neuronal cell body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. (Gene Ontology, GO_0043025)
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Genes

288 proteins co-occuring with the neuronal cell body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TH tyrosine hydroxylase 2.48987
TAC1 tachykinin, precursor 1 2.2398
NPY neuropeptide Y 2.19407
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 2.16613
SST somatostatin 2.12385
CHAT choline O-acetyltransferase 2.02638
NPS neuropeptide S 1.97628
NTS neurotensin 1.89523
CRH corticotropin releasing hormone 1.87175
GAL galanin/GMAP prepropeptide 1.82051
ACHE acetylcholinesterase (Yt blood group) 1.75659
CALCA calcitonin-related polypeptide alpha 1.72307
POMC proopiomelanocortin 1.66901
PDYN prodynorphin 1.62413
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 1.59604
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1.57817
PVALB parvalbumin 1.51469
CCK cholecystokinin 1.50904
PNMT phenylethanolamine N-methyltransferase 1.47853
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 1.4774
NGF nerve growth factor (beta polypeptide) 1.47457
VIP vasoactive intestinal peptide 1.46722
CALB1 calbindin 1, 28kDa 1.45477
GHRH growth hormone releasing hormone 1.34174
TRH thyrotropin-releasing hormone 1.34065
SYP synaptophysin 1.19365
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 1.19211
CALB2 calbindin 2 1.18338
MAP2 microtubule-associated protein 2 1.16696
PENK proenkephalin 1.16542
FOS FBJ murine osteosarcoma viral oncogene homolog 1.13983
AVP arginine vasopressin 1.13267
NEFH neurofilament, heavy polypeptide 1.12909
OPRM1 opioid receptor, mu 1 1.11888
MAPT microtubule-associated protein tau 1.11684
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 1.11225
GRP gastrin-releasing peptide 1.08526
BDNF brain-derived neurotrophic factor 0.995632
CARTPT CART prepropeptide 0.978074
PRL prolactin 0.963588
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.944482
CA4 carbonic anhydrase IV 0.933601
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.927483
PPY pancreatic polypeptide 0.920449
HCRT hypocretin (orexin) neuropeptide precursor 0.909251
NTF3 neurotrophin 3 0.889783
RICTOR RPTOR independent companion of MTOR, complex 2 0.889321
MAP1B microtubule-associated protein 1B 0.888859
NGFR nerve growth factor receptor 0.888397
ENO2 enolase 2 (gamma, neuronal) 0.881477
GLS glutaminase 0.879173
GLS2 glutaminase 2 (liver, mitochondrial) 0.879173
MBP myelin basic protein 0.86169
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.855717
GFAP glial fibrillary acidic protein 0.849746
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.827254
NEFM neurofilament, medium polypeptide 0.81257
SYN1 synapsin I 0.785071
BCHE butyrylcholinesterase 0.776841
AGRP agouti related neuropeptide 0.75181
GDNF glial cell derived neurotrophic factor 0.748641
TPH1 tryptophan hydroxylase 1 0.745929
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.711908
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.70439
HMOX2 heme oxygenase 2 0.703949
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled 0.702626
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa 0.702626
MAG myelin associated glycoprotein 0.691202
APP amyloid beta (A4) precursor protein 0.682899
SNCB synuclein, beta 0.675065
VN1R4 vomeronasal 1 receptor 4 0.660776
VN1R2 vomeronasal 1 receptor 2 0.660776
ZNF677 zinc finger protein 677 0.660776
NCAM1 neural cell adhesion molecule 1 0.659482
CDK5 cyclin-dependent kinase 5 0.654741
CHGA chromogranin A 0.64958
OXT oxytocin/neurophysin I prepropeptide 0.64915
UTS2 urotensin 2 0.644858
TACR1 tachykinin receptor 1 0.644429
NTF4 neurotrophin 4 0.644001
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.642715
ELAVL3 ELAV like neuron-specific RNA binding protein 3 0.634159
GAP43 growth associated protein 43 0.617557
TRPV1 transient receptor potential cation channel, subfamily V, member 1 0.615013
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like 0.614589
GAST gastrin 0.611625
PHF1 PHD finger protein 1 0.604862
PRLH prolactin releasing hormone 0.597697
MAP4 microtubule-associated protein 4 0.593492
GRM1 glutamate receptor, metabotropic 1 0.593492
GRM2 glutamate receptor, metabotropic 2 0.587199
CRHR1 corticotropin releasing hormone receptor 1 0.568001
NPPA natriuretic peptide A 0.565508
