organic acid biosynthetic process Gene Set

Dataset GO Biological Process Annotations
Category structural or functional annotations
Type biological process
Description The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage. (Gene Ontology, GO_0016053)
External Link http://amigo.geneontology.org/amigo/term/GO:0016053
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Genes

241 genes participating in the organic acid biosynthetic process biological process from the curated GO Biological Process Annotations dataset.

Symbol Name
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11
ACACA acetyl-CoA carboxylase alpha
ACACB acetyl-CoA carboxylase beta
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACOT7 acyl-CoA thioesterase 7
ACOT8 acyl-CoA thioesterase 8
ACOX2 acyl-CoA oxidase 2, branched chain
ACSF3 acyl-CoA synthetase family member 3
ACSL3 acyl-CoA synthetase long-chain family member 3
ACSM1 acyl-CoA synthetase medium-chain family member 1
ACSM3 acyl-CoA synthetase medium-chain family member 3
ACSS1 acyl-CoA synthetase short-chain family member 1
ACSS2 acyl-CoA synthetase short-chain family member 2
ADI1 acireductone dioxygenase 1
AGMO alkylglycerol monooxygenase
AGXT alanine-glyoxylate aminotransferase
AGXT2 alanine--glyoxylate aminotransferase 2
AHCY adenosylhomocysteinase
AKR1A1 aldo-keto reductase family 1, member A1 (aldehyde reductase)
AKR1C4 aldo-keto reductase family 1, member C4
AKR1D1 aldo-keto reductase family 1, member D1
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ALDH4A1 aldehyde dehydrogenase 4 family, member A1
ALDH8A1 aldehyde dehydrogenase 8 family, member A1
ALDH9A1 aldehyde dehydrogenase 9 family, member A1
ALOX12 arachidonate 12-lipoxygenase
ALOX12B arachidonate 12-lipoxygenase, 12R type
ALOX15 arachidonate 15-lipoxygenase
ALOX15B arachidonate 15-lipoxygenase, type B
ALOX5 arachidonate 5-lipoxygenase
ALOX5AP arachidonate 5-lipoxygenase-activating protein
ALOXE3 arachidonate lipoxygenase 3
AMACR alpha-methylacyl-CoA racemase
APIP APAF1 interacting protein
ASL argininosuccinate lyase
ASNS asparagine synthetase (glutamine-hydrolyzing)
ASNSD1 asparagine synthetase domain containing 1
ASS1 argininosuccinate synthase 1
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
BAAT bile acid CoA:amino acid N-acyltransferase
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
BCAN brevican
BCAT1 branched chain amino-acid transaminase 1, cytosolic
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BGN biglycan
BHMT betaine--homocysteine S-methyltransferase
BHMT2 betaine--homocysteine S-methyltransferase 2
BRCA1 breast cancer 1, early onset
C9ORF3 chromosome 9 open reading frame 3
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
CARNS1 carnosine synthase 1
CBR4 carbonyl reductase 4
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain
CDO1 cysteine dioxygenase type 1
CH25H cholesterol 25-hydroxylase
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12
CHST14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CSPG4 chondroitin sulfate proteoglycan 4
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CTH cystathionine gamma-lyase
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1
CYP46A1 cytochrome P450, family 46, subfamily A, polypeptide 1
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
CYP8B1 cytochrome P450, family 8, subfamily B, polypeptide 1
DCN decorin
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
DEGS1 delta(4)-desaturase, sphingolipid 1
DHFR dihydrofolate reductase
DHFRL1 dihydrofolate reductase-like 1
DHRS9 dehydrogenase/reductase (SDR family) member 9
DPYD dihydropyrimidine dehydrogenase
DSE dermatan sulfate epimerase
DSEL dermatan sulfate epimerase-like
EDN1 endothelin 1
EDN2 endothelin 2
EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa
ELOVL1 ELOVL fatty acid elongase 1
ELOVL2 ELOVL fatty acid elongase 2
ELOVL3 ELOVL fatty acid elongase 3
ELOVL4 ELOVL fatty acid elongase 4
ELOVL5 ELOVL fatty acid elongase 5
ELOVL6 ELOVL fatty acid elongase 6
ELOVL7 ELOVL fatty acid elongase 7
ENOPH1 enolase-phosphatase 1
FA2H fatty acid 2-hydroxylase
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FADS3 fatty acid desaturase 3
FADS6 fatty acid desaturase 6
FAM213B family with sequence similarity 213, member B
FASN fatty acid synthase
FAXDC2 fatty acid hydroxylase domain containing 2
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FPGS folylpolyglutamate synthase
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GAMT guanidinoacetate N-methyltransferase
