organelle membrane contact site Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A zone of apposition between the membranes of two organelles, structured by bridging complexes. Membrane contact sites (MCSs) are specialized for communication, including the efficient traffic of small molecules such as Ca2+ ions and lipids, as well as enzyme-substrate interactions. (Gene Ontology, GO_0044232)
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Genes

48 proteins co-occuring with the organelle membrane contact site cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TEX2 testis expressed 2 1.31843
PDZD8 PDZ domain containing 8 1.17209
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae) 1.14136
NR3C2 nuclear receptor subfamily 3, group C, member 2 1.08526
OSBP oxysterol binding protein 1.04582
ESYT2 extended synaptotagmin-like protein 2 1.01982
FOXE1 forkhead box E1 0.936432
BPIFA1 BPI fold containing family A, member 1 0.89672
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.889783
TOB1 transducer of ERBB2, 1 0.841941
SAR1B secretion associated, Ras related GTPase 1B 0.79927
MAEA macrophage erythroblast attacher 0.772732
CNTN3 contactin 3 (plasmacytoma associated) 0.770451
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) 0.750904
ETV3 ets variant 3 0.71946
RHOT1 ras homolog family member T1 0.709251
PSG9 pregnancy specific beta-1-glycoprotein 9 0.692516
WDR20 WD repeat domain 20 0.689888
CGA glycoprotein hormones, alpha polypeptide 0.614165
OSTC oligosaccharyltransferase complex subunit (non-catalytic) 0.544823
NMU neuromedin U 0.538649
SLURP1 secreted LY6/PLAUR domain containing 1 0.535772
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 0.521023
BRCA1 breast cancer 1, early onset 0.519798
BRCA2 breast cancer 2, early onset 0.500258
FRY furry homolog (Drosophila) 0.490944
PER1 period circadian clock 1 0.481258
IL15 interleukin 15 0.47442
HMBS hydroxymethylbilane synthase 0.473215
SAMM50 SAMM50 sorting and assembly machinery component 0.449245
SH2D3A SH2 domain containing 3A 0.446862
BPI bactericidal/permeability-increasing protein 0.433012
CCL20 chemokine (C-C motif) ligand 20 0.415728
TLR5 toll-like receptor 5 0.405582
PPT1 palmitoyl-protein thioesterase 1 0.383509
PLTP phospholipid transfer protein 0.357847
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.356324
CXCL9 chemokine (C-X-C motif) ligand 9 0.330966
CS citrate synthase 0.319702
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 0.300682
COL18A1 collagen, type XVIII, alpha 1 0.290678
ATG7 autophagy related 7 0.264946
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.186397
EEF2 eukaryotic translation elongation factor 2 0.171673
CETP cholesteryl ester transfer protein, plasma 0.161068
PLEK pleckstrin 0.140229
ANK1 ankyrin 1, erythrocytic 0.139222
NES nestin 0.138108