mrna cleavage factor complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules. (Gene Ontology, GO_0005849)
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52 proteins co-occuring with the mrna cleavage factor complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 2.79192
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 2.7189
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 2.56713
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 2.46482
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 1.99833
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 1.95583
PCF11 PCF11 cleavage and polyadenylation factor subunit 1.66719
SYMPK symplekin 1.48362
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 1.33359
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa 1.29585
WDR33 WD repeat domain 33 1.20808
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa 1.20601
BARD1 BRCA1 associated RING domain 1 1.08933
INTS9 integrator complex subunit 9 1.06853
DSE dermatan sulfate epimerase 1.03579
INTS6 integrator complex subunit 6 0.99956
MPZL2 myelin protein zero-like 2 0.919046
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.905996
CPSF3L cleavage and polyadenylation specific factor 3-like 0.841941
FGG fibrinogen gamma chain 0.818534
SRSF3 serine/arginine-rich splicing factor 3 0.798353
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 0.755891
EEF1G eukaryotic translation elongation factor 1 gamma 0.728389
FIP1L1 factor interacting with PAPOLA and CPSF1 0.717236
PARN poly(A)-specific ribonuclease 0.617557
LSM11 LSM11, U7 small nuclear RNA associated 0.598538
BRAP BRCA1 associated protein 0.570496
GTF2B general transcription factor IIB 0.533719
STRBP spermatid perinuclear RNA binding protein 0.519389
NCBP2 nuclear cap binding protein subunit 2, 20kDa 0.502693
PTBP1 polypyrimidine tract binding protein 1 0.492966
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 0.440916
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.414946
MBNL1 muscleblind-like splicing regulator 1 0.401693
CDC73 cell division cycle 73 0.397423
FGB fibrinogen beta chain 0.388137
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) 0.381969
ERAP1 endoplasmic reticulum aminopeptidase 1 0.370067
UBA1 ubiquitin-like modifier activating enzyme 1 0.364713
FGA fibrinogen alpha chain 0.347967
CDK8 cyclin-dependent kinase 8 0.308867
SLBP stem-loop binding protein 0.29994
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.258016
TAT tyrosine aminotransferase 0.244601
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.242076
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.232744
MMP10 matrix metallopeptidase 10 0.190495
ADSL adenylosuccinate lyase 0.166167
CDK9 cyclin-dependent kinase 9 0.134259
PTPN3 protein tyrosine phosphatase, non-receptor type 3 0.131099
HAMP hepcidin antimicrobial peptide 0.128897
HSF1 heat shock transcription factor 1 0.128876