB5 gap junction protein, beta 5, 31.1kDa -1.05485
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -1.04626
CRYGN crystallin, gamma N -1.04173
SYCP3 synaptonemal complex protein 3 -1.0336
AXIN2 axin 2 -1.0329
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 -1.03119
FAM57A family with sequence similarity 57, member A -1.03009
CCDC28B coiled-coil domain containing 28B -1.02526
ZNF358 zinc finger protein 358 -1.01692
EXOSC4 exosome component 4 -1.01558
ATP13A1 ATPase type 13A1 -1.01301
IDUA iduronidase, alpha-L- -1.0106
R3HDM4 R3H domain containing 4 -1.00776
C17ORF70 chromosome 17 open reading frame 70 -0.99995
RPS4Y2 ribosomal protein S4, Y-linked 2 -0.997123
PGA3 pepsinogen 3, group I (pepsinogen A) -0.989897
RGL2 ral guanine nucleotide dissociation stimulator-like 2 -0.988431
HPX hemopexin -0.988301
POLD2 polymerase (DNA directed), delta 2, accessory subunit -0.985761
VHLL von Hippel-Lindau tumor suppressor-like -0.984891
TAPBP TAP binding protein (tapasin) -0.984203
ZBTB7C zinc finger and BTB domain containing 7C -0.983646
PHF21B PHD finger protein 21B -0.982146
LINC00923 long intergenic non-protein coding RNA 923 -0.981434
PPP1R16A protein phosphatase 1, regulatory subunit 16A -0.981168
BAD BCL2-associated agonist of cell death -0.980496
RASA4CP RAS p21 protein activator 4C, pseudogene -0.980274
TCTN1 tectonic family member 1 -0.980192
MIDN midnolin -0.977679
TMEM234 transmembrane protein 234 -0.976176
THSD1 thrombospondin, type I, domain containing 1 -0.968955
KLHL26 kelch-like family member 26 -0.96788
ADORA2B adenosine A2b receptor -0.966617
KLHL30 kelch-like family member 30 -0.965952
NR2F6 nuclear receptor subfamily 2, group F, member 6 -0.964331
PYDC2 pyrin domain containing 2 -0.964037
ENKD1 enkurin domain containing 1 -0.96391
ZNF81 zinc finger protein 81 -0.962483
C8ORF86 chromosome 8 open reading frame 86 -0.962445
VRK3 vaccinia related kinase 3 -0.959007
ERI3 ERI1 exoribonuclease family member 3 -0.958451
RSPRY1 ring finger and SPRY domain containing 1 -0.95809
C16ORF52 chromosome 16 open reading frame 52 -0.956626
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) -0.955965
WDR18 WD repeat domain 18 -0.955719
PRODH proline dehydrogenase (oxidase) 1 -0.955527
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.952114
LTK leukocyte receptor tyrosine kinase -0.951628
DGAT1 diacylglycerol O-acyltransferase 1 -0.949553
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding) -0.94945
KIF27 kinesin family member 27 -0.949405
MOK MOK protein kinase -0.948551
GAL3ST3 galactose-3-O-sulfotransferase 3 -0.942456
KPTN kaptin (actin binding protein) -0.94141
DNAH1 dynein, axonemal, heavy chain 1 -0.939795
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B -0.936014
KLHL36 kelch-like family member 36 -0.933476
LSMEM1 leucine-rich single-pass membrane protein 1 -0.931233
CRB1 crumbs family member 1, photoreceptor morphogenesis associated -0.930671
SELE selectin E -0.929431
SH3GL1 SH3-domain GRB2-like 1 -0.928978
C1ORF159 chromosome 1 open reading frame 159 -0.928286
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa -0.927799
GLI4 GLI family zinc finger 4 -0.927342
CDC42EP4 CDC42 effector protein (Rho GTPase binding) 4 -0.925331
DGCR14 DiGeorge syndrome critical region gene 14 -0.924985
SEL1L3 sel-1 suppressor of lin-12-like 3 (C. elegans) -0.920698
GLI2 GLI family zinc finger 2 -0.919406
MTF2 metal response element binding transcription factor 2 -0.916195
FLJ45248 FLJ45248 protein -0.915807
EPOR erythropoietin receptor -0.914245
MST1R macrophage stimulating 1 receptor -0.914054
GPR173 G protein-coupled receptor 173 -0.912117
NPEPL1 aminopeptidase-like 1 -0.910055
BIN3 bridging integrator 3 -0.907834
GAS2L1 growth arrest-specific 2 like 1 -0.907704
GSTM4 glutathione S-transferase mu 4 -0.90761
CTU1 cytosolic thiouridylase subunit 1 -0.905011
SEPHS1P4 selenophosphate synthetase 1 pseudogene 4 -0.903991
THAP7 THAP domain containing 7 -0.903526
