organellar ribosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A ribosome contained within a subcellular membrane-bounded organelle. (Gene Ontology, GO_0000313)
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Genes

204 proteins co-occuring with the organellar ribosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MRPS7 mitochondrial ribosomal protein S7 1.79773
MRPL12 mitochondrial ribosomal protein L12 1.62118
MTIF3 mitochondrial translational initiation factor 3 1.60418
MRPS36 mitochondrial ribosomal protein S36 1.51186
MTRF1L mitochondrial translational release factor 1-like 1.44629
RPL21 ribosomal protein L21 1.38128
DAP3 death associated protein 3 1.36527
MALSU1 mitochondrial assembly of ribosomal large subunit 1 1.35485
MTIF2 mitochondrial translational initiation factor 2 1.29317
MRPL11 mitochondrial ribosomal protein L11 1.28569
RPS3 ribosomal protein S3 1.27877
PTCD3 pentatricopeptide repeat domain 3 1.2518
MRPS33 mitochondrial ribosomal protein S33 1.2314
MRPS22 mitochondrial ribosomal protein S22 1.2262
MRPS12 mitochondrial ribosomal protein S12 1.22153
RPL36 ribosomal protein L36 1.19263
RPS15 ribosomal protein S15 1.16594
NSUN4 NOP2/Sun domain family, member 4 1.10562
MTG1 mitochondrial ribosome-associated GTPase 1 1.10256
RNMTL1 RNA methyltransferase like 1 1.10002
RPL22 ribosomal protein L22 1.07816
RPS12 ribosomal protein S12 1.06144
MTRF1 mitochondrial translational release factor 1 1.0569
RPS2 ribosomal protein S2 1.02281
MRPL41 mitochondrial ribosomal protein L41 1.01982
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1 0.991225
C12ORF65 chromosome 12 open reading frame 65 0.990247
TFB1M transcription factor B1, mitochondrial 0.990247
ICT1 immature colon carcinoma transcript 1 0.981473
MRPL42 mitochondrial ribosomal protein L42 0.976619
MRPL55 mitochondrial ribosomal protein L55 0.976619
MRPS34 mitochondrial ribosomal protein S34 0.976619
MRPL10 mitochondrial ribosomal protein L10 0.976619
RPL27 ribosomal protein L27 0.963107
MRPL34 mitochondrial ribosomal protein L34 0.952573
MRPS9 mitochondrial ribosomal protein S9 0.951142
RPS16 ribosomal protein S16 0.943059
MRPS5 mitochondrial ribosomal protein S5 0.938322
RPS19 ribosomal protein S19 0.934544
MRPS14 mitochondrial ribosomal protein S14 0.924197
MPV17L2 MPV17 mitochondrial membrane protein-like 2 0.914842
MCTP1 multiple C2 domains, transmembrane 1 0.904138
MRPL48 mitochondrial ribosomal protein L48 0.900426
MRPL18 mitochondrial ribosomal protein L18 0.898572
MRPL53 mitochondrial ribosomal protein L53 0.89348
MRPS15 mitochondrial ribosomal protein S15 0.880555
NOA1 nitric oxide associated 1 0.879173
LETM1 leucine zipper-EF-hand containing transmembrane protein 1 0.869505
MRPL28 mitochondrial ribosomal protein L28 0.868586
TFB2M transcription factor B2, mitochondrial 0.862149
MRPS30 mitochondrial ribosomal protein S30 0.858933
RPS18P12 ribosomal protein S18 pseudogene 12 0.846073
RPS18 ribosomal protein S18 0.836433
RPL14 ribosomal protein L14 0.836433
RPL12 ribosomal protein L12 0.833679
COX18 COX18 cytochrome c oxidase assembly factor 0.831843
MTERF1 mitochondrial transcription termination factor 1 0.831843
MRPS24 mitochondrial ribosomal protein S24 0.830925
MRPL37 mitochondrial ribosomal protein L37 0.827254
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1 0.8089
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.800645
MRPS27 mitochondrial ribosomal protein S27 0.796062
FAM20C family with sequence similarity 20, member C 0.793771
RPL32 ribosomal protein L32 0.788733
HRSP12 heat-responsive protein 12 0.786444
OXA1L oxidase (cytochrome c) assembly 1-like 0.785986
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.781869
MYH14 myosin, heavy chain 14, non-muscle 0.779126
GFM1 G elongation factor, mitochondrial 1 0.766349
RPS8 ribosomal protein S8 0.765438
GOLPH3L golgi phosphoprotein 3-like 0.763617
POLRMT polymerase (RNA) mitochondrial (DNA directed) 0.748641
MRPL3 mitochondrial ribosomal protein L3 0.727494
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) 0.71768
MRPL40 mitochondrial ribosomal protein L40 0.683771
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae) 0.682027
CSNK1G3 casein kinase 1, gamma 3 0.678108
ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) 0.675934
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) 0.654311
RNMT RNA (guanine-7-) methyltransferase 0.647433
MCM3AP minichromosome maintenance complex component 3 associated protein 0.646574
RNASEH2A ribonuclease H2, subunit A 0.634586
RPL28 ribosomal protein L28 0.625206
PGP phosphoglycolate phosphatase 0.624355
AUH AU RNA binding protein/enoyl-CoA hydratase 0.623504
AURKAIP1 aurora kinase A interacting protein 1 0.588456
GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 0.587199
AFG3L2 AFG3-like AAA ATPase 2 0.587199
MIOX myo-inositol oxygenase 0.586361
CCDC40 coiled-coil domain containing 40 0.582176
ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 0.565092
RPL35 ribosomal protein L35 0.563017
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.562602
NT5C1A 5'-nucleotidase, cytosolic IA 0.561772
RPS21 ribosomal protein S21 0.561358
MTFMT mitochondrial methionyl-tRNA formyltransferase 0.558871
TWIST1 twist family bHLH transcription factor 1 0.555145
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.552664
