nuclear-transcribed mrna catabolic process Gene Set

Dataset GO Biological Process Annotations
Category structural or functional annotations
Type biological process
Description The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells. (Gene Ontology, GO_0000956)
External Link http://amigo.geneontology.org/amigo/term/GO:0000956
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Genes

179 genes participating in the nuclear-transcribed mrna catabolic process biological process from the curated GO Biological Process Annotations dataset.

Symbol Name
AGO1 argonaute RISC catalytic component 1
ATM ATM serine/threonine kinase
CASC3 cancer susceptibility candidate 3
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae)
CNOT1 CCR4-NOT transcription complex, subunit 1
CNOT10 CCR4-NOT transcription complex, subunit 10
CNOT11 CCR4-NOT transcription complex, subunit 11
CNOT2 CCR4-NOT transcription complex, subunit 2
CNOT3 CCR4-NOT transcription complex, subunit 3
CNOT4 CCR4-NOT transcription complex, subunit 4
CNOT6 CCR4-NOT transcription complex, subunit 6
CNOT6L CCR4-NOT transcription complex, subunit 6-like
CNOT7 CCR4-NOT transcription complex, subunit 7
CNOT8 CCR4-NOT transcription complex, subunit 8
CSDE1 cold shock domain containing E1, RNA-binding
CTIF CBP80/20-dependent translation initiation factor
DCP1A decapping mRNA 1A
DCP1B decapping mRNA 1B
DCP2 decapping mRNA 2
DCPS decapping enzyme, scavenger
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DIS3L2 DIS3 like 3'-5' exoribonuclease 2
DXO decapping exoribonuclease
EDC3 enhancer of mRNA decapping 3
EDC4 enhancer of mRNA decapping 4
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF4A1 eukaryotic translation initiation factor 4A1
EIF4A2 eukaryotic translation initiation factor 4A2
EIF4A3 eukaryotic translation initiation factor 4A3
EIF4B eukaryotic translation initiation factor 4B
EIF4E eukaryotic translation initiation factor 4E
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1
ERI1 exoribonuclease 1
ETF1 eukaryotic translation termination factor 1
EXOSC1 exosome component 1
EXOSC10 exosome component 10
EXOSC2 exosome component 2
EXOSC3 exosome component 3
EXOSC4 exosome component 4
EXOSC5 exosome component 5
EXOSC6 exosome component 6
EXOSC7 exosome component 7
EXOSC8 exosome component 8
EXOSC9 exosome component 9
GSPT1 G1 to S phase transition 1
GSPT2 G1 to S phase transition 2
LSM1 LSM1, U6 small nuclear RNA associated
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAGOH mago-nashi homolog, proliferation-associated (Drosophila)
MLH1 mutL homolog 1
MTPAP mitochondrial poly(A) polymerase
NBAS neuroblastoma amplified sequence
NCBP1 nuclear cap binding protein subunit 1, 80kDa
NCBP2 nuclear cap binding protein subunit 2, 20kDa
PABPC1 poly(A) binding protein, cytoplasmic 1
PAIP1 poly(A) binding protein interacting protein 1
PAN2 PAN2 poly(A) specific ribonuclease subunit
PAN3 PAN3 poly(A) specific ribonuclease subunit
PAPD4 PAP associated domain containing 4
PAPD5 PAP associated domain containing 5
PARN poly(A)-specific ribonuclease
PATL1 protein associated with topoisomerase II homolog 1 (yeast)
PELO pelota homolog (Drosophila)
PNRC2 proline-rich nuclear receptor coactivator 2
POLR2D polymerase (RNA) II (DNA directed) polypeptide D
