nuclei Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

232 genes co-occuring with the biological term nuclei in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ACHE acetylcholinesterase (Yt blood group)
AICDA activation-induced cytidine deaminase
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
AKAP8 A kinase (PRKA) anchor protein 8
ALDOA aldolase A, fructose-bisphosphate
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle)
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
AR androgen receptor
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ASCL1 achaete-scute family bHLH transcription factor 1
ATOH1 atonal homolog 1 (Drosophila)
ATOX1 antioxidant 1 copper chaperone
AURKB aurora kinase B
AVP arginine vasopressin
BCLAF1 BCL2-associated transcription factor 1
BDNF brain-derived neurotrophic factor
BIN1 bridging integrator 1
BIRC5 baculoviral IAP repeat containing 5
CALD1 caldesmon 1
CAPG capping protein (actin filament), gelsolin-like
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CCDC78 coiled-coil domain containing 78
CCNB1 cyclin B1
CCND1 cyclin D1
CDC45 cell division cycle 45
CDK18 cyclin-dependent kinase 18
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDX2 caudal type homeobox 2
CPT1A carnitine palmitoyltransferase 1A (liver)
CREBZF CREB/ATF bZIP transcription factor
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
DCX doublecortin
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase)
DDN dendrin
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DICER1 dicer 1, ribonuclease type III
DMD dystrophin
DMPK dystrophia myotonica-protein kinase
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14
DUX1 double homeobox 1
DUX4L1 double homeobox 4 like 1
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
EEF1A1 eukaryotic translation elongation factor 1 alpha 1
EIF1AX eukaryotic translation initiation factor 1A, X-linked
ELK1 ELK1, member of ETS oncogene family
EMD emerin
ENPEP glutamyl aminopeptidase (aminopeptidase A)
EP300 E1A binding protein p300
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
ESRG embryonic stem cell related (non-protein coding)
ESRRB estrogen-related receptor beta
ETV4 ets variant 4
FBL fibrillarin
FBLIM1 filamin binding LIM protein 1
FEV FEV (ETS oncogene family)
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FGFR1 fibroblast growth factor receptor 1
FLT3 fms-related tyrosine kinase 3
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GAP43 growth associated protein 43
GCG glucagon
GCK glucokinase (hexokinase 4)
GFRA1 GDNF family receptor alpha 1
GFRA2 GDNF family receptor alpha 2
GHRL ghrelin/obestatin prepropeptide
GLI2 GLI family zinc finger 2
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
GPR85 G protein-coupled receptor 85
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1
H2AFX H2A histone family, member X
HMGB1 high mobility group box 1
HMGN2 high mobility group nucleosomal binding domain 2
HOXA7 homeobox A7
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1
HSPA4 heat shock 70kDa protein 4
HSPB1 heat shock 27kDa protein 1
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HTT huntingtin
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IL1A interleukin 1, alpha
IL33 interleukin 33
IL6 interleukin 6
JUN jun proto-oncogene
KLF4 Kruppel-like factor 4 (gut)
KLK3 kallikrein-related peptidase 3
KRT7 keratin 7, type II
LGALS2 lectin, galactoside-binding, soluble, 2
LGALS3 lectin, galactoside-binding, soluble, 3
LILRB4 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4
LMNA lamin A/C
LMNB1 lamin B1
MACC1 metastasis associated in colon cancer 1
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast)
MAOB monoamine oxidase B
MAPK8 mitogen-activated protein kinase 8
MAPT microtubule-associated protein tau
MCM3AP minichromosome maintenance complex component 3 associated protein
MECOM MDS1 and EVI1 complex locus
MECP2 methyl CpG binding protein 2
MKI67 marker of proliferation Ki-67
MKI67P1 marker of proliferation Ki-67 pseudogene 1
MLXIP MLX interacting protein
MMP1 matrix metallopeptidase 1
MMP9 matrix metallopeptidase 9
MSX1 msh homeobox 1
MYC v-myc avian myelocytomatosis viral oncogene homolog
