nuclear matrix Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The dense fibrillar network lying on the inner side of the nuclear membrane. (Gene Ontology, GO_0016363)
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Genes

77 proteins localized to the nuclear matrix cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HAT1 histone acetyltransferase 1 0.663342
ATXN1 ataxin 1 0.663342
ATXN7 ataxin 7 0.663342
MATR3 matrin 3 0.663342
PHB2 prohibitin 2 0.663342
NCOR2 nuclear receptor corepressor 2 0.663342
OGG1 8-oxoguanine DNA glycosylase 0.663342
PML promyelocytic leukemia 0.663342
ATN1 atrophin 1 0.663342
SCAF8 SR-related CTD-associated factor 8 0.663342
GFI1 growth factor independent 1 transcription repressor 0.663342
RUVBL2 RuvB-like AAA ATPase 2 0.663342
RUVBL1 RuvB-like AAA ATPase 1 0.663342
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.663342
PHF5A PHD finger protein 5A 0.663342
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.663342
SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 0.663342
SATB1 SATB homeobox 1 0.663342
BLM Bloom syndrome, RecQ helicase-like 0.663342
SRPK1 SRSF protein kinase 1 0.663342
TEP1 telomerase-associated protein 1 0.663342
ALOX5 arachidonate 5-lipoxygenase 0.663342
MYB v-myb avian myeloblastosis viral oncogene homolog 0.663342
SMC3 structural maintenance of chromosomes 3 0.663342
ZNF350 zinc finger protein 350 0.663342
SFPQ splicing factor proline/glutamine-rich 0.663342
THOC1 THO complex 1 0.663342
KIN Kin17 DNA and RNA binding protein 0.663342
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.663342
AKAP8 A kinase (PRKA) anchor protein 8 0.663342
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 0.663342
CENPW centromere protein W 0.663342
CENPF centromere protein F, 350/400kDa 0.663342
PHACTR3 phosphatase and actin regulator 3 0.663342
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.663342
GFI1B growth factor independent 1B transcription repressor 0.663342
SRRM1 serine/arginine repetitive matrix 1 0.663342
CLIC4 chloride intracellular channel 4 0.663342
CHMP1A charged multivesicular body protein 1A 0.663342
ZNF703 zinc finger protein 703 0.663342
MEN1 multiple endocrine neoplasia I 0.663342
SPTBN4 spectrin, beta, non-erythrocytic 4 0.663342
DCAF7 DDB1 and CUL4 associated factor 7 0.663342
ERCC8 excision repair cross-complementation group 8 0.663342
SNW1 SNW domain containing 1 0.663342
TGFB1I1 transforming growth factor beta 1 induced transcript 1 0.663342
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 0.663342
KIF4A kinesin family member 4A 0.663342
TP53 tumor protein p53 0.663342
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.663342
YEATS4 YEATS domain containing 4 0.663342
NUMA1 nuclear mitotic apparatus protein 1 0.663342
AKAP8L A kinase (PRKA) anchor protein 8-like 0.663342
MAEA macrophage erythroblast attacher 0.663342
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.237908
TENM1 teneurin transmembrane protein 1 0.237908
FIGN fidgetin 0.237908
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 0.237908
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.237908
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.237908
GHRHR growth hormone releasing hormone receptor 0.237908
NONO non-POU domain containing, octamer-binding 0.237908
MBD1 methyl-CpG binding domain protein 1 0.237908
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 0.237908
UHRF1 ubiquitin-like with PHD and ring finger domains 1 0.098109
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.098109
GMCL1 germ cell-less, spermatogenesis associated 1 0.03318
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 0.03318
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D 0.03318
ZNF326 zinc finger protein 326 0.03318
PIAS4 protein inhibitor of activated STAT, 4 0.03318
AHCTF1 AT hook containing transcription factor 1 0.03318
JAK2 Janus kinase 2 0.03318
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.03318
PRKCZ protein kinase C, zeta 0.03318
CXXC1 CXXC finger protein 1 0.03318
PRKCD protein kinase C, delta 0.03318