GRSF1 G-rich RNA sequence binding factor 1 0.54194
CACTIN cactin, spliceosome C complex subunit 0.539883
ARHGAP21 Rho GTPase activating protein 21 0.535361
RPS27L ribosomal protein S27-like 0.521023
SLIRP SRA stem-loop interacting RNA binding protein 0.507163
GFM2 G elongation factor, mitochondrial 2 0.501476
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.493775
RPL3 ribosomal protein L3 0.489327
RPL7 ribosomal protein L7 0.486904
RPL31 ribosomal protein L31 0.485289
CR1 complement component (3b/4b) receptor 1 (Knops blood group) 0.484483
RPS29 ribosomal protein S29 0.473617
RPS14 ribosomal protein S14 0.470406
TUFM Tu translation elongation factor, mitochondrial 0.468001
GABPA GA binding protein transcription factor, alpha subunit 60kDa 0.45004
ELAC2 elaC ribonuclease Z 2 0.444085
GSTO1 glutathione S-transferase omega 1 0.442896
MGAM maltase-glucoamylase 0.425531
MRPL16 mitochondrial ribosomal protein L16 0.41886
RPS27 ribosomal protein S27 0.415728
RPL24 ribosomal protein L24 0.415337
PPP1R8 protein phosphatase 1, regulatory subunit 8 0.404026
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.401304
TST thiosulfate sulfurtransferase (rhodanese) 0.399363
MSX2 msh homeobox 2 0.395485
UMPS uridine monophosphate synthetase 0.393162
PTDSS1 phosphatidylserine synthase 1 0.386979
RPS11 ribosomal protein S11 0.382354
RPL5 ribosomal protein L5 0.378507
ESRRA estrogen-related receptor alpha 0.371982
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 0.369301
COX11 COX11 cytochrome c oxidase copper chaperone 0.362422
SRL sarcalumenin 0.360896
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.360515
ETF1 eukaryotic translation termination factor 1 0.35899
NTHL1 nth endonuclease III-like 1 (E. coli) 0.357086
RPL26 ribosomal protein L26 0.351762
RPL8 ribosomal protein L8 0.349105
GADD45G growth arrest and DNA-damage-inducible, gamma 0.318953
SNRPA small nuclear ribonucleoprotein polypeptide A 0.318953
MRPS2 mitochondrial ribosomal protein S2 0.315586
PARL presenilin associated, rhomboid-like 0.303283
ADNP activity-dependent neuroprotector homeobox 0.292527
MTO1 mitochondrial tRNA translation optimization 1 0.291417
COG8 component of oligomeric golgi complex 8 0.290678
RPL29 ribosomal protein L29 0.289199
MRPS10 mitochondrial ribosomal protein S10 0.288829
RPS13 ribosomal protein S13 0.28846
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.278877
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive) 0.271533
RPL10 ribosomal protein L10 0.270434
UNK unkempt family zinc finger 0.270434
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.263485
CS citrate synthase 0.261296
SIRT3 sirtuin 3 0.258016
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) 0.252564
LRPPRC leucine-rich pentatricopeptide repeat containing 0.248216
RPL10AP3 ribosomal protein L10a pseudogene 3 0.234174
RPL4 ribosomal protein L4 0.231315
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.224204
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 0.215412
YME1L1 YME1-like 1 ATPase 0.211933
MRPS11 mitochondrial ribosomal protein S11 0.209858
RAG1 recombination activating gene 1 0.208825
MFF mitochondrial fission factor 0.204378
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.204039
MT-ATP8 ATP synthase F0 subunit 8 0.200999
TFAM transcription factor A, mitochondrial 0.200328
DNAH8 dynein, axonemal, heavy chain 8 0.199993
MATK megakaryocyte-associated tyrosine kinase 0.196339
CLEC3B C-type lectin domain family 3, member B 0.1921
RPL10A ribosomal protein L10a 0.191777
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.190495
E2F1 E2F transcription factor 1 0.18093
CTF1 cardiotrophin 1 0.177724
MRRF mitochondrial ribosome recycling factor 0.174635
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.171673
MRPS16 mitochondrial ribosomal protein S16 0.16477
FH fumarate hydratase 0.159268
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.158315
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.143278
RIPK4 receptor-interacting serine-threonine kinase 4 0.142452
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.142235
RPL11 ribosomal protein L11 0.142102
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.140308
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.140111
OTC ornithine carbamoyltransferase 0.13944
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 0.139152
TYRO3 TYRO3 protein tyrosine kinase 0.1385
ASCC3 activating signal cointegrator 1 complex subunit 3 0.138206
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.126734
TXN thioredoxin 0.124267
EEF2 eukaryotic translation elongation factor 2 0.12387
MPG N-methylpurine-DNA glycosylase 0.123703
COX6CP4 cytochrome c oxidase subunit VIc pseudogene 4 0.123703
TAL1 T-cell acute lymphocytic leukemia 1 0.123263
CLCA4 chloride channel accessory 4 0.123263
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 0.123238
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.122625
CLCA2 chloride channel accessory 2 0.121956
MPV17 MpV17 mitochondrial inner membrane protein 0.12179
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 0.121566
PTGDR prostaglandin D2 receptor (DP) 0.121509
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.12072
WARS tryptophanyl-tRNA synthetase 0.120661
CLCA1 chloride channel accessory 1 0.120661