non-hodgkin lymphoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

301 proteins co-occuring with the tissue non-hodgkin lymphoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
CCND1 cyclin D1 2.05835
ZNF280A zinc finger protein 280A 1.90862
NUGGC nuclear GTPase, germinal center associated 1.34179
SOX11 SRY (sex determining region Y)-box 11 1.33772
JADE3 jade family PHD finger 3 1.33003
PIK3IP1 phosphoinositide-3-kinase interacting protein 1 1.18334
SOX12 SRY (sex determining region Y)-box 12 1.18201
SREK1 splicing regulatory glutamine/lysine-rich protein 1 1.18068
MTOR mechanistic target of rapamycin (serine/threonine kinase) 1.1758
RGS13 regulator of G-protein signaling 13 1.17269
MOB3B MOB kinase activator 3B 1.15362
TBC1D9 TBC1 domain family, member 9 (with GRAM domain) 1.14476
BCL2L1 BCL2-like 1 1.13944
AKT1 v-akt murine thymoma viral oncogene homolog 1 1.13457
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 1.1204
CD5 CD5 molecule 1.06868
SETMAR SET domain and mariner transposase fusion gene 1.06559
TP53 tumor protein p53 1.06118
HDGFRP3 hepatoma-derived growth factor, related protein 3 1.02425
BTK Bruton agammaglobulinemia tyrosine kinase 1.02294
CADM1 cell adhesion molecule 1 1.01156
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 1.00676
HOXC12 homeobox C12 0.981518
CDK4 cyclin-dependent kinase 4 0.972417
ATM ATM serine/threonine kinase 0.959017
GPR61 G protein-coupled receptor 61 0.927192
CD19 CD19 molecule 0.918633
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.900296
BAX BCL2-associated X protein 0.864734
KLRK1 killer cell lectin-like receptor subfamily K, member 1 0.834061
SFMBT2 Scm-like with four mbt domains 2 0.799791
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.780648
XPO1 exportin 1 0.780648
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.774834
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 0.759914
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.758673
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.74834
MIR96 microRNA 96 0.747102
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.738442
ROR1 receptor tyrosine kinase-like orphan receptor 1 0.734323
BCL2L11 BCL2-like 11 (apoptosis facilitator) 0.721166
PARP1 poly (ADP-ribose) polymerase 1 0.70968
DLEU2L deleted in lymphocytic leukemia 2-like 0.708041
PRMT5 protein arginine methyltransferase 5 0.697808
CD40 CD40 molecule, TNF receptor superfamily member 5 0.683919
CDK9 cyclin-dependent kinase 9 0.681471
BIK BCL2-interacting killer (apoptosis-inducing) 0.674543
CKS1B CDC28 protein kinase regulatory subunit 1B 0.671692
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.667622
CD40LG CD40 ligand 0.661116
HRK harakiri, BCL2 interacting protein 0.659897
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.656242
HAVCR2 hepatitis A virus cellular receptor 2 0.642454
IGKV1D-42 immunoglobulin kappa variable 1D-42 (non-functional) 0.618603
ERAP2 endoplasmic reticulum aminopeptidase 2 0.603295
EIF4E eukaryotic translation initiation factor 4E 0.595656
SUZ12 SUZ12 polycomb repressive complex 2 subunit 0.588431
GLIS2 GLIS family zinc finger 2 0.586427
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3 0.580417
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.577615
CDK6 cyclin-dependent kinase 6 0.573616
SEMG1 semenogelin I 0.569622
CDKN2A cyclin-dependent kinase inhibitor 2A 0.567626
CCND2 cyclin D2 0.56603
CERS6 ceramide synthase 6 0.56603
ANXA5 annexin A5 0.562042
LOXL3 lysyl oxidase-like 3 0.555274
SOX4 SRY (sex determining region Y)-box 4 0.55249
IRF4 interferon regulatory factor 4 0.551695
CD37 CD37 molecule 0.550106
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 0.549312
HDAC9 histone deacetylase 9 0.546929
NGDN neuroguidin, EIF4E binding protein 0.540981
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.539793
SMC1A structural maintenance of chromosomes 1A 0.535438
HOXD8 homeobox D8 0.533856
LOXL4 lysyl oxidase-like 4 0.5228
GDF1 growth differentiation factor 1 0.522405
CDK7 cyclin-dependent kinase 7 0.518859
SYK spleen tyrosine kinase 0.51453
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) 0.506279
MLF1 myeloid leukemia factor 1 0.503141
CCND3 cyclin D3 0.501574
RCC1 regulator of chromosome condensation 1 0.497266
LYN LYN proto-oncogene, Src family tyrosine kinase 0.497266
GPX7 glutathione peroxidase 7 0.496483
SKP1 S-phase kinase-associated protein 1 0.495309
SGPL1 sphingosine-1-phosphate lyase 1 0.492572
NCF2 neutrophil cytosolic factor 2 0.485935
NCR1 natural cytotoxicity triggering receptor 1 0.485545
MICA MHC class I polypeptide-related sequence A 0.483206
FAF1 Fas (TNFRSF6) associated factor 1 0.468824
ZNF804A zinc finger protein 804A 0.456828
NCOR2 nuclear receptor corepressor 2 0.448731
ATG3 autophagy related 3 0.446807
BIRC3 baculoviral IAP repeat containing 3 0.446807
MAP6 microtubule-associated protein 6 0.439123