ADRA2A adrenoceptor alpha 2A 0.564262
ADRA2C adrenoceptor alpha 2C 0.564262
GALP galanin-like peptide 0.561772
KCTD16 potassium channel tetramerization domain containing 16 0.556387
DPP7 dipeptidyl-peptidase 7 0.552664
INA internexin neuronal intermediate filament protein, alpha 0.547297
NPBWR1 neuropeptides B/W receptor 1 0.545236
GCG glucagon 0.539883
UTS2B urotensin 2B 0.537827
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 0.529618
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 0.528388
FAM134C family with sequence similarity 134, member C 0.523476
SAG S-antigen; retina and pineal gland (arrestin) 0.517348
IARS isoleucyl-tRNA synthetase 0.511233
ABAT 4-aminobutyrate aminotransferase 0.510418
GLUL glutamate-ammonia ligase 0.509197
CEND1 cell cycle exit and neuronal differentiation 1 0.508383
NMU neuromedin U 0.506757
TUBA1A tubulin, alpha 1a 0.503506
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.500664
GRIK1 glutamate receptor, ionotropic, kainate 1 0.499853
ACPP acid phosphatase, prostate 0.499447
NEFL neurofilament, light polypeptide 0.490944
IL17B interleukin 17B 0.490539
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 0.4865
HDC histidine decarboxylase 0.473617
DNM2 dynamin 2 0.468802
OPRK1 opioid receptor, kappa 1 0.468401
PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C 0.4676
UCN urocortin 0.465998
SDF4 stromal cell derived factor 4 0.465598
PALM paralemmin 0.463598
ESR2 estrogen receptor 2 (ER beta) 0.461998
PRNP prion protein 0.456809
FGF2 fibroblast growth factor 2 (basic) 0.454019
MAOB monoamine oxidase B 0.451631
UTS2R urotensin 2 receptor 0.447259
SOD2 superoxide dismutase 2, mitochondrial 0.439333
GRM5 glutamate receptor, metabotropic 5 0.43696
LEP leptin 0.431041
AIF1 allograft inflammatory factor 1 0.424745
NMNAT1 nicotinamide nucleotide adenylyltransferase 1 0.419644
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1 0.416511
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.413382
GLG1 golgi glycoprotein 1 0.41143
RTN4 reticulon 4 0.404415
PSEN1 presenilin 1 0.403248
INS insulin 0.402859
TMEM100 transmembrane protein 100 0.400916
IFT122 intraflagellar transport 122 0.397423
SCG2 secretogranin II 0.395485
KISS1R KISS1 receptor 0.393936
ESR1 estrogen receptor 1 0.393936
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2 0.393162
ATF3 activating transcription factor 3 0.390455
ANK2 ankyrin 2, neuronal 0.384665
MYO5A myosin VA (heavy chain 12, myoxin) 0.380814
IGKV1-17 immunoglobulin kappa variable 1-17 0.375818
HEXA hexosaminidase A (alpha polypeptide) 0.374666
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 0.372366
CRCP CGRP receptor component 0.371599
SCN10A sodium channel, voltage gated, type X alpha subunit 0.37045
IGF1 insulin-like growth factor 1 (somatomedin C) 0.367388
CRHBP corticotropin releasing hormone binding protein 0.365095
ALB albumin 0.362804
CLDN11 claudin 11 0.360896
CTSD cathepsin D 0.359752
LEPR leptin receptor 0.357847
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.355563
FTL ferritin, light polypeptide 0.352901
TECTA tectorin alpha 0.351382
OPN4 opsin 4 0.344178
KRT79 keratin 79, type II 0.343799
JUN jun proto-oncogene 0.343799
EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 0.340773
TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1 0.338506
CNTF ciliary neurotrophic factor 0.333225
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 0.329837
FTH1 ferritin, heavy polypeptide 1 0.329837
SNCG synuclein, gamma (breast cancer-specific protein 1) 0.329084
ALPP alkaline phosphatase, placental 0.322325
OTOS otospiralin 0.319328
CA2 carbonic anhydrase II 0.316708
NPFF neuropeptide FF-amide peptide precursor 0.313344
GUCY2C guanylate cyclase 2C 0.312224
THY1 Thy-1 cell surface antigen 0.311478
CRYAB crystallin, alpha B 0.311105
NPAT nuclear protein, ataxia-telangiectasia locus 0.306632
ALPPL2 alkaline phosphatase, placental-like 2 0.305515
MT3 metallothionein 3 0.305515
ALPL alkaline phosphatase, liver/bone/kidney 0.305143
NPR1 natriuretic peptide receptor 1 0.304399
TNR tenascin R 0.30254
MLN motilin 0.296972
PYY peptide YY 0.29623
ARTN artemin 0.295489
APLNR apelin receptor 0.292527
PDE10A phosphodiesterase 10A 0.291417
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.288829
NPW neuropeptide W 0.286614
ADA adenosine deaminase 0.284401
CHRM4 cholinergic receptor, muscarinic 4 0.283663
