pigment granule Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes. (Gene Ontology, GO_0048770)
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Genes

58 proteins localized to the pigment granule cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HPS4 Hermansky-Pudlak syndrome 4 0.663342
PDIA3 protein disulfide isomerase family A, member 3 0.663342
PDIA4 protein disulfide isomerase family A, member 4 0.663342
PDIA6 protein disulfide isomerase family A, member 6 0.663342
RAB1A RAB1A, member RAS oncogene family 0.663342
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.663342
SDCBP syndecan binding protein (syntenin) 0.663342
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.663342
CD63 CD63 molecule 0.663342
PMEL premelanosome protein 0.663342
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.663342
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide 0.663342
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.663342
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 0.663342
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 0.663342
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.663342
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 0.663342
RPN1 ribophorin I 0.663342
HSPA8 heat shock 70kDa protein 8 0.663342
PDCD6IP programmed cell death 6 interacting protein 0.663342
RAB35 RAB35, member RAS oncogene family 0.663342
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.663342
MLANA melan-A 0.663342
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.663342
ANXA11 annexin A11 0.663342
TPP1 tripeptidyl peptidase I 0.663342
FLOT1 flotillin 1 0.663342
GNA13 guanine nucleotide binding protein (G protein), alpha 13 0.663342
RAN RAN, member RAS oncogene family 0.663342
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.663342
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.663342
PPIB peptidylprolyl isomerase B (cyclophilin B) 0.663342
TMEM33 transmembrane protein 33 0.663342
CTSD cathepsin D 0.663342
OCA2 oculocutaneous albinism II 0.663342
RAB27A RAB27A, member RAS oncogene family 0.663342
GCHFR GTP cyclohydrolase I feedback regulator 0.663342
GPR143 G protein-coupled receptor 143 0.663342
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 0.663342
CANX calnexin 0.663342
GPNMB glycoprotein (transmembrane) nmb 0.663342
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.663342
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 0.663342
ERP29 endoplasmic reticulum protein 29 0.663342
SLC24A5 solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 0.663342
DCT dopachrome tautomerase 0.237908
TYR tyrosinase 0.237908
SYTL2 synaptotagmin-like 2 0.237908
RAB38 RAB38, member RAS oncogene family 0.237908
RAB32 RAB32, member RAS oncogene family 0.237908
SYTL1 synaptotagmin-like 1 0.237908
TH tyrosine hydroxylase 0.237908
TYRP1 tyrosinase-related protein 1 0.237908
RAB17 RAB17, member RAS oncogene family 0.237908
LAMP1 lysosomal-associated membrane protein 1 0.03318
MYO7A myosin VIIA 0.03318
MYRIP myosin VIIA and Rab interacting protein 0.03318
MYO5A myosin VA (heavy chain 12, myoxin) 0.03318