pattern specification process Gene Set

Dataset GO Biological Process Annotations
Category structural or functional annotations
Type biological process
Description Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate. (Gene Ontology, GO_0007389)
External Link http://amigo.geneontology.org/amigo/term/GO:0007389
Similar Terms
Downloads & Tools

Genes

379 genes participating in the pattern specification process biological process from the curated GO Biological Process Annotations dataset.

Symbol Name
ABI1 abl-interactor 1
ACD adrenocortical dysplasia homolog (mouse)
ACVR1 activin A receptor, type I
ACVR2A activin A receptor, type IIA
ACVR2B activin A receptor, type IIB
AHI1 Abelson helper integration site 1
AIDA axin interactor, dorsalization associated
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALX1 ALX homeobox 1
ALX3 ALX homeobox 3
ALX4 ALX homeobox 4
APC adenomatous polyposis coli
ARC activity-regulated cytoskeleton-associated protein
ARL13B ADP-ribosylation factor-like 13B
ARL6 ADP-ribosylation factor-like 6
ARMC4 armadillo repeat containing 4
ASPH aspartate beta-hydroxylase
ATM ATM serine/threonine kinase
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
AURKA aurora kinase A
AXIN1 axin 1
AXIN2 axin 2
BARX1 BARX homeobox 1
BASP1 brain abundant, membrane attached signal protein 1
BBS7 Bardet-Biedl syndrome 7
BCOR BCL6 corepressor
BHLHE22 basic helix-loop-helix family, member e22
BMP2 bone morphogenetic protein 2
BMP4 bone morphogenetic protein 4
BMP5 bone morphogenetic protein 5
BMP7 bone morphogenetic protein 7
BMPR1A bone morphogenetic protein receptor, type IA
BMPR1B bone morphogenetic protein receptor, type IB
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase)
BPTF bromodomain PHD finger transcription factor
BTG2 BTG family, member 2
C2CD3 C2 calcium-dependent domain containing 3
CCDC103 coiled-coil domain containing 103
CCDC39 coiled-coil domain containing 39
CCDC40 coiled-coil domain containing 40
CDON cell adhesion associated, oncogene regulated
CDX1 caudal type homeobox 1
CDX2 caudal type homeobox 2
CDX4 caudal type homeobox 4
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2
CER1 cerberus 1, DAN family BMP antagonist
CFC1 cripto, FRL-1, cryptic family 1
CHSY1 chondroitin sulfate synthase 1
CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
COBL cordon-bleu WH2 repeat protein
COL4A1 collagen, type IV, alpha 1
CRB2 crumbs family member 2
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNNBIP1 catenin, beta interacting protein 1
CXCL12 chemokine (C-X-C motif) ligand 12
CXCR4 chemokine (C-X-C motif) receptor 4
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1
DAAM2 dishevelled associated activator of morphogenesis 2
DAND5 DAN domain family member 5, BMP antagonist
DISP1 dispatched homolog 1 (Drosophila)
DLL1 delta-like 1 (Drosophila)
DLL3 delta-like 3 (Drosophila)
DLL4 delta-like 4 (Drosophila)
DLX1 distal-less homeobox 1
DLX2 distal-less homeobox 2
DMRTA2 DMRT-like family A2
DNAAF1 dynein, axonemal, assembly factor 1
DNAH5 dynein, axonemal, heavy chain 5
DPCD deleted in primary ciliary dyskinesia homolog (mouse)
DSCAML1 Down syndrome cell adhesion molecule like 1
DUSP6 dual specificity phosphatase 6
DVL2 dishevelled segment polarity protein 2
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1
DYX1C1 dyslexia susceptibility 1 candidate 1
EDN1 endothelin 1
EDNRA endothelin receptor type A
EFNB1 ephrin-B1
EGR2 early growth response 2
EMX1 empty spiracles homeobox 1
EMX2 empty spiracles homeobox 2
EN1 engrailed homeobox 1
ENG endoglin
EOMES eomesodermin
EP300 E1A binding protein p300
EPB41L5 erythrocyte membrane protein band 4.1 like 5
ERBB4 erb-b2 receptor tyrosine kinase 4
EYA1 EYA transcriptional coactivator and phosphatase 1
FBXL15 F-box and leucine-rich repeat protein 15
FEZF1 FEZ family zinc finger 1
FEZF2 FEZ family zinc finger 2
FGF10 fibroblast growth factor 10
FGF8 fibroblast growth factor 8 (androgen-induced)
FGFR2 fibroblast growth factor receptor 2
FKBP8 FK506 binding protein 8, 38kDa
FLT1 fms-related tyrosine kinase 1
FOXA1 forkhead box A1
FOXA2 forkhead box A2
FOXB1 forkhead box B1
FOXC1 forkhead box C1
FOXC2 forkhead box C2
FOXD1 forkhead box D1
FOXF1 forkhead box F1
FOXH1 forkhead box H1
FOXJ1 forkhead box J1
FRAT1 frequently rearranged in advanced T-cell lymphomas 1