GYPE glycophorin E (MNS blood group) 0.282558
SYNPR synaptoporin 0.277774
GHRL ghrelin/obestatin prepropeptide 0.274835
DES desmin 0.273734
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3 0.2719
SLC38A1 solute carrier family 38, member 1 0.268969
CA1 carbonic anhydrase I 0.268237
TAC3 tachykinin 3 0.267871
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 0.267505
B3GAT1 beta-1,3-glucuronyltransferase 1 0.267139
TG thyroglobulin 0.259837
ELSPBP1 epididymal sperm binding protein 1 0.259837
NMNAT3 nicotinamide nucleotide adenylyltransferase 3 0.258381
CHRM2 cholinergic receptor, muscarinic 2 0.256925
ACE angiotensin I converting enzyme 0.256561
PTH2 parathyroid hormone 2 0.25547
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.254017
PSPN persephin 0.252564
CDH7 cadherin 7, type 2 0.252564
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.250751
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.243879
APOE apolipoprotein E 0.243519
TACR3 tachykinin receptor 3 0.241356
CNR1 cannabinoid receptor 1 (brain) 0.240276
TRNAU1AP tRNA selenocysteine 1 associated protein 1 0.239916
NES nestin 0.239557
CDH19 cadherin 19, type 2 0.238478
MC3R melanocortin 3 receptor 0.23776
QPCT glutaminyl-peptide cyclotransferase 0.236683
HTT huntingtin 0.228108
CNTN6 contactin 6 0.227041
PNPLA6 patatin-like phospholipase domain containing 6 0.226331
MAP1A microtubule-associated protein 1A 0.225976
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.22173
CGA glycoprotein hormones, alpha polypeptide 0.221378
PALMD palmdelphin 0.217861
NOS1 nitric oxide synthase 1 (neuronal) 0.21716
DLEU2L deleted in lymphocytic leukemia 2-like 0.215761
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.211933
PAM peptidylglycine alpha-amidating monooxygenase 0.210894
GH1 growth hormone 1 0.210203
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.207108
TSPO translocator protein (18kDa) 0.207108
SCGN secretagogin, EF-hand calcium binding protein 0.204718
GIGYF2 GRB10 interacting GYF protein 2 0.203361
NRTN neurturin 0.202009
FRMD3 FERM domain containing 3 0.199993
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 0.199325
ZC3H14 zinc finger CCCH-type containing 14 0.198991
CTSS cathepsin S 0.198658
KLK1 kallikrein 1 0.198658
MAOA monoamine oxidase A 0.198658
HYAL4 hyaluronoglucosaminidase 4 0.194698
CDAN1 codanin 1 0.193719
GCH1 GTP cyclohydrolase 1 0.193394
LHB luteinizing hormone beta polypeptide 0.192746
EPM2AIP1 EPM2A (laforin) interacting protein 1 0.1921
NUCB2 nucleobindin 2 0.191135
TARDBP TAR DNA binding protein 0.191135
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.190814
HAPLN4 hyaluronan and proteoglycan link protein 4 0.190495
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4 0.190175
SCN3A sodium channel, voltage gated, type III alpha subunit 0.190175
CA13 carbonic anhydrase XIII 0.188274
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 0.186708
QKI QKI, KH domain containing, RNA binding 0.186397
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 0.186397
IL1B interleukin 1, beta 0.183935
NLN neurolysin (metallopeptidase M3 family) 0.183025
NPPC natriuretic peptide C 0.18093
ACTG1 actin gamma 1 0.180634
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 0.179752
IGKV3-20 immunoglobulin kappa variable 3-20 0.178011
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 0.177154
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.176024
GLB1 galactosidase, beta 1 0.175466
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 0.174087
PVR poliovirus receptor 0.173543
CHRM1 cholinergic receptor, muscarinic 1 0.173003
TF transferrin 0.171937
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.170888
NRCAM neuronal cell adhesion molecule 0.170371
ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 0.169604
MRRF mitochondrial ribosome recycling factor 0.168101
ACTB actin, beta 0.167856
GNG2 guanine nucleotide binding protein (G protein), gamma 2 0.164315
IGSF6 immunoglobulin superfamily, member 6 0.162546
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.16233
CTSB cathepsin B 0.161484
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime 0.161275
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 0.158129
CLMN calmin (calponin-like, transmembrane) 0.158129
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.156863