mesothelioma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

165 proteins co-occuring with the tissue mesothelioma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
POLA2 polymerase (DNA directed), alpha 2, accessory subunit 1.41261
NF2 neurofibromin 2 (merlin) 1.26352
MSLN mesothelin 1.25726
LRRN4 leucine rich repeat neuronal 4 1.21713
RPL18A ribosomal protein L18a 1.21624
BCL2L1 BCL2-like 1 1.19223
AKT1 v-akt murine thymoma viral oncogene homolog 1 1.02118
UPK3B uroplakin 3B 0.939206
BIRC5 baculoviral IAP repeat containing 5 0.934911
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.934482
CDKN2A cyclin-dependent kinase inhibitor 2A 0.92291
TP53 tumor protein p53 0.914361
PUF60 poly-U binding splicing factor 60KDa 0.862206
BAX BCL2-associated X protein 0.844126
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.831129
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.802293
SP1 Sp1 transcription factor 0.788131
RBM8A RNA binding motif protein 8A 0.752057
TYMS thymidylate synthetase 0.746689
RAB12 RAB12, member RAS oncogene family 0.746689
DIO2 deiodinase, iodothyronine, type II 0.741327
EGFR epidermal growth factor receptor 0.7146
RECQL5 RecQ protein-like 5 0.70886
AXL AXL receptor tyrosine kinase 0.698625
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.695354
PDGFD platelet derived growth factor D 0.679025
PRPF19 pre-mRNA processing factor 19 0.675765
MMP2 matrix metallopeptidase 2 0.673728
CCND1 cyclin D1 0.65543
RRM1 ribonucleotide reductase M1 0.649344
WIF1 WNT inhibitory factor 1 0.64529
GCSH glycine cleavage system protein H (aminomethyl carrier) 0.625061
MDK midkine (neurite growth-promoting factor 2) 0.619007
DVL1 dishevelled segment polarity protein 1 0.613764
PSMB5 proteasome (prosome, macropain) subunit, beta type, 5 0.612958
SCNN1D sodium channel, non voltage gated 1 delta subunit 0.601686
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.59124
SECISBP2 SECIS binding protein 2 0.589234
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) 0.58282
SPARCL1 SPARC-like 1 (hevin) 0.571219
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.568823
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.568424
DIRC2 disrupted in renal carcinoma 2 0.565631
CHEK1 checkpoint kinase 1 0.549312
AHNAK AHNAK nucleoprotein 0.546929
TGFBI transforming growth factor, beta-induced, 68kDa 0.545739
POLD1 polymerase (DNA directed), delta 1, catalytic subunit 0.538209
FOLR1 folate receptor 1 (adult) 0.529113
COPA coatomer protein complex, subunit alpha 0.524771
CUL4A cullin 4A 0.518859
PDGFA platelet-derived growth factor alpha polypeptide 0.517284
IFNA1 interferon, alpha 1 0.51453
BST1 bone marrow stromal cell antigen 1 0.510992
DHDH dihydrodiol dehydrogenase (dimeric) 0.508242
CALB2 calbindin 2 0.507064
HMBS hydroxymethylbilane synthase 0.505495
CD46 CD46 molecule, complement regulatory protein 0.498832
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.493745
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 0.493354
ARHGAP32 Rho GTPase activating protein 32 0.4914
TYMP thymidine phosphorylase 0.489057
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.489057
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.484376
CLMP CXADR-like membrane protein 0.481259
PRCP prolylcarboxypeptidase (angiotensinase C) 0.47348
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.473092
DVL3 dishevelled segment polarity protein 3 0.471151
ZHX2 zinc fingers and homeoboxes 2 0.467273
MET MET proto-oncogene, receptor tyrosine kinase 0.460692
WT1 Wilms tumor 1 0.454898
PIAS3 protein inhibitor of activated STAT, 3 0.447192
XAF1 XIAP associated factor 1 0.443347
TNC tenascin C 0.44181
CCNH cyclin H 0.430695
ERCC1 excision repair cross-complementation group 1 0.429165
HRK harakiri, BCL2 interacting protein 0.424963
TPBG trophoblast glycoprotein 0.423818
DPYD dihydropyrimidine dehydrogenase 0.42191
TNFAIP6 tumor necrosis factor, alpha-induced protein 6 0.418099
MAPK7 mitogen-activated protein kinase 7 0.416957
HDAC2 histone deacetylase 2 0.405176
SOD2 superoxide dismutase 2, mitochondrial 0.401765
VIMP VCP-interacting membrane selenoprotein 0.396465
