mesenchymal stromal cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Fibroblast-like cells that can be isolated from a variety of tissues, such as bone marrow, periosteum, trabecular bone, adipose tissue, synovium, skeletal muscle, dental pulp. (BRENDA Tissue and Enzyme Source Ontology, BTO_0003952)
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Genes

209 proteins co-occuring with the tissue mesenchymal stromal cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
THY1 Thy-1 cell surface antigen 1.79499
CD34 CD34 molecule 1.7139
MCAM melanoma cell adhesion molecule 1.63406
CD44 CD44 molecule (Indian blood group) 1.50244
RUNX2 runt-related transcription factor 2 1.44218
CXCL12 chemokine (C-X-C motif) ligand 12 1.4057
ALPL alkaline phosphatase, liver/bone/kidney 1.30883
KRTAP13-3 keratin associated protein 13-3 1.30073
BMP2 bone morphogenetic protein 2 1.29534
ALPPL2 alkaline phosphatase, placental-like 2 1.27919
ALPP alkaline phosphatase, placental 1.2774
BGLAP bone gamma-carboxyglutamate (gla) protein 1.24744
ACAN aggrecan 1.23628
NGFR nerve growth factor receptor 1.18468
NANOG Nanog homeobox 1.18113
IDO1 indoleamine 2,3-dioxygenase 1 1.16914
SOX9 SRY (sex determining region Y)-box 9 1.14432
SOX2 SRY (sex determining region Y)-box 2 1.07883
SPP1 secreted phosphoprotein 1 1.06691
NES nestin 1.03566
WNT5A wingless-type MMTV integration site family, member 5A 0.985425
FGF2 fibroblast growth factor 2 (basic) 0.960744
IBSP integrin-binding sialoprotein 0.953409
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.951685
HBA1 hemoglobin, alpha 1 0.946947
HBA2 hemoglobin, alpha 2 0.932766
CXCR4 chemokine (C-X-C motif) receptor 4 0.929335
VCAM1 vascular cell adhesion molecule 1 0.89817
HLA-G major histocompatibility complex, class I, G 0.859679
SP7 Sp7 transcription factor 0.824849
VEGFA vascular endothelial growth factor A 0.820248
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.804796
FN1 fibronectin 1 0.788131
IGF1 insulin-like growth factor 1 (somatomedin C) 0.76364
COL2A1 collagen, type II, alpha 1 0.757432
BDNF brain-derived neurotrophic factor 0.742976
FOXP3 forkhead box P3 0.74174
IL6 interleukin 6 0.717882
ZNF267 zinc finger protein 267 0.71583
HLA-C major histocompatibility complex, class I, C 0.71583
MMP13 matrix metallopeptidase 13 0.711319
UPRT uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) 0.708041
FABP4 fatty acid binding protein 4, adipocyte 0.698625
GATA4 GATA binding protein 4 0.696989
INHBE inhibin, beta E 0.691676
PROM1 prominin 1 0.686776
KLF4 Kruppel-like factor 4 (gut) 0.658678
TERT telomerase reverse transcriptase 0.652183
RPL13A ribosomal protein L13a 0.646911
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.644884
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma 0.635572
GEMIN5 gem (nuclear organelle) associated protein 5 0.626273
COL10A1 collagen, type X, alpha 1 0.61578
PDIA6 protein disulfide isomerase family A, member 6 0.610541
IGFBP2 insulin-like growth factor binding protein 2, 36kDa 0.609332
CD4 CD4 molecule 0.60893
VWF von Willebrand factor 0.605709
IL10 interleukin 10 0.603697
CD38 CD38 molecule 0.598469
C1QTNF3 C1q and tumor necrosis factor related protein 3 0.595656
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.594451
PPARG peroxisome proliferator-activated receptor gamma 0.592444
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.592444
CCL2 chemokine (C-C motif) ligand 2 0.592043
JAG1 jagged 1 0.588431
TCF4 transcription factor 4 0.586026
NOTCH1 notch 1 0.573616
CCL5 chemokine (C-C motif) ligand 5 0.566828
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1 0.556467
ZNF2 zinc finger protein 2 0.554876
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.551298
ANGPTL5 angiopoietin-like 5 0.548914
FSTL1 follistatin-like 1 0.548517
TNK1 tyrosine kinase, non-receptor, 1 0.544549
MYH13 myosin, heavy chain 13, skeletal muscle 0.540981
KDR kinase insert domain receptor 0.5228
ICAM1 intercellular adhesion molecule 1 0.517284
CXCL13 chemokine (C-X-C motif) ligand 13 0.51571
CD19 CD19 molecule 0.505495
TLR3 toll-like receptor 3 0.501574
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.496874
THPO thrombopoietin 0.493354
JAK2 Janus kinase 2 0.492182
HOXB4 homeobox B4 0.489057
TNNI3 troponin I type 3 (cardiac) 0.482038
ANXA5 annexin A5 0.481259
KRT3 keratin 3, type II 0.48048
EPO erythropoietin 0.476589
ANGPT1 angiopoietin 1 0.463787
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.462239
CCL25 chemokine (C-C motif) ligand 25 0.461078
DPPA5 developmental pluripotency associated 5 0.451428
CD46 CD46 molecule, complement regulatory protein 0.450657
TBX1 T-box 1 0.442194
PDGFB platelet-derived growth factor beta polypeptide 0.439507
BMP7 bone morphogenetic protein 7 0.439507
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.438739
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.435672
CD69 CD69 molecule 0.433757
