periodontitis Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0000704
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Genes

44 genes associated with the periodontitis phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
GLT6D1 glycosyltransferase 6 domain containing 1 1.27347
ADGRE1 adhesion G protein-coupled receptor E1 1.05869
NKAIN2 Na+/K+ transporting ATPase interacting 2 1.05869
BIRC5 baculoviral IAP repeat containing 5 1.04365
LBP lipopolysaccharide binding protein 1.00059
WDR73 WD repeat domain 73 1.00059
TIMP2 TIMP metallopeptidase inhibitor 2 1.00059
THSD4 thrombospondin, type I, domain containing 4 1.00059
IGF2R insulin-like growth factor 2 receptor 1.00059
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.979167
ACTN2 actinin, alpha 2 0.969142
CSMD1 CUB and Sushi multiple domains 1 0.969142
ST20 suppressor of tumorigenicity 20 0.942765
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.942765
ACTN1 actinin, alpha 1 0.942765
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.942765
SCN2A sodium channel, voltage gated, type II alpha subunit 0.919744
LRP1B low density lipoprotein receptor-related protein 1B 0.919744
ZNF579 zinc finger protein 579 0.919744
ETNK2 ethanolamine kinase 2 0.919744
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8 0.919744
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16 0.919744
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.919744
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 0.919744
TGIF1 TGFB-induced factor homeobox 1 0.919744
CCDC13 coiled-coil domain containing 13 0.899912
NLGN1 neuroligin 1 0.899912
NPAP1 nuclear pore associated protein 1 0.899912
FAM126A family with sequence similarity 126, member A 0.899912
KDM4B lysine (K)-specific demethylase 4B 0.899912
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.882984
GRIK1 glutamate receptor, ionotropic, kainate 1 0.882984
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.882984
GPN1 GPN-loop GTPase 1 0.868241
IQSEC1 IQ motif and Sec7 domain 1 0.865306
FOXA1 forkhead box A1 0.865175
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.855449
ITGA8 integrin, alpha 8 0.855449
PTPRT protein tyrosine phosphatase, receptor type, T 0.855449
CDH13 cadherin 13 0.855449
FAM135B family with sequence similarity 135, member B 0.855449
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 0.855449
HLA-DOA major histocompatibility complex, class II, DO alpha 0.855449
STARD8 StAR-related lipid transfer (START) domain containing 8 0.848219