NCL nucleolin
NCOA6 nuclear receptor coactivator 6
NDN necdin, melanoma antigen (MAGE) family member
NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding)
NELFA negative elongation factor complex member A
NELFB negative elongation factor complex member B
NELFCD negative elongation factor complex member C/D
NELFE negative elongation factor complex member E
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NFE2L2 nuclear factor, erythroid 2-like 2
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NKX2-1 NK2 homeobox 1
NME1 NME/NM23 nucleoside diphosphate kinase 1
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain)
NOS1 nitric oxide synthase 1 (neuronal)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR4A1 nuclear receptor subfamily 4, group A, member 1
NRD1 nardilysin (N-arginine dibasic convertase)
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NUMA1 nuclear mitotic apparatus protein 1
NUP98 nucleoporin 98kDa
OGG1 8-oxoguanine DNA glycosylase
OPRM1 opioid receptor, mu 1
ORC1 origin recognition complex, subunit 1
OTX2 orthodenticle homeobox 2
OXT oxytocin/neurophysin I prepropeptide
PARP1 poly (ADP-ribose) polymerase 1
PASK PAS domain containing serine/threonine kinase
PAX6 paired box 6
PCNA proliferating cell nuclear antigen
PDX1 pancreatic and duodenal homeobox 1
PER1 period circadian clock 1
PHOX2B paired-like homeobox 2b
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
PITX1 paired-like homeodomain 1
PLCB2 phospholipase C, beta 2
PLK1 polo-like kinase 1
PML promyelocytic leukemia
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR1C polymerase (RNA) I polypeptide C, 30kDa
POLR1D polymerase (RNA) I polypeptide D, 16kDa
POT1 protection of telomeres 1
POU5F1 POU class 5 homeobox 1
PPIA peptidylprolyl isomerase A (cyclophilin A)
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PROX1 prospero homeobox 1
PSIP1 PC4 and SFRS1 interacting protein 1
PTH1R parathyroid hormone 1 receptor
PTHLH parathyroid hormone-like hormone
RAE1 ribonucleic acid export 1
RARA retinoic acid receptor, alpha
RARB retinoic acid receptor, beta
RARG retinoic acid receptor, gamma
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RNH1 ribonuclease/angiogenin inhibitor 1
RPLP0 ribosomal protein, large, P0
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2
RUNX3 runt-related transcription factor 3
RUVBL2 RuvB-like AAA ATPase 2
RXRA retinoid X receptor, alpha
RYR1 ryanodine receptor 1 (skeletal)
S100A8 S100 calcium binding protein A8
S100A9 S100 calcium binding protein A9
SCNN1D sodium channel, non voltage gated 1 delta subunit
SFN stratifin
SIAH2 siah E3 ubiquitin protein ligase 2
SIRT1 sirtuin 1
SIRT3 sirtuin 3
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
SMAD3 SMAD family member 3
SMN1 survival of motor neuron 1, telomeric
SMPX small muscle protein, X-linked
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNTA1 syntrophin, alpha 1
SOD1 superoxide dismutase 1, soluble
SREBF1 sterol regulatory element binding transcription factor 1
SREBF2 sterol regulatory element binding transcription factor 2
SRSF1 serine/arginine-rich splicing factor 1
SRSF2 serine/arginine-rich splicing factor 2
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
SULT2B1 sulfotransferase family, cytosolic, 2B, member 1
SUMO3 small ubiquitin-like modifier 3
TAC1 tachykinin, precursor 1
TACR1 tachykinin receptor 1
TET1 tet methylcytosine dioxygenase 1
TFAM transcription factor A, mitochondrial
TH tyrosine hydroxylase
TIAM1 T-cell lymphoma invasion and metastasis 1
TLR9 toll-like receptor 9
TMSB15A thymosin beta 15a
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TP63 tumor protein p63
TPH2 tryptophan hydroxylase 2
TROVE2 TROVE domain family, member 2
TUBB4B tubulin, beta 4B class IVb
TUBG1 tubulin, gamma 1
TXN thioredoxin
TXNIP thioredoxin interacting protein
U2AF1 U2 small nuclear RNA auxiliary factor 1
U2AF2 U2 small nuclear RNA auxiliary factor 2
UBC ubiquitin C
UBR5 ubiquitin protein ligase E3 component n-recognin 5
USF1 upstream transcription factor 1
VCP valosin containing protein
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
XPO5 exportin 5
ZBP1 Z-DNA binding protein 1
ZNF346 zinc finger protein 346