pericardial effusion Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A pericardium disease that is characterized by an abnormal accumulation of fluid in the pericardial cavity. (Human Disease Ontology, DOID_118)
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Genes

159 genes co-occuring with the disease pericardial effusion in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
ADA adenosine deaminase 1.21738
NPPA natriuretic peptide A 1.12825
IPP intracisternal A particle-promoted polypeptide 1.10048
TNNI3 troponin I type 3 (cardiac) 1.03114
PWP1 PWP1 homolog (S. cerevisiae) 1.02355
CRP C-reactive protein, pentraxin-related 1.02187
PLAT plasminogen activator, tissue 0.952856
CD4 CD4 molecule 0.889258
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.887208
ARR3 arrestin 3, retinal (X-arrestin) 0.872462
TNNT2 troponin T type 2 (cardiac) 0.865912
APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 0.849536
ALG9 ALG9, alpha-1,2-mannosyltransferase 0.816745
ALG8 ALG8, alpha-1,3-glucosyltransferase 0.811411
PMM2 phosphomannomutase 2 0.788033
ALB albumin 0.783116
KIAA0101 KIAA0101 0.754527
REN renin 0.74883
F2 coagulation factor II (thrombin) 0.711183
ACADVL acyl-CoA dehydrogenase, very long chain 0.695504
ACE angiotensin I converting enzyme 0.678302
RIN3 Ras and Rab interactor 3 0.644586
AVP arginine vasopressin 0.638282
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 0.625711
CD19 CD19 molecule 0.596012
F8 coagulation factor VIII, procoagulant component 0.592506
NOTCH1 notch 1 0.559062
CIRBP cold inducible RNA binding protein 0.537344
RAP2A RAP2A, member of RAS oncogene family 0.520346
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 0.501909
TRIM21 tripartite motif containing 21 0.499997
GIN1 gypsy retrotransposon integrase 1 0.492359
SS18 synovial sarcoma translocation, chromosome 18 0.487027
CD34 CD34 molecule 0.470332
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 0.466928
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1 0.461261
JUP junction plakoglobin 0.459751
PRG4 proteoglycan 4 0.454847
QKI QKI, KH domain containing, RNA binding 0.452962
EMP2 epithelial membrane protein 2 0.446558
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.443171
CD5 CD5 molecule 0.435275
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 0.427765
GCLC glutamate-cysteine ligase, catalytic subunit 0.427015
INPP5A inositol polyphosphate-5-phosphatase, 40kDa 0.425514
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 0.42289
SLC29A3 solute carrier family 29 (equilibrative nucleoside transporter), member 3 0.416896
KCNK6 potassium channel, two pore domain subfamily K, member 6 0.415773
ZFPM2 zinc finger protein, FOG family member 2 0.409787
CD79A CD79a molecule, immunoglobulin-associated alpha 0.406425
LAX1 lymphocyte transmembrane adaptor 1 0.405305
SCYL1 SCY1-like 1 (S. cerevisiae) 0.400453
DCTD dCMP deaminase 0.394118
SHOC2 soc-2 suppressor of clear homolog (C. elegans) 0.385565
FIP1L1 factor interacting with PAPOLA and CPSF1 0.384079
IL2RA interleukin 2 receptor, alpha 0.384079
NPPB natriuretic peptide B 0.383708
ERF Ets2 repressor factor 0.383337
GCM2 glial cells missing homolog 2 (Drosophila) 0.378514
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.377031
CD68 CD68 molecule 0.373328
SHD Src homology 2 domain containing transforming protein D 0.371477
HRC histidine rich calcium binding protein 0.370737
ALX4 ALX homeobox 4 0.369997
OCM2 oncomodulin 2 0.369258
RAET1E retinoic acid early transcript 1E 0.36704
POU1F1 POU class 1 homeobox 1 0.360026
PER3 period circadian clock 3 0.359289
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11 0.352659
OCM oncomodulin 0.351555
FEV FEV (ETS oncogene family) 0.339806
TBCE tubulin folding cofactor E 0.337608
PER1 period circadian clock 1 0.332121
AFP alpha-fetoprotein 0.332121
CLIP1 CAP-GLY domain containing linker protein 1 0.320454