MCL1 myeloid cell leukemia 1 0.396465
RIPK2 receptor-interacting serine-threonine kinase 2 0.395709
GREM1 gremlin 1, DAN family BMP antagonist 0.388912
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 0.388535
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.386273
DHFR dihydrofolate reductase 0.378748
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.375743
YAP1 Yes-associated protein 1 0.372369
SLC46A1 solute carrier family 46 (folate transporter), member 1 0.367502
MTAP methylthioadenosine phosphorylase 0.358919
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 0.357802
MAPK9 mitogen-activated protein kinase 9 0.355942
PRDX5 peroxiredoxin 5 0.347778
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.344818
FGF2 fibroblast growth factor 2 (basic) 0.342602
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.342602
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 0.337808
SFRP4 secreted frizzled-related protein 4 0.336704
VEGFA vascular endothelial growth factor A 0.3356
PDPK1 3-phosphoinositide dependent protein kinase 1 0.33413
CDH3 cadherin 3, type 1, P-cadherin (placental) 0.333028
SDC1 syndecan 1 0.328994
C19ORF48 chromosome 19 open reading frame 48 0.32753
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.32497
CASP4 caspase 4, apoptosis-related cysteine peptidase 0.31187
CDC6 cell division cycle 6 0.308974
GABARAP GABA(A) receptor-associated protein 0.306083
CHEK2 checkpoint kinase 2 0.301398
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.297089
PDGFB platelet-derived growth factor beta polypeptide 0.288514
FN1 fibronectin 1 0.283899
CD9 CD9 molecule 0.276846
JUNB jun B proto-oncogene 0.267446
FANCD2 Fanconi anemia, complementation group D2 0.263327
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.259929
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.256568
IL4R interleukin 4 receptor 0.254239
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.248361
NT5C 5', 3'-nucleotidase, cytosolic 0.243294
IL6 interleukin 6 0.242363
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.241746
EMD emerin 0.233162
IGFBP4 insulin-like growth factor binding protein 4 0.230931
JUN jun proto-oncogene 0.226155
GJA4 gap junction protein, alpha 4, 37kDa 0.224893
MMP9 matrix metallopeptidase 9 0.223906
PDPN podoplanin 0.22246
IGHV3-30 immunoglobulin heavy variable 3-30 0.220604
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.217346
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.21573
IL3 interleukin 3 0.20191
TGFB2 transforming growth factor, beta 2 0.19592
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.194698
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.188031
FGFR2 fibroblast growth factor receptor 2 0.18603
FGFR1 fibroblast growth factor receptor 1 0.185751
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1 0.180468
IL32 interleukin 32 0.180359
ZEB2 zinc finger E-box binding homeobox 2 0.180359
IGFBP3 insulin-like growth factor binding protein 3 0.179954
IFNGR1 interferon gamma receptor 1 0.179861
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.179729
HTRA1 HtrA serine peptidase 1 0.179206
NTSR1 neurotensin receptor 1 (high affinity) 0.178246
EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 0.178034
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.178012
DPP4 dipeptidyl-peptidase 4 0.17762
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.176543
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 0.175738
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.172504
NLRP3 NLR family, pyrin domain containing 3 0.171915
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2 0.171241
ZEB1 zinc finger E-box binding homeobox 1 0.170944
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 0.170094
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.170059
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.169743
CCND3 cyclin D3 0.16632
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.166112
PLG plasminogen 0.16573
HMOX1 heme oxygenase 1 0.164724
S100A4 S100 calcium binding protein A4 0.164724
F3 coagulation factor III (thromboplastin, tissue factor) 0.163063