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GCH1 GTP cyclohydrolase 1
GGT1 gamma-glutamyltransferase 1
GGT5 gamma-glutamyltransferase 5
GGT6 gamma-glutamyltransferase 6
GGT7 gamma-glutamyltransferase 7
GGTLC1 gamma-glutamyltransferase light chain 1
GGTLC2 gamma-glutamyltransferase light chain 2
GLS glutaminase
GLS2 glutaminase 2 (liver, mitochondrial)
GLUD1 glutamate dehydrogenase 1
GLUD2 glutamate dehydrogenase 2
GLUL glutamate-ammonia ligase
GOT1 glutamic-oxaloacetic transaminase 1, soluble
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
HAAO 3-hydroxyanthranilate 3,4-dioxygenase
HACD1 3-hydroxyacyl-CoA dehydratase 1
HACD2 3-hydroxyacyl-CoA dehydratase 2
HACD3 3-hydroxyacyl-CoA dehydratase 3
HACD4 3-hydroxyacyl-CoA dehydratase 4
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8
HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
HTT huntingtin
IDO1 indoleamine 2,3-dioxygenase 1
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
KYNU kynureninase
LDHC lactate dehydrogenase C
LGSN lengsin, lens protein with glutamine synthetase domain
LIAS lipoic acid synthetase
LIPC lipase, hepatic
LIPT2 lipoyl(octanoyl) transferase 2 (putative)
LPL lipoprotein lipase
LTA4H leukotriene A4 hydrolase
LTC4S leukotriene C4 synthase
MCAT malonyl CoA:ACP acyltransferase (mitochondrial)
MECR mitochondrial trans-2-enoyl-CoA reductase
MGLL monoglyceride lipase
MGST2 microsomal glutathione S-transferase 2
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MLYCD malonyl-CoA decarboxylase
MRI1 methylthioribose-1-phosphate isomerase 1
MSMO1 methylsterol monooxygenase 1
MTAP methylthioadenosine phosphorylase
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MYO5A myosin VA (heavy chain 12, myoxin)
NAGS N-acetylglutamate synthase
NANP N-acetylneuraminic acid phosphatase
NCAN neurocan
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
NOXRED1 NADP-dependent oxidoreductase domain containing 1
OAT ornithine aminotransferase
OLAH oleoyl-ACP hydrolase
OTC ornithine carbamoyltransferase
OXSM 3-oxoacyl-ACP synthase, mitochondrial
PADI1 peptidyl arginine deiminase, type I
PADI2 peptidyl arginine deiminase, type II
PADI3 peptidyl arginine deiminase, type III
PADI4 peptidyl arginine deiminase, type IV
PADI6 peptidyl arginine deiminase, type VI
PAH phenylalanine hydroxylase
PARK7 parkinson protein 7
PECR peroxisomal trans-2-enoyl-CoA reductase
PER2 period circadian clock 2
PEX2 peroxisomal biogenesis factor 2
PHGDH phosphoglycerate dehydrogenase
PKLR pyruvate kinase, liver and RBC
PLA2G1B phospholipase A2, group IB (pancreas)
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
PLA2G4F phospholipase A2, group IVF
PLA2G5 phospholipase A2, group V
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PLP1 proteolipid protein 1
PNPLA8 patatin-like phospholipase domain containing 8
PRG3 proteoglycan 3
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit
PSAT1 phosphoserine aminotransferase 1
PSPH phosphoserine phosphatase
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTGES prostaglandin E synthase
PTGES2 prostaglandin E synthase 2
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTGIS prostaglandin I2 (prostacyclin) synthase
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PYCR1 pyrroline-5-carboxylate reductase 1
PYCR2 pyrroline-5-carboxylate reductase family, member 2
PYCRL pyrroline-5-carboxylate reductase-like
QKI QKI, KH domain containing, RNA binding
RDH10 retinol dehydrogenase 10 (all-trans)
RGN regucalcin
RNPEP arginyl aminopeptidase (aminopeptidase B)
RNPEPL1 arginyl aminopeptidase (aminopeptidase B)-like 1
SC5D sterol-C5-desaturase
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCD5 stearoyl-CoA desaturase 5
SCP2 sterol carrier protein 2
SDS serine dehydratase
SEPHS2 selenophosphate synthetase 2
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial)
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2
SLC27A5 solute carrier family 27 (fatty acid transporter), member 5
SLC35D1 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
SRR serine racemase
STAR steroidogenic acute regulatory protein
SYK spleen tyrosine kinase
TECR trans-2,3-enoyl-CoA reductase
THNSL1 threonine synthase-like 1 (S. cerevisiae)
THNSL2 threonine synthase-like 2 (S. cerevisiae)
TMLHE trimethyllysine hydroxylase, epsilon
UGDH UDP-glucose 6-dehydrogenase
UGP2 UDP-glucose pyrophosphorylase 2
UPB1 ureidopropionase, beta
UROS uroporphyrinogen III synthase
UST uronyl-2-sulfotransferase
VCAN versican
XBP1 X-box binding protein 1