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
RBM8A RNA binding motif protein 8A
RC3H1 ring finger and CCCH-type domains 1
RNPS1 RNA binding protein S1, serine-rich domain
RPL10 ribosomal protein L10
RPL10A ribosomal protein L10a
RPL11 ribosomal protein L11
RPL12 ribosomal protein L12
RPL13 ribosomal protein L13
RPL13A ribosomal protein L13a
RPL14 ribosomal protein L14
RPL15 ribosomal protein L15
RPL18 ribosomal protein L18
RPL18A ribosomal protein L18a
RPL19 ribosomal protein L19
RPL21 ribosomal protein L21
RPL22 ribosomal protein L22
RPL23 ribosomal protein L23
RPL23A ribosomal protein L23a
RPL24 ribosomal protein L24
RPL26 ribosomal protein L26
RPL26L1 ribosomal protein L26-like 1
RPL27 ribosomal protein L27
RPL27A ribosomal protein L27a
RPL28 ribosomal protein L28
RPL29 ribosomal protein L29
RPL3 ribosomal protein L3
RPL30 ribosomal protein L30
RPL31 ribosomal protein L31
RPL32 ribosomal protein L32
RPL34 ribosomal protein L34
RPL35 ribosomal protein L35
RPL35A ribosomal protein L35a
RPL36 ribosomal protein L36
RPL36A ribosomal protein L36a
RPL37 ribosomal protein L37
RPL37A ribosomal protein L37a
RPL38 ribosomal protein L38
RPL39 ribosomal protein L39
RPL3L ribosomal protein L3-like
RPL4 ribosomal protein L4
RPL41 ribosomal protein L41
RPL5 ribosomal protein L5
RPL6 ribosomal protein L6
RPL7 ribosomal protein L7
RPL7A ribosomal protein L7a
RPL8 ribosomal protein L8
RPL9 ribosomal protein L9
RPLP0 ribosomal protein, large, P0
RPLP1 ribosomal protein, large, P1
RPLP2 ribosomal protein, large, P2
RPS10 ribosomal protein S10
RPS11 ribosomal protein S11
RPS12 ribosomal protein S12
RPS13 ribosomal protein S13
RPS14 ribosomal protein S14
RPS15 ribosomal protein S15
RPS15A ribosomal protein S15a
RPS16 ribosomal protein S16
RPS17 ribosomal protein S17
RPS18 ribosomal protein S18
RPS19 ribosomal protein S19
RPS2 ribosomal protein S2
RPS20 ribosomal protein S20
RPS21 ribosomal protein S21
RPS23 ribosomal protein S23
RPS24 ribosomal protein S24
RPS25 ribosomal protein S25
RPS27 ribosomal protein S27
RPS27A ribosomal protein S27a
RPS28 ribosomal protein S28
RPS29 ribosomal protein S29
RPS3 ribosomal protein S3
RPS3A ribosomal protein S3A
RPS4X ribosomal protein S4, X-linked
RPS4Y1 ribosomal protein S4, Y-linked 1
RPS5 ribosomal protein S5
RPS6 ribosomal protein S6
RPS7 ribosomal protein S7
RPS8 ribosomal protein S8
RPS9 ribosomal protein S9
RPSA ribosomal protein SA
RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe)
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SMG5 SMG5 nonsense mediated mRNA decay factor
SMG6 SMG6 nonsense mediated mRNA decay factor
SMG7 SMG7 nonsense mediated mRNA decay factor
SMG8 SMG8 nonsense mediated mRNA decay factor
SMG9 SMG9 nonsense mediated mRNA decay factor
THRAP3 thyroid hormone receptor associated protein 3
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
TUT1 terminal uridylyl transferase 1, U6 snRNA-specific
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast)
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
WIBG within bgcn homolog (Drosophila)
XRN1 5'-3' exoribonuclease 1
ZCCHC11 zinc finger, CCHC domain containing 11
ZCCHC6 zinc finger, CCHC domain containing 6
ZFP36 ZFP36 ring finger protein
ZFP36L1 ZFP36 ring finger protein-like 1
ZFP36L2 ZFP36 ring finger protein-like 2