pigment Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

193 genes co-occuring with the biological term pigment in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary)
ADORA1 adenosine A1 receptor
ADORA2A adenosine A2a receptor
ADORA3 adenosine A3 receptor
AGER advanced glycosylation end product-specific receptor
AHR aryl hydrocarbon receptor
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
ALB albumin
ANOS1 anosmin 1
APC adenomatous polyposis coli
APOE apolipoprotein E
AQP3 aquaporin 3 (Gill blood group)
ASCL1 achaete-scute family bHLH transcription factor 1
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
BCL2L1 BCL2-like 1
BCO1 beta-carotene oxygenase 1
BCO2 beta-carotene oxygenase 2
BDKRB1 bradykinin receptor B1
BDKRB2 bradykinin receptor B2
BEST1 bestrophin 1
BMP4 bone morphogenetic protein 4
BPI bactericidal/permeability-increasing protein
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP5 caspase 5, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CD44 CD44 molecule (Indian blood group)
CD46 CD46 molecule, complement regulatory protein
CD59 CD59 molecule, complement regulatory protein
CDC14A cell division cycle 14A
CDC14B cell division cycle 14B
CFB complement factor B
CFH complement factor H
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHRM1 cholinergic receptor, muscarinic 1
CLDN5 claudin 5
CNR1 cannabinoid receptor 1 (brain)
CNR2 cannabinoid receptor 2 (macrophage)
CNTF ciliary neurotrophic factor
COL1A1 collagen, type I, alpha 1
CREB3L1 cAMP responsive element binding protein 3-like 1
CST3 cystatin C
CXCL8 chemokine (C-X-C motif) ligand 8
CYGB cytoglobin
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
DCT dopachrome tautomerase
DRD2 dopamine receptor D2
EDN1 endothelin 1
EDNRA endothelin receptor type A
EDNRB endothelin receptor type B
EPAS1 endothelial PAS domain protein 1
EPO erythropoietin
FABP5 fatty acid binding protein 5 (psoriasis-associated)
FBLN2 fibulin 2
FCRLA Fc receptor-like A
FGF7 fibroblast growth factor 7
FGFR1 fibroblast growth factor receptor 1
FGFR2 fibroblast growth factor receptor 2
FLT1 fms-related tyrosine kinase 1
FOXN1 forkhead box N1
GLP1R glucagon-like peptide 1 receptor
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GPR39 G protein-coupled receptor 39
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HGF hepatocyte growth factor (hepapoietin A; scatter factor)
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HMOX1 heme oxygenase 1
HP haptoglobin
HTRA1 HtrA serine peptidase 1
ICAM1 intercellular adhesion molecule 1
IDO1 indoleamine 2,3-dioxygenase 1
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP3 insulin-like growth factor binding protein 3
IL17A interleukin 17A
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL33 interleukin 33
IL6 interleukin 6
IL6R interleukin 6 receptor
ILK integrin-linked kinase
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
ITGA9 integrin, alpha 9
JAK2 Janus kinase 2
JUN jun proto-oncogene
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KDR kinase insert domain receptor
KL klotho
LEP leptin
LGALS1 lectin, galactoside-binding, soluble, 1
LINC00575 long intergenic non-protein coding RNA 575
LOXL1 lysyl oxidase-like 1
LTBP1 latent transforming growth factor beta binding protein 1
MAPK14 mitogen-activated protein kinase 14
MAPK8 mitogen-activated protein kinase 8
MBTPS1 membrane-bound transcription factor peptidase, site 1
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MERTK MER proto-oncogene, tyrosine kinase
MIR155 microRNA 155
MIR9-1 microRNA 9-1
MIR93 microRNA 93
MITF microphthalmia-associated transcription factor
MMP2 matrix metallopeptidase 2
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MSN moesin
MTTP microsomal triglyceride transfer protein
MYO7A myosin VIIA
NF2 neurofibromin 2 (merlin)
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NGB neuroglobin
NLRP3 NLR family, pyrin domain containing 3
NOS2 nitric oxide synthase 2, inducible
NOTCH1 notch 1
OCA2 oculocutaneous albinism II
OPN1SW opsin 1 (cone pigments), short-wave-sensitive
OPN4 opsin 4
OPTC opticin
OPTN optineurin
ORAI1 ORAI calcium release-activated calcium modulator 1
ORM1 orosomucoid 1
OTX1 orthodenticle homeobox 1
OTX2 orthodenticle homeobox 2
PADI2 peptidyl arginine deiminase, type II
PARK7 parkinson protein 7
PARP1 poly (ADP-ribose) polymerase 1
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDPN podoplanin
PHB prohibitin
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLAU plasminogen activator, urokinase
POMC proopiomelanocortin
PPARA peroxisome proliferator-activated receptor alpha
PPARD peroxisome proliferator-activated receptor delta
PPARG peroxisome proliferator-activated receptor gamma
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PRDX3 peroxiredoxin 3
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTX3 pentraxin 3, long
RAB27A RAB27A, member RAS oncogene family
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAI14 retinoic acid induced 14
RBP3 retinol binding protein 3, interstitial
RGR retinal G protein coupled receptor
RHOA ras homolog family member A
RLBP1 retinaldehyde binding protein 1
RPE65 retinal pigment epithelium-specific protein 65kDa
RPSA ribosomal protein SA
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC24A5 solute carrier family 24 (sodium/potassium/calcium exchanger), member 5
SLC39A2 solute carrier family 39 (zinc transporter), member 2
SLC39A4 solute carrier family 39 (zinc transporter), member 4
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SNAI1 snail family zinc finger 1
SOX10 SRY (sex determining region Y)-box 10
SOX9 SRY (sex determining region Y)-box 9
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SQSTM1 sequestosome 1
SRPK1 SRSF protein kinase 1
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
STIM1 stromal interaction molecule 1
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TGFB1 transforming growth factor, beta 1
TGFB2 transforming growth factor, beta 2
TH tyrosine hydroxylase
THBS1 thrombospondin 1
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP3 TIMP metallopeptidase inhibitor 3
TLR4 toll-like receptor 4
TNF tumor necrosis factor
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A
TNFSF12 tumor necrosis factor (ligand) superfamily, member 12
TRPV5 transient receptor potential cation channel, subfamily V, member 5
TRPV6 transient receptor potential cation channel, subfamily V, member 6
TUB tubby bipartite transcription factor
TULP1 tubby like protein 1
VEGFA vascular endothelial growth factor A
VIP vasoactive intestinal peptide