pilocytic astrocytoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description An astrocytoma that is characterized by cells that look like fibers when viewed under a microscope and is located_in the brain. (Human Disease Ontology, DOID_4851)
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Genes

125 genes co-occuring with the disease pilocytic astrocytoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
KIAA1549 KIAA1549 2.2095
NF1 neurofibromin 1 1.76864
FAM131B family with sequence similarity 131, member B 1.59385
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 1.48735
GFAP glial fibrillary acidic protein 1.12319
OLIG2 oligodendrocyte lineage transcription factor 2 1.10468
TP53 tumor protein p53 1.0774
TUBG2 tubulin, gamma 2 1.07026
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 1.04756
RAB3IP RAB3A interacting protein 0.999503
DOCK6 dedicator of cytokinesis 6 0.985164
XRCC6BP1 XRCC6 binding protein 1 0.97296
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 0.957033
NF2 neurofibromin 2 (merlin) 0.890898
SOX10 SRY (sex determining region Y)-box 10 0.880243
CALY calcyon neuron-specific vesicular protein 0.826999
CDKN2A cyclin-dependent kinase inhibitor 2A 0.799923
SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 0.798282
SYP synaptophysin 0.785574
DCTN2 dynactin 2 (p50) 0.776159
MATN2 matrilin 2 0.76431
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.757786
DOCK2 dedicator of cytokinesis 2 0.750457
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.748017
FUBP1 far upstream element (FUSE) binding protein 1 0.733811
PTEN phosphatase and tensin homolog 0.725311
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 0.703536
YEATS4 YEATS domain containing 4 0.699919
BCL7A B-cell CLL/lymphoma 7A 0.683892
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.683493
ALDH1L1 aldehyde dehydrogenase 1 family, member L1 0.674315
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 0.674315
PBX3 pre-B-cell leukemia homeobox 3 0.641827
ZBTB20 zinc finger and BTB domain containing 20 0.641827
CNTNAP1 contactin associated protein 1 0.640251
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.637889
APOD apolipoprotein D 0.630027
FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide 0.621792
SH3GL2 SH3-domain GRB2-like 2 0.60147
SCGN secretagogin, EF-hand calcium binding protein 0.60147
RAP1B RAP1B, member of RAS oncogene family 0.545868
QKI QKI, KH domain containing, RNA binding 0.536183
SOX6 SRY (sex determining region Y)-box 6 0.531154
OLIG1 oligodendrocyte transcription factor 1 0.521502
NFIC nuclear factor I/C (CCAAT-binding transcription factor) 0.513802
RAMP3 receptor (G protein-coupled) activity modifying protein 3 0.513417
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.511496
FABP7 fatty acid binding protein 7, brain 0.498467
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.472982
NTM neurotrimin 0.471846
MIR25 microRNA 25 0.461261
ERBB3 erb-b2 receptor tyrosine kinase 3 0.45447
METAP2 methionyl aminopeptidase 2 0.451454
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 0.443923
RAMP2 receptor (G protein-coupled) activity modifying protein 2 0.433772
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.421016
SCRT1 scratch family zinc finger 1 0.419517
DOCK8 dedicator of cytokinesis 8 0.416147
HVCN1 hydrogen voltage gated channel 1 0.399707
IQGAP1 IQ motif containing GTPase activating protein 1 0.385936
MGMT O-6-methylguanine-DNA methyltransferase 0.382223
FRS2 fibroblast growth factor receptor substrate 2 0.379256
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.374438
AGO2 argonaute RISC catalytic component 2 0.371107
FCGRT Fc fragment of IgG, receptor, transporter, alpha 0.362978
KDR kinase insert domain receptor 0.362239
H3F3A H3 histone, family 3A 0.360764
H3F3B H3 histone, family 3B (H3.3B) 0.360764
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.352291
TYROBP TYRO protein tyrosine kinase binding protein 0.348614
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.348246
CDK4 cyclin-dependent kinase 4 0.336876
CDC25B cell division cycle 25B 0.334315
CRK v-crk avian sarcoma virus CT10 oncogene homolog 0.331025
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 0.325187
FMOD fibromodulin 0.32373
BSG basigin (Ok blood group) 0.320454
CALCRL calcitonin receptor-like 0.316819
HRAS Harvey rat sarcoma viral oncogene homolog 0.305226
RB1 retinoblastoma 1 0.302337
DCLK3 doublecortin-like kinase 3 0.298731
ONECUT2 one cut homeobox 2 0.295132
RANBP9 RAN binding protein 9 0.291539
DAXX death-domain associated protein 0.28831
HIC1 hypermethylated in cancer 1 0.287235
MEGF6 multiple EGF-like-domains 6 0.281868
NFIB nuclear factor I/B 0.279011
MLX MLX, MAX dimerization protein 0.277465
SOX2 SRY (sex determining region Y)-box 2 0.273664
DMBT1 deleted in malignant brain tumors 1 0.271174
FGD1 FYVE, RhoGEF and PH domain containing 1 0.270464
VEGFA vascular endothelial growth factor A 0.270464
FLT1 fms-related tyrosine kinase 1 0.270108
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.264431
RPTOR regulatory associated protein of MTOR, complex 1 0.254536
CD276 CD276 molecule 0.251484
CRLF1 cytokine receptor-like factor 1 0.245396
PCNA proliferating cell nuclear antigen 0.245046
FOXG1 forkhead box G1 0.242945
MIR210 microRNA 210 0.237706
A2M alpha-2-macroglobulin 0.233878
FGFR1 fibroblast growth factor receptor 1 0.226607
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.219398
MCM2 minichromosome maintenance complex component 2 0.218374
HLA-DPB1 major histocompatibility complex, class II, DP beta 1 0.204263
NR2E1 nuclear receptor subfamily 2, group E, member 1 0.201308
NES nestin 0.19742
CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 0.190168
RICTOR RPTOR independent companion of MTOR, complex 2 0.178682
TGM1 transglutaminase 1 0.172799
CFH complement factor H 0.168854
PTN pleiotrophin 0.168148
MAPK1 mitogen-activated protein kinase 1 0.165001
CD68 CD68 molecule 0.163317
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.160761
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 0.15948
MBP myelin basic protein 0.145348
FGF19 fibroblast growth factor 19 0.144428
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 0.143871
CLU clusterin 0.14377
SOX9 SRY (sex determining region Y)-box 9 0.143747
CST3 cystatin C 0.139317
CD44 CD44 molecule (Indian blood group) 0.137779
ENO2 enolase 2 (gamma, neuronal) 0.136762
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.134833