NEBL nebulette 0.436438
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.43146
BCL2 B-cell CLL/lymphoma 2 0.431077
AICDA activation-induced cytidine deaminase 0.430312
HIST1H1D histone cluster 1, H1d 0.428018
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 0.423436
RXRG retinoid X receptor, gamma 0.42191
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.42191
PRF1 perforin 1 (pore forming protein) 0.420385
GLRA1 glycine receptor, alpha 1 0.420004
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.416576
RALB v-ral simian leukemia viral oncogene homolog B 0.416576
AK5 adenylate kinase 5 0.406315
IL21 interleukin 21 0.406315
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.405176
MIR17 microRNA 17 0.402523
PTEN phosphatase and tensin homolog 0.399114
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 0.398357
GDF7 growth differentiation factor 7 0.398357
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.393819
NCAM1 neural cell adhesion molecule 1 0.391553
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.386273
CYFIP2 cytoplasmic FMR1 interacting protein 2 0.378748
NCF1C neutrophil cytosolic factor 1C pseudogene 0.377621
WHSC1 Wolf-Hirschhorn syndrome candidate 1 0.373493
LHX9 LIM homeobox 9 0.369747
ARHGAP32 Rho GTPase activating protein 32 0.368998
ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 0.368624
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.36526
RB1 retinoblastoma 1 0.364513
HLA-C major histocompatibility complex, class I, C 0.360409
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.358919
TEAD2 TEA domain family member 2 0.356314
HOXD10 homeobox D10 0.35557
CD70 CD70 molecule 0.354084
FASLG Fas ligand (TNF superfamily, member 6) 0.354084
CD38 CD38 molecule 0.351856
DUSP5 dual specificity phosphatase 5 0.351856
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 0.351114
NCF1 neutrophil cytosolic factor 1 0.350001
ALOX5 arachidonate 5-lipoxygenase 0.350001
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 0.348889
MDM4 MDM4, p53 regulator 0.347038
MIR183 microRNA 183 0.34371
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 0.342602
TPX2 TPX2, microtubule-associated 0.341126
IL22RA1 interleukin 22 receptor, alpha 1 0.333763
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.331927
HLA-G major histocompatibility complex, class I, G 0.327896
NT5C2 5'-nucleotidase, cytosolic II 0.32753
HDAC8 histone deacetylase 8 0.32753
CDC37 cell division cycle 37 0.325701
GZMK granzyme K (granzyme 3; tryptase II) 0.324605
IL2 interleukin 2 0.323509
BRCA2 breast cancer 2, early onset 0.319863
ING1 inhibitor of growth family, member 1 0.319134
CENPF centromere protein F, 350/400kDa 0.314772
KMT2B lysine (K)-specific methyltransferase 2B 0.31332
CCNH cyclin H 0.311507
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.311145
MAP4 microtubule-associated protein 4 0.306444
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.301398
HOXA11 homeobox A11 0.298165
CXCR5 chemokine (C-X-C motif) receptor 5 0.296372
RBL2 retinoblastoma-like 2 0.295655
ADSS adenylosuccinate synthase 0.294939
HRAS Harvey rat sarcoma viral oncogene homolog 0.291365
FZD2 frizzled class receptor 2 0.285316
STAT4 signal transducer and activator of transcription 4 0.284253
DVL2 dishevelled segment polarity protein 2 0.282837
NCF4 neutrophil cytosolic factor 4, 40kDa 0.281776
ALDOC aldolase C, fructose-bisphosphate 0.28107
YY1 YY1 transcription factor 0.280012
HIC1 hypermethylated in cancer 1 0.276495
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 0.271952
BMI1 BMI1 proto-oncogene, polycomb ring finger 0.271604
UHRF1 ubiquitin-like with PHD and ring finger domains 1 0.271256
CD27 CD27 molecule 0.267791
CNR1 cannabinoid receptor 1 (brain) 0.267102
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.266757
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.265038
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.259929
RING1 ring finger protein 1 0.256234
BIRC5 baculoviral IAP repeat containing 5 0.255234
WNT3 wingless-type MMTV integration site family, member 3 0.254902
PIM2 Pim-2 proto-oncogene, serine/threonine kinase 0.25457
TNF tumor necrosis factor 0.252261
PIGF phosphatidylinositol glycan anchor biosynthesis, class F 0.251279
HSPA4 heat shock 70kDa protein 4 0.250301
MTAP methylthioadenosine phosphorylase 0.245491
LONP1 lon peptidase 1, mitochondrial 0.242672
CD8B CD8b molecule 0.241746
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.23961
CXCL13 chemokine (C-X-C motif) ligand 13 0.238108
LOXL2 lysyl oxidase-like 2 0.235457
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.234302
RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) 0.228234
BCR breakpoint cluster region 0.227445
HOXA5 homeobox A5 0.226155
CHEK2 checkpoint kinase 2 0.2259
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2 0.224893
