pneumonia Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A lung disease that involves lung parenchyma or alveolar inflammation and abnormal alveolar filling with fluid (consolidation and exudation). It results from a variety of causes including infection with bacteria, viruses, fungi or parasites, and chemical or physical injury to the lungs. It is accompanied by fever, chills, cough, and difficulty in breathing. (Human Disease Ontology, DOID_552)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:552
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Genes

55 genes associated with the disease pneumonia in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
TERT telomerase reverse transcriptase 0.624472
AGBL1 ATP/GTP binding protein-like 1 0.484681
CRACR2A calcium release activated channel regulator 2A 0.476572
CD53 CD53 molecule 0.476572
FREM2 FRAS1 related extracellular matrix protein 2 0.473391
MCPH1 microcephalin 1 0.472092
TTC7B tetratricopeptide repeat domain 7B 0.470932
MCM5 minichromosome maintenance complex component 5 0.467211
NKAIN2 Na+/K+ transporting ATPase interacting 2 0.466981
SPAG16 sperm associated antigen 16 0.464815
CAMKK1 calcium/calmodulin-dependent protein kinase kinase 1, alpha 0.464111
PPCDC phosphopantothenoylcysteine decarboxylase 0.462958
MTCL1 microtubule crosslinking factor 1 0.460072
HDAC9 histone deacetylase 9 0.459891
ELL elongation factor RNA polymerase II 0.458347
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.458115
CPNE9 copine family member IX 0.458027
GNG4 guanine nucleotide binding protein (G protein), gamma 4 0.458027
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.457931
GPR156 G protein-coupled receptor 156 0.457555
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.455449
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.454153
NID1 nidogen 1 0.453794
OBP2A odorant binding protein 2A 0.453375
ELMO1 engulfment and cell motility 1 0.453002
APBB1IP amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 0.452573
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 0.451203
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.450811
MPP4 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 0.45036
SEC16B SEC16 homolog B (S. cerevisiae) 0.449887
P2RY2 purinergic receptor P2Y, G-protein coupled, 2 0.449557
SV2B synaptic vesicle glycoprotein 2B 0.447822
FHIT fragile histidine triad 0.447102
APLP2 amyloid beta (A4) precursor-like protein 2 0.447102
CHST8 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 0.446933
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 0.44609
RBM26 RNA binding motif protein 26 0.445645
CCDC67 coiled-coil domain containing 67 0.444937
C2ORF88 chromosome 2 open reading frame 88 0.444667
MACROD2 MACRO domain containing 2 0.444401
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene 0.444282
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.443999
CHRNG cholinergic receptor, nicotinic, gamma (muscle) 0.443424
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3 0.443067
AKR1C3 aldo-keto reductase family 1, member C3 0.442858
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase 0.441758
PARVA parvin, alpha 0.441498
SLIT2 slit homolog 2 (Drosophila) 0.441075
MGAT4C MGAT4 family, member C 0.44097
MSI2 musashi RNA-binding protein 2 0.440661
FNDC8 fibronectin type III domain containing 8 0.440237
RBM26-AS1 RBM26 antisense RNA 1 0.440217
CTNND2 catenin (cadherin-associated protein), delta 2 0.440098
IL36B interleukin 36, beta 0.439863
DNAH8 dynein, axonemal, heavy chain 8 0.438748