mismatch repair complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any complex formed of proteins that act in mismatch repair. (Gene Ontology, GO_0032300)
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Genes

74 proteins co-occuring with the mismatch repair complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MSH2 mutS homolog 2 2.99777
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 2.72069
MLH1 mutL homolog 1 2.69479
MSH6 mutS homolog 6 2.5187
MSH3 mutS homolog 3 2.29317
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) 1.6036
MLH3 mutL homolog 3 1.37243
EXO1 exonuclease 1 1.2288
POLH polymerase (DNA directed), eta 1.11786
UNG uracil-DNA glycosylase 1.01833
PCNA proliferating cell nuclear antigen 1.00054
ERCC1 excision repair cross-complementation group 1 0.970331
SLX4IP SLX4 interacting protein 0.935488
DTX2 deltex 2, E3 ubiquitin ligase 0.87733
CCDC26 CCDC26 long non-coding RNA 0.824041
AICDA activation-induced cytidine deaminase 0.806606
GH2 growth hormone 2 0.790106
MUTYH mutY homolog 0.736014
ERCC4 excision repair cross-complementation group 4 0.728836
TLE6 transducin-like enhancer of split 6 0.723472
PHLDB1 pleckstrin homology-like domain, family B, member 1 0.711465
TERF2IP telomeric repeat binding factor 2, interacting protein 0.637578
OGG1 8-oxoguanine DNA glycosylase 0.591812
CHEK1 checkpoint kinase 1 0.582176
PLRG1 pleiotropic regulator 1 0.555145
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.544
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 0.539472
RAD23B RAD23 homolog B (S. cerevisiae) 0.52675
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.513677
RFC3 replication factor C (activator 1) 3, 38kDa 0.50107
RFC5 replication factor C (activator 1) 5, 36.5kDa 0.498636
RFC4 replication factor C (activator 1) 4, 37kDa 0.49742
RFC1 replication factor C (activator 1) 1, 145kDa 0.477636
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog 0.477233
GH1 growth hormone 1 0.477233
HUS1 HUS1 checkpoint homolog (S. pombe) 0.473617
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.448054
RFC2 replication factor C (activator 1) 2, 40kDa 0.446465
RAD9A RAD9 homolog A (S. pombe) 0.399751
HMGB1 high mobility group box 1 0.365095
KRAS Kirsten rat sarcoma viral oncogene homolog 0.347587
RAD50 RAD50 homolog (S. cerevisiae) 0.336996
XPC xeroderma pigmentosum, complementation group C 0.334356
BCAS2 breast carcinoma amplified sequence 2 0.312597
NOTO notochord homeobox 0.298084
XPA xeroderma pigmentosum, complementation group A 0.284401
BRCA1 breast cancer 1, early onset 0.280349
RNASEH1 ribonuclease H1 0.258016
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.252927
SLX4 SLX4 structure-specific endonuclease subunit 0.251839
HRAS Harvey rat sarcoma viral oncogene homolog 0.24713
WRN Werner syndrome, RecQ helicase-like 0.24713
FANCF Fanconi anemia, complementation group F 0.231315
TERF2 telomeric repeat binding factor 2 0.219969
ATM ATM serine/threonine kinase 0.208481
NBN nibrin 0.207794
CDC5L cell division cycle 5-like 0.201672
RAD52 RAD52 homolog (S. cerevisiae) 0.195025
TP53 tumor protein p53 0.189222
CLSPN claspin 0.179167
PRPF19 pre-mRNA processing factor 19 0.158882
RUNX3 runt-related transcription factor 3 0.141585
RAD17 RAD17 homolog (S. pombe) 0.136611
TOPBP1 topoisomerase (DNA) II binding protein 1 0.133921
ERCC6 excision repair cross-complementation group 6 0.124625
BRCA2 breast cancer 2, early onset 0.122945
FXN frataxin 0.118534
DHFR dihydrofolate reductase 0.118024
TSC1 tuberous sclerosis 1 0.117016
HPRT1 hypoxanthine phosphoribosyltransferase 1 0.116425
RING1 ring finger protein 1 0.116361
CFH complement factor H 0.113918
APRT adenine phosphoribosyltransferase 0.113441
CDA cytidine deaminase 0.11333