FRS2 fibroblast growth factor receptor substrate 2
FST follistatin
FUZ fuzzy planar cell polarity protein
FZD5 frizzled class receptor 5
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GAS1 growth arrest-specific 1
GATA4 GATA binding protein 4
GBX2 gastrulation brain homeobox 2
GDF11 growth differentiation factor 11
GDF2 growth differentiation factor 2
GDF3 growth differentiation factor 3
GLI1 GLI family zinc finger 1
GLI2 GLI family zinc finger 2
GLI3 GLI family zinc finger 3
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GPC3 glypican 3
GREM1 gremlin 1, DAN family BMP antagonist
GREM2 gremlin 2, DAN family BMP antagonist
GRHL3 grainyhead-like 3 (Drosophila)
GRSF1 G-rich RNA sequence binding factor 1
GSC goosecoid homeobox
GSX2 GS homeobox 2
HES5 hes family bHLH transcription factor 5
HES7 hes family bHLH transcription factor 7
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HHEX hematopoietically expressed homeobox
HHIP hedgehog interacting protein
HIPK1 homeodomain interacting protein kinase 1
HIPK2 homeodomain interacting protein kinase 2
HNF1B HNF1 homeobox B
HOXA1 homeobox A1
HOXA10 homeobox A10
HOXA11 homeobox A11
HOXA2 homeobox A2
HOXA3 homeobox A3
HOXA4 homeobox A4
HOXA5 homeobox A5
HOXA6 homeobox A6
HOXA7 homeobox A7
HOXA9 homeobox A9
HOXB1 homeobox B1
HOXB2 homeobox B2
HOXB3 homeobox B3
HOXB4 homeobox B4
HOXB5 homeobox B5
HOXB6 homeobox B6
HOXB7 homeobox B7
HOXB8 homeobox B8
HOXB9 homeobox B9
HOXC10 homeobox C10
HOXC11 homeobox C11
HOXC13 homeobox C13
HOXC4 homeobox C4
HOXC5 homeobox C5
HOXC6 homeobox C6
HOXC8 homeobox C8
HOXC9 homeobox C9
HOXD10 homeobox D10
HOXD11 homeobox D11
HOXD12 homeobox D12
HOXD13 homeobox D13
HOXD3 homeobox D3
HOXD8 homeobox D8
HOXD9 homeobox D9
HSPB11 heat shock protein family B (small), member 11
HTT huntingtin
IFT122 intraflagellar transport 122
IFT172 intraflagellar transport 172
IFT52 intraflagellar transport 52
IFT57 intraflagellar transport 57
IFT88 intraflagellar transport 88
IHH indian hedgehog
INTU inturned planar cell polarity protein
INVS inversin
IRX1 iroquois homeobox 1
IRX2 iroquois homeobox 2
IRX3 iroquois homeobox 3
IRX4 iroquois homeobox 4
ISL1 ISL LIM homeobox 1
KAT2A K(lysine) acetyltransferase 2A
KDM6A lysine (K)-specific demethylase 6A
KIF3B kinesin family member 3B
KMT2A lysine (K)-specific methyltransferase 2A
LDB1 LIM domain binding 1
LEF1 lymphoid enhancer-binding factor 1
LEFTY1 left-right determination factor 1
LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
LHX1 LIM homeobox 1
LHX2 LIM homeobox 2
LMX1B LIM homeobox transcription factor 1, beta
LRP4 low density lipoprotein receptor-related protein 4
LRP5 low density lipoprotein receptor-related protein 5
LRP6 low density lipoprotein receptor-related protein 6
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MDFI MyoD family inhibitor
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2
MEF2C myocyte enhancer factor 2C
MEGF8 multiple EGF-like-domains 8
MEOX1 mesenchyme homeobox 1
MEOX2 mesenchyme homeobox 2
MESP1 mesoderm posterior basic helix-loop-helix transcription factor 1
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
MIB1 mindbomb E3 ubiquitin protein ligase 1
MID1 midline 1
MKKS McKusick-Kaufman syndrome
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MNS1 meiosis-specific nuclear structural 1
MNX1 motor neuron and pancreas homeobox 1
MSGN1 mesogenin 1
MSX1 msh homeobox 1
MSX2 msh homeobox 2
MTF2 metal response element binding transcription factor 2
MYF5 myogenic factor 5
MYF6 myogenic factor 6 (herculin)
NANOG Nanog homeobox
NCKAP1 NCK-associated protein 1
NEUROD1 neuronal differentiation 1
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
NKX2-1 NK2 homeobox 1
NKX2-5 NK2 homeobox 5
NKX3-1 NK3 homeobox 1
NKX3-2 NK3 homeobox 2
NME7 NME/NM23 family member 7
NODAL nodal growth differentiation factor
NOG noggin
NOTCH1 notch 1
NOTCH2 notch 2
NOTCH4 notch 4
NOTO notochord homeobox
NPHP3 nephronophthisis 3 (adolescent)
NR2F1 nuclear receptor subfamily 2, group F, member 1
NR2F2 nuclear receptor subfamily 2, group F, member 2
NRARP NOTCH-regulated ankyrin repeat protein
NRG3 neuregulin 3
NRP1 neuropilin 1
NTF4 neurotrophin 4
OOEP oocyte expressed protein
OSR1 odd-skipped related transciption factor 1
OTX1 orthodenticle homeobox 1
