notochordal cancer Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description An embryonal cancer and bone cancer and mesenchymal cell neoplasm that is located_in the notochord. (Human Disease Ontology, DOID_3303)
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Genes

132 genes co-occuring with the disease notochordal cancer in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
TMEM144 transmembrane protein 144 1.3952
PDGFRB platelet-derived growth factor receptor, beta polypeptide 1.1312
MET MET proto-oncogene, receptor tyrosine kinase 1.05429
KRT8 keratin 8, type II 1.05219
ALG11 ALG11, alpha-1,2-mannosyltransferase 0.949936
KRT7 keratin 7, type II 0.864684
MTAP methylthioadenosine phosphorylase 0.862228
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.843392
ENO2 enolase 2 (gamma, neuronal) 0.813462
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.801564
EGFR epidermal growth factor receptor 0.788033
S100P S100 calcium binding protein P 0.770844
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.737054
VIM vimentin 0.726929
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.676706
CD24 CD24 molecule 0.672324
GFAP glial fibrillary acidic protein 0.665563
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.665563
UGDH UDP-glucose 6-dehydrogenase 0.635921
RAB38 RAB38, member RAS oncogene family 0.635135
SYP synaptophysin 0.631205
PTEN phosphatase and tensin homolog 0.630027
TNFRSF9 tumor necrosis factor receptor superfamily, member 9 0.621008
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.614356
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.592116
LGALS3 lectin, galactoside-binding, soluble, 3 0.590558
KRT20 keratin 20, type I 0.58939
VAMP8 vesicle-associated membrane protein 8 0.567997
ONECUT3 one cut homeobox 3 0.558285
DLEC1 deleted in lung and esophageal cancer 1 0.552851
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.545868
PIR pirin (iron-binding nuclear protein) 0.530381
PDGFB platelet-derived growth factor beta polypeptide 0.52536
MFGE8 milk fat globule-EGF factor 8 protein 0.509576
KRT84 keratin 84, type II 0.501527
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.496939
IVD isovaleryl-CoA dehydrogenase 0.489311
EWSR1 EWS RNA-binding protein 1 0.485505
MMP19 matrix metallopeptidase 19 0.484744
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.482084
TFE3 transcription factor binding to IGHM enhancer 3 0.476393
TSC2 tuberous sclerosis 2 0.470332
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.467684
TACSTD2 tumor-associated calcium signal transducer 2 0.464283
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.463905
EIF4E eukaryotic translation initiation factor 4E 0.443923
TES testin LIM domain protein 0.442795
B3GAT1 beta-1,3-glucuronyltransferase 1 0.44129
PLAU plasminogen activator, urokinase 0.43941
KRT19 keratin 19, type I 0.433772
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1 0.430393
CFAP74 cilia and flagella associated protein 74 0.42214
CYS1 cystin 1 0.393746
PDPN podoplanin 0.388166
MMP1 matrix metallopeptidase 1 0.382223
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 0.381481
TP53 tumor protein p53 0.377773
FRS2 fibroblast growth factor receptor substrate 2 0.373328
KDR kinase insert domain receptor 0.36704
DVL1 dishevelled segment polarity protein 1 0.365932
TNS1 tensin 1 0.358551
KRT83 keratin 83, type II 0.355604
BAD BCL2-associated agonist of cell death 0.349349
TNFRSF8 tumor necrosis factor receptor superfamily, member 8 0.34384
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 0.32993
PGR progesterone receptor 0.324823
RECK reversion-inducing-cysteine-rich protein with kazal motifs 0.311739
MMP2 matrix metallopeptidase 2 0.300173
SOX2 SRY (sex determining region Y)-box 2 0.284013
CD68 CD68 molecule 0.283297
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.282225
HIC1 hypermethylated in cancer 1 0.281153
NT5E 5'-nucleotidase, ecto (CD73) 0.280796
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 0.278297
MIR31 microRNA 31 0.275445
MIR222 microRNA 222 0.274732
CD34 CD34 molecule 0.274021
PYGB phosphorylase, glycogen; brain 0.270464
SETD1A SET domain containing 1A 0.269753
PYGL phosphorylase, glycogen, liver 0.267267
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.266913
MMP9 matrix metallopeptidase 9 0.264785
CHGA chromogranin A 0.263368
MTA1 metastasis associated 1 0.263014
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.261245
ACAN aggrecan 0.257711
CNOT2 CCR4-NOT transcription complex, subunit 2 0.256652
HDAC4 histone deacetylase 4 0.251718
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 0.245046
PYGM phosphorylase, glycogen, muscle 0.242945
MLANA melan-A 0.234225
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.233878
SALL4 spalt-like transcription factor 4 0.228679
KRT1 keratin 1, type II 0.223853
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.220081
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.218034
KRT5 keratin 5, type II 0.215992
HDAC6 histone deacetylase 6 0.214297
FGFR4 fibroblast growth factor receptor 4 0.210253
ANO1 anoctamin 1, calcium activated chloride channel 0.205916
FSCN3 fascin actin-bundling protein 3, testicular 0.204923
HRAS Harvey rat sarcoma viral oncogene homolog 0.200656
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 0.199681
NONO non-POU domain containing, octamer-binding 0.193915
RDX radixin 0.193285
CLEC3A C-type lectin domain family 3, member A 0.192657
CLEC2B C-type lectin domain family 2, member B 0.188632
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.188022
FOXO4 forkhead box O4 0.184128
HAVCR1 hepatitis A virus cellular receptor 1 0.183248
FSCN2 fascin actin-bundling protein 2, retinal 0.182957
PAX7 paired box 7 0.180084
AMD1 adenosylmethionine decarboxylase 1 0.179239
SPHK1 sphingosine kinase 1 0.177301
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 0.174093
NOTCH1 notch 1 0.173057
CTSB cathepsin B 0.172038
CLEC10A C-type lectin domain family 10, member A 0.171286
CCL3 chemokine (C-C motif) ligand 3 0.168148
AQP1 aquaporin 1 (Colton blood group) 0.168148
ESR1 estrogen receptor 1 0.166095
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.158916
MAP2 microtubule-associated protein 2 0.144874
EPCAM epithelial cell adhesion molecule 0.141749
MKI67 marker of proliferation Ki-67 0.140568
FSCN1 fascin actin-bundling protein 1 0.139596
SOX9 SRY (sex determining region Y)-box 9 0.138494
FHIT fragile histidine triad 0.1367
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.134965
PCNA proliferating cell nuclear antigen 0.129859
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.122412
TIMP1 TIMP metallopeptidase inhibitor 1 0.118484