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 -0.90267
FBXW9 F-box and WD repeat domain containing 9 -0.901517
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) -0.901019
PP13 vegetative cell wall protein gp1 -0.900831
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila) -0.900548
UBE2I ubiquitin-conjugating enzyme E2I -0.898996
PLIN5 perilipin 5 -0.897667
CEP295 centrosomal protein 295kDa -0.894944
SORBS1 sorbin and SH3 domain containing 1 -0.894771
DIAPH3 diaphanous-related formin 3 -0.893872
DUSP23 dual specificity phosphatase 23 -0.89268
CFAP44 cilia and flagella associated protein 44 -0.890879
PGLS 6-phosphogluconolactonase -0.888183
ZNF7 zinc finger protein 7 -0.887883
MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 -0.886123
RPE ribulose-5-phosphate-3-epimerase -0.884435
IL17RC interleukin 17 receptor C -0.884262
ADSL adenylosuccinate lyase -0.882866
LOC284837 -0.882457
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 -0.882154
TMEM68 transmembrane protein 68 -0.88089
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.880069
FANCG Fanconi anemia, complementation group G -0.8783
FBXL6 F-box and leucine-rich repeat protein 6 -0.877762
PPP1R32 protein phosphatase 1, regulatory subunit 32 -0.877063
EAF2 ELL associated factor 2 -0.876941
CEACAM7 carcinoembryonic antigen-related cell adhesion molecule 7 -0.876813
ZNF768 zinc finger protein 768 -0.875906
KDM5D lysine (K)-specific demethylase 5D -0.8753
ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 -0.872896
S100P S100 calcium binding protein P -0.871882
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough -0.867947
SLC18B1 solute carrier family 18, subfamily B, member 1 -0.867821
CXCR5 chemokine (C-X-C motif) receptor 5 -0.86734
CYHR1 cysteine/histidine-rich 1 -0.867148
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) -0.866756
PCDH1 protocadherin 1 -0.866474
TLCD1 TLC domain containing 1 -0.865562
BOC BOC cell adhesion associated, oncogene regulated -0.86494
PTCH2 patched 2 -0.864175
STK17B serine/threonine kinase 17b -0.863516
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.862681
USP9Y ubiquitin specific peptidase 9, Y-linked -0.86243
UCN urocortin -0.862385
ZNF77 zinc finger protein 77 -0.861885
WDR25 WD repeat domain 25 -0.861418
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.861067
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2 -0.857355
WDR73 WD repeat domain 73 -0.856756
WDR13 WD repeat domain 13 -0.854557
ASXL1 additional sex combs like transcriptional regulator 1 -0.854398
MBD3 methyl-CpG binding domain protein 3 -0.854047
PIGQ phosphatidylinositol glycan anchor biosynthesis, class Q -0.853298
TET3 tet methylcytosine dioxygenase 3 -0.853011
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.852194
FOSL1 FOS-like antigen 1 -0.851568
DTX3 deltex 3, E3 ubiquitin ligase -0.851561
TMUB1 transmembrane and ubiquitin-like domain containing 1 -0.850871
MAPK15 mitogen-activated protein kinase 15 -0.849874
LYPLA2P1 lysophospholipase II pseudogene 1 -0.849589
CCL4 chemokine (C-C motif) ligand 4 -0.847767
PGLYRP2 peptidoglycan recognition protein 2 -0.847633
FBXO6 F-box protein 6 -0.842885
CMTM4 CKLF-like MARVEL transmembrane domain containing 4 -0.839848
TTI1 TELO2 interacting protein 1 -0.839844
TXNDC11 thioredoxin domain containing 11 -0.83982
ZNF395 zinc finger protein 395 -0.835952
CDK17 cyclin-dependent kinase 17 -0.834869
RGS12 regulator of G-protein signaling 12 -0.831826
C19ORF68 chromosome 19 open reading frame 68 -0.830782
GSTM2 glutathione S-transferase mu 2 (muscle) -0.830088
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 -0.829989
TSTD1 thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 -0.829774
STK19 serine/threonine kinase 19 -0.829544
ABHD17C abhydrolase domain containing 17C -0.827687
EMC8 ER membrane protein complex subunit 8 -0.826101
LY6E lymphocyte antigen 6 complex, locus E -0.825647
TTYH3 tweety family member 3 -0.825365
ZNF549 zinc finger protein 549 -0.824147