plastid-encoded plastid rna polymerase complex b Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-B is distinguished from PEP-A by its sensitivity to the antibiotic rifampicin. PEP-B is found in both etioplasts and chloroplasts, but is the predominate form in etioplasts. It forms the core of the PEP-A form; the conversion from PEP-B to PEP-A occurs during chloroplast maturation. (Gene Ontology, GO_0000344)
Similar Terms
Downloads & Tools

Genes

88 proteins co-occuring with the plastid-encoded plastid rna polymerase complex b cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LDHB lactate dehydrogenase B 1.97415
PGM1 phosphoglucomutase 1 1.63182
PEPD peptidase D 1.62531
PGM2 phosphoglucomutase 2 1.58564
ACP1 acid phosphatase 1, soluble 1.53387
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) 1.42429
LDHA lactate dehydrogenase A 1.24288
PGM3 phosphoglucomutase 3 1.23192
MPI mannose phosphate isomerase 1.14239
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 1.0423
PGD phosphogluconate dehydrogenase 1.0398
AK1 adenylate kinase 1 1.0238
LAP3 leucine aminopeptidase 3 1.00005
GLO1 glyoxalase I 0.961187
SORD sorbitol dehydrogenase 0.961187
OR1E1 olfactory receptor, family 1, subfamily E, member 1 0.952573
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 0.920449
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 0.913443
ENO1 enolase 1, (alpha) 0.890707
AK2 adenylate kinase 2 0.890707
AK3 adenylate kinase 3 0.886551
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3 0.846991
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 0.829089
ESD esterase D 0.817616
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.732422
PTER phosphotriesterase related 0.725705
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2 0.700423
INPP5J inositol polyphosphate-5-phosphatase J 0.648291
PNP purine nucleoside phosphorylase 0.636723
PEBP1 phosphatidylethanolamine binding protein 1 0.626483
OR1J2 olfactory receptor, family 1, subfamily J, member 2 0.625632
GLA galactosidase, alpha 0.588875
HEXA hexosaminidase A (alpha polypeptide) 0.584268
GBA2 glucosidase, beta (bile acid) 2 0.574662
GSR glutathione reductase 0.563847
CKB creatine kinase, brain 0.562187
PIGC phosphatidylinositol glycan anchor biosynthesis, class C 0.5568
SART1 squamous cell carcinoma antigen recognized by T cells 0.553905
GPI glucose-6-phosphate isomerase 0.537827
FUCA1 fucosidase, alpha-L- 1, tissue 0.53454
AFM afamin 0.507163
HAGH hydroxyacylglutathione hydrolase 0.500258
PAX9 paired box 9 0.499042
PRTN3 proteinase 3 0.488923
PKM pyruvate kinase, muscle 0.465198
ADK adenosine kinase 0.448848
GUK1 guanylate kinase 1 0.444085
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.439728
MDH1 malate dehydrogenase 1, NAD (soluble) 0.43696
ACO2 aconitase 2, mitochondrial 0.427891
HBD hemoglobin, delta 0.419644
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 0.418468
LALBA lactalbumin, alpha- 0.40714
A2M alpha-2-macroglobulin 0.40247
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.396648
TPI1 triosephosphate isomerase 1 0.393936
TGM1 transglutaminase 1 0.392775
GANC glucosidase, alpha; neutral C 0.377738
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) 0.376202
SCN2A sodium channel, voltage gated, type II alpha subunit 0.373132
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.362804
GPT glutamic-pyruvate transaminase (alanine aminotransferase) 0.346829
ENO2 enolase 2 (gamma, neuronal) 0.344178
ABHD14A abhydrolase domain containing 14A 0.336619
PGK1 phosphoglycerate kinase 1 0.334356
RAP1B RAP1B, member of RAS oncogene family 0.329084
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.316708
HBB hemoglobin, beta 0.309986
CFB complement factor B 0.289569
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 0.28846
GPANK1 G patch domain and ankyrin repeats 1 0.285876
FGF19 fibroblast growth factor 19 0.285138
FH fumarate hydratase 0.26166
ACO1 aconitase 1, soluble 0.251476
STAB2 stabilin 2 0.248216
ADA adenosine deaminase 0.240276
CA2 carbonic anhydrase II 0.202684
SOD2 superoxide dismutase 2, mitochondrial 0.190495
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 0.188905
GC group-specific component (vitamin D binding protein) 0.18859
MMP11 matrix metallopeptidase 11 0.183935
ACP2 acid phosphatase 2, lysosomal 0.178588
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.174087
DSPP dentin sialophosphoprotein 0.168598
GRN granulin 0.168101
G6PD glucose-6-phosphate dehydrogenase 0.163641
B2M beta-2-microglobulin 0.158502
HPX hemopexin 0.157218