ENO2 enolase 2 (gamma, neuronal) 0.316819
GJC1 gap junction protein, gamma 1, 45kDa 0.316092
TF transferrin 0.30342
GPR83 G protein-coupled receptor 83 0.296931
CD38 CD38 molecule 0.295851
MPO myeloperoxidase 0.294772
CAV1 caveolin 1, caveolae protein, 22kDa 0.29118
ZFPM1 zinc finger protein, FOG family member 1 0.289386
IL2 interleukin 2 0.28831
VPREB1 pre-B lymphocyte 1 0.28616
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.284013
F3 coagulation factor III (thromboplastin, tissue factor) 0.282582
GJA5 gap junction protein, alpha 5, 40kDa 0.280796
F9 coagulation factor IX 0.280082
UBIAD1 UbiA prenyltransferase domain containing 1 0.266203
SLC22A18 solute carrier family 22, member 18 0.266203
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 0.258064
PAX5 paired box 5 0.258064
CD7 CD7 molecule 0.257711
ADAR adenosine deaminase, RNA-specific 0.257711
F7 coagulation factor VII (serum prothrombin conversion accelerator) 0.254888
ELL elongation factor RNA polymerase II 0.254183
BCL6 B-cell CLL/lymphoma 6 0.25207
ACSL1 acyl-CoA synthetase long-chain family member 1 0.249608
VEGFA vascular endothelial growth factor A 0.248905
SST somatostatin 0.245396
FIGF c-fos induced growth factor (vascular endothelial growth factor D) 0.243295
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5 0.242595
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.239799
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.232836
ETV3 ets variant 3 0.232836
HBA2 hemoglobin, alpha 2 0.231102
MAP9 microtubule-associated protein 9 0.230755
CD33 CD33 molecule 0.230063
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) 0.228333
ITLN1 intelectin 1 (galactofuranose binding) 0.220766
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 0.220424
IMMT inner membrane protein, mitochondrial 0.218374
IL6 interleukin 6 0.216332
HAS2 hyaluronan synthase 2 0.206913
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.20658
LST1 leukocyte specific transcript 1 0.20658
PIDD1 p53-induced death domain protein 1 0.204593
USF2 upstream transcription factor 2, c-fos interacting 0.200656
TARS threonyl-tRNA synthetase 0.200331
IGHV1-2 immunoglobulin heavy variable 1-2 0.197742
ALPPL2 alkaline phosphatase, placental-like 2 0.193915
ALPP alkaline phosphatase, placental 0.1936
ALPL alkaline phosphatase, liver/bone/kidney 0.192971
PER2 period circadian clock 2 0.192657
DSPP dentin sialophosphoprotein 0.190786
DLL1 delta-like 1 (Drosophila) 0.189244
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.18621
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.185016
NMT1 N-myristoyltransferase 1 0.183541
SSX1 synovial sarcoma, X breakpoint 1 0.178403
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.175411
ICAM2 intercellular adhesion molecule 2 0.174093
CAV2 caveolin 2 0.171036
WIPF2 WAS/WASL interacting protein family, member 2 0.167915
GP2 glycoprotein 2 (zymogen granule membrane) 0.166768
PAX2 paired box 2 0.165874
TLR8 toll-like receptor 8 0.164571
PRTN3 proteinase 3 0.161331
MLANA melan-A 0.161139
HAND2 heart and neural crest derivatives expressed 2 0.146277
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 0.145627
FBN1 fibrillin 1 0.144305
F12 coagulation factor XII (Hageman factor) 0.144281
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 0.143747
TBX1 T-box 1 0.143267
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2 0.142163
F13A1 coagulation factor XIII, A1 polypeptide 0.142145
ARRB1 arrestin, beta 1 0.142097
TGM4 transglutaminase 4 0.141373
FLCN folliculin 0.139925
IL1RN interleukin 1 receptor antagonist 0.138373
DCT dopachrome tautomerase 0.138334
HIST2H2AC histone cluster 2, H2ac 0.137835
HIST2H2AA4 histone cluster 2, H2aa4 0.137821
HIST2H2AA3 histone cluster 2, H2aa3 0.137821
HSPG2 heparan sulfate proteoglycan 2 0.136631
MLX MLX, MAX dimerization protein 0.135375
PNP purine nucleoside phosphorylase 0.135238