PRAME preferentially expressed antigen in melanoma 0.222938
MCM8 minichromosome maintenance complex component 8 0.220831
SP100 SP100 nuclear antigen 0.220378
RRM2 ribonucleotide reductase M2 0.217346
PCDH8 protocadherin 8 0.216325
RPS6 ribosomal protein S6 0.215534
FOXC1 forkhead box C1 0.214765
EGR1 early growth response 1 0.213291
HMGB2 high mobility group box 2 0.213112
CIITA class II, major histocompatibility complex, transactivator 0.187133
PTF1A pancreas specific transcription factor, 1a 0.183998
HOXB7 homeobox B7 0.183969
SDC2 syndecan 2 0.182673
EN2 engrailed homeobox 2 0.182444
ATOH1 atonal homolog 1 (Drosophila) 0.181705
WNT2 wingless-type MMTV integration site family member 2 0.180493
CD58 CD58 molecule 0.180299
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.179496
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.178597
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.178568
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 0.178421
SDC4 syndecan 4 0.178164
PEBP1 phosphatidylethanolamine binding protein 1 0.178058
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 0.177591
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.177368
RASA1 RAS p21 protein activator (GTPase activating protein) 1 0.177352
GJD2 gap junction protein, delta 2, 36kDa 0.176846
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.176148
PAX7 paired box 7 0.17501
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.174457
AQP5 aquaporin 5 0.174437
CD2AP CD2-associated protein 0.174418
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.174064
HAVCR1 hepatitis A virus cellular receptor 1 0.173985
LYZ lysozyme 0.173375
RAG1 recombination activating gene 1 0.172998
BIRC2 baculoviral IAP repeat containing 2 0.172308
TCF3 transcription factor 3 0.172018
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) 0.172018
CD226 CD226 molecule 0.171884
CASQ2 calsequestrin 2 (cardiac muscle) 0.171839
EVPL envoplakin 0.170552
RAG2 recombination activating gene 2 0.170528
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 0.170479
GNLY granulysin 0.169986
NOD1 nucleotide-binding oligomerization domain containing 1 0.169221
CASP7 caspase 7, apoptosis-related cysteine peptidase 0.168853
APAF1 apoptotic peptidase activating factor 1 0.168801
DIABLO diablo, IAP-binding mitochondrial protein 0.16677
HLA-E major histocompatibility complex, class I, E 0.16677
CTRL chymotrypsin-like 0.166654
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.166625
IRF6 interferon regulatory factor 6 0.165293
ICAM2 intercellular adhesion molecule 2 0.165262
IL13 interleukin 13 0.164629
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.164374
CD80 CD80 molecule 0.164374
HPRT1 hypoxanthine phosphoribosyltransferase 1 0.164144
PAX6 paired box 6 0.164078
NLRP3 NLR family, pyrin domain containing 3 0.162001
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.159784
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.159668
CD24 CD24 molecule 0.158609
ICAM1 intercellular adhesion molecule 1 0.15693
CD86 CD86 molecule 0.156888
KLRC1 killer cell lectin-like receptor subfamily C, member 1 0.156337
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.155687
TLR1 toll-like receptor 1 0.155687
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.155687
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.155556
CD22 CD22 molecule 0.155207
ICAM3 intercellular adhesion molecule 3 0.153667
IL15 interleukin 15 0.152399
CD59 CD59 molecule, complement regulatory protein 0.152113
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.151922
BCL6 B-cell CLL/lymphoma 6 0.150647
NOD2 nucleotide-binding oligomerization domain containing 2 0.148915
ACPP acid phosphatase, prostate 0.147974
MMP2 matrix metallopeptidase 2 0.147813
PRDM1 PR domain containing 1, with ZNF domain 0.145749
LOXL1 lysyl oxidase-like 1 0.145749
SULT2B1 sulfotransferase family, cytosolic, 2B, member 1 0.145248
ACVR1 activin A receptor, type I 0.144625
NOTCH1 notch 1 0.144512
LTB lymphotoxin beta (TNF superfamily, member 3) 0.144229
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 0.143071
SMAD2 SMAD family member 2 0.14183
DBN1 drebrin 1 0.141412
NT5E 5'-nucleotidase, ecto (CD73) 0.141412
MKI67 marker of proliferation Ki-67 0.140439
MAP2 microtubule-associated protein 2 0.140378
FLOT1 flotillin 1 0.139705
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.139705
TBX21 T-box 21 0.137687
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A 0.137687
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.136916
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.136134
CAV1 caveolin 1, caveolae protein, 22kDa 0.135411
PYGB phosphorylase, glycogen; brain 0.135083
IGH immunoglobulin heavy locus 0.134882
PYGL phosphorylase, glycogen, liver 0.134882
PYGM phosphorylase, glycogen, muscle 0.134008
SEBOX SEBOX homeobox 0.133266