OTX2 orthodenticle homeobox 2
OVOL2 ovo-like zinc finger 2
PALB2 partner and localizer of BRCA2
PAX1 paired box 1
PAX2 paired box 2
PAX3 paired box 3
PAX6 paired box 6
PAX7 paired box 7
PAX8 paired box 8
PBX1 pre-B-cell leukemia homeobox 1
PBX2 pre-B-cell leukemia homeobox 2
PBX3 pre-B-cell leukemia homeobox 3
PCDH8 protocadherin 8
PCGF2 polycomb group ring finger 2
PCSK5 proprotein convertase subtilisin/kexin type 5
PCSK6 proprotein convertase subtilisin/kexin type 6
PGAP1 post-GPI attachment to proteins 1
PITX2 paired-like homeodomain 2
PKD1L1 polycystic kidney disease 1 like 1
PKD2 polycystic kidney disease 2 (autosomal dominant)
PLXNA2 plexin A2
PLXND1 plexin D1
POFUT1 protein O-fucosyltransferase 1
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PROP1 PROP paired-like homeobox 1
PSEN1 presenilin 1
PSEN2 presenilin 2
PTCH1 patched 1
RAB23 RAB23, member RAS oncogene family
RARG retinoic acid receptor, gamma
RAX retina and anterior neural fold homeobox
RBM15 RNA binding motif protein 15
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RELN reelin
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
RING1 ring finger protein 1
RIPPLY1 ripply transcriptional repressor 1
RIPPLY2 ripply transcriptional repressor 2
RNF111 ring finger protein 111
RNF2 ring finger protein 2
ROR2 receptor tyrosine kinase-like orphan receptor 2
RPGRIP1L RPGRIP1-like
RTTN rotatin
SATB2 SATB homeobox 2
SCMH1 sex comb on midleg homolog 1 (Drosophila)
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2
SETDB2 SET domain, bifurcated 2
SF3B1 splicing factor 3b, subunit 1, 155kDa
SFRP1 secreted frizzled-related protein 1
SFRP2 secreted frizzled-related protein 2
SHH sonic hedgehog
SHROOM3 shroom family member 3
SIM2 single-minded family bHLH transcription factor 2
SIX1 SIX homeobox 1
SIX2 SIX homeobox 2
SIX3 SIX homeobox 3
SKI SKI proto-oncogene
SMAD1 SMAD family member 1
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMAD5 SMAD family member 5
SMAD6 SMAD family member 6
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMO smoothened, frizzled class receptor
SNAI1 snail family zinc finger 1
SOSTDC1 sclerostin domain containing 1
SOX17 SRY (sex determining region Y)-box 17
SP8 Sp8 transcription factor
SRF serum response factor (c-fos serum response element-binding transcription factor)
SSBP3 single stranded DNA binding protein 3
STC1 stanniocalcin 1
STIL SCL/TAL1 interrupting locus
STK4 serine/threonine kinase 4
SYNGAP1 synaptic Ras GTPase activating protein 1
T T, brachyury homolog (mouse)
TBR1 T-box, brain, 1
TBX1 T-box 1
TBX18 T-box 18
TBX20 T-box 20
TBX3 T-box 3
TBX5 T-box 5
TBX6 T-box 6
TCAP titin-cap
TCF15 transcription factor 15 (basic helix-loop-helix)
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TCTN1 tectonic family member 1
TDGF1 teratocarcinoma-derived growth factor 1
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TGFBR1 transforming growth factor, beta receptor 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TGIF1 TGFB-induced factor homeobox 1
TMEM107 transmembrane protein 107
TP53 tumor protein p53
TP63 tumor protein p63
TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1
TSHZ1 teashirt zinc finger homeobox 1
TTC21B tetratricopeptide repeat domain 21B
TTC8 tetratricopeptide repeat domain 8
TULP3 tubby like protein 3
UNCX UNC homeobox
VANGL2 VANGL planar cell polarity protein 2
VAX2 ventral anterior homeobox 2
VEGFA vascular endothelial growth factor A
WLS wntless Wnt ligand secretion mediator
WNT1 wingless-type MMTV integration site family, member 1
WNT2B wingless-type MMTV integration site family, member 2B
WNT3 wingless-type MMTV integration site family, member 3
WNT3A wingless-type MMTV integration site family, member 3A
WNT5A wingless-type MMTV integration site family, member 5A
WNT6 wingless-type MMTV integration site family, member 6
WNT7A wingless-type MMTV integration site family, member 7A
WNT7B wingless-type MMTV integration site family, member 7B
WNT8B wingless-type MMTV integration site family, member 8B
WT1 Wilms tumor 1
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2
YY1 YY1 transcription factor
ZBTB16 zinc finger and BTB domain containing 16
ZEB1 zinc finger E-box binding homeobox 1
ZEB2 zinc finger E-box binding homeobox 2
ZIC1 Zic family member 1
ZIC3 Zic family member 3