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.428401
DLK1 delta-like 1 homolog (Drosophila) 0.427636
NRG4 neuregulin 4 0.42649
GCFC2 GC-rich sequence DNA-binding factor 2 0.426109
TLR4 toll-like receptor 4 0.423818
DLX5 distal-less homeobox 5 0.420766
BMP4 bone morphogenetic protein 4 0.420385
FLT3 fms-related tyrosine kinase 3 0.416576
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.415434
PUM1 pumilio RNA-binding family member 1 0.415053
TIMP1 TIMP metallopeptidase inhibitor 1 0.406315
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.405935
LGALS1 lectin, galactoside-binding, soluble, 1 0.404797
CDY2A chromodomain protein, Y-linked, 2A 0.404418
ACTC1 actin, alpha, cardiac muscle 1 0.401007
INS insulin 0.3976
GFAP glial fibrillary acidic protein 0.390421
FGF1 fibroblast growth factor 1 (acidic) 0.387027
TNNT2 troponin T type 2 (cardiac) 0.385896
ADGRE5 adhesion G protein-coupled receptor E5 0.384013
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 0.383637
ADIG adipogenin 0.382508
TGFB1 transforming growth factor, beta 1 0.382131
COL1A1 collagen, type I, alpha 1 0.380627
BMP6 bone morphogenetic protein 6 0.380251
SLC25A30 solute carrier family 25, member 30 0.379499
CSF3 colony stimulating factor 3 (granulocyte) 0.379123
GLCE glucuronic acid epimerase 0.377621
ALB albumin 0.371994
GJA1 gap junction protein, alpha 1, 43kDa 0.371619
DLL3 delta-like 3 (Drosophila) 0.366381
DMD dystrophin 0.36526
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5 0.360782
CD80 CD80 molecule 0.355942
NCAM1 neural cell adhesion molecule 1 0.354826
SFTPC surfactant protein C 0.35334
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 0.352598
MFAP5 microfibrillar associated protein 5 0.351114
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.344818
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 0.344818
GDNF glial cell derived neurotrophic factor 0.344449
IVD isovaleryl-CoA dehydrogenase 0.342971
DNER delta/notch-like EGF repeat containing 0.33965
FLT1 fms-related tyrosine kinase 1 0.338545
ARG1 arginase 1 0.330827
MST1 macrophage stimulating 1 0.33046
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 0.327164
THBS2 thrombospondin 2 0.319498
MEF2C myocyte enhancer factor 2C 0.319134
EPHA6 EPH receptor A6 0.318407
SPINT2 serine peptidase inhibitor, Kunitz type, 2 0.315861
FGFR2 fibroblast growth factor receptor 2 0.314409
IL3RA interleukin 3 receptor, alpha (low affinity) 0.314046
MYOG myogenin (myogenic factor 4) 0.31187
EPHA8 EPH receptor A8 0.310783
EPOR erythropoietin receptor 0.305722
CDY1B chromodomain protein, Y-linked, 1B 0.303919
CD163 CD163 molecule 0.303559
CD86 CD86 molecule 0.301758
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.300679
ANGPTL1 angiopoietin-like 1 0.29996
LGALS9 lectin, galactoside-binding, soluble, 9 0.299242
TNF tumor necrosis factor 0.29673
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11 0.29673
MSC musculin 0.292079
MET MET proto-oncogene, receptor tyrosine kinase 0.289582
MST1R macrophage stimulating 1 receptor 0.286736
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.282483
PRDM14 PR domain containing 14 0.281776
CXCL2 chemokine (C-X-C motif) ligand 2 0.28107
IL11 interleukin 11 0.277197
TSPO translocator protein (18kDa) 0.271952
MYLIP myosin regulatory light chain interacting protein 0.270214
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.268482
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.268137
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.264011
CXCL5 chemokine (C-X-C motif) ligand 5 0.261964
WNT10B wingless-type MMTV integration site family, member 10B 0.261284
KLRK1 killer cell lectin-like receptor subfamily K, member 1 0.260267
MMP2 matrix metallopeptidase 2 0.259591
WNT2 wingless-type MMTV integration site family member 2 0.257237
TLR2 toll-like receptor 2 0.252919
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.25259
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.247399
NRG3 neuregulin 3 0.243294
DCAF6 DDB1 and CUL4 associated factor 6 0.238406
MMP9 matrix metallopeptidase 9 0.236921
FRZB frizzled-related protein 0.23459
MYL12B myosin, light chain 12B, regulatory 0.232881
TPCN1 two pore segment channel 1 0.232599
GDF3 growth differentiation factor 3 0.232599
TFRC transferrin receptor 0.232317
NGF nerve growth factor (beta polypeptide) 0.230656
WNT3A wingless-type MMTV integration site family, member 3A 0.229299
SFRP1 secreted frizzled-related protein 1 0.22797
LIG4 ligase IV, DNA, ATP-dependent 0.227707
ULBP3 UL16 binding protein 3 0.227707
GDI2 GDP dissociation inhibitor 2 0.226155
PCNA proliferating cell nuclear antigen 0.2259
FAP fibroblast activation protein, alpha 0.225144
TLR6 toll-like receptor 6 0.223419
GGCX gamma-glutamyl carboxylase 0.222699
CD200 CD200 molecule 0.221755
JAK1 Janus kinase 1 0.221291
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase 0.218398
COL7A1 collagen, type VII, alpha 1 0.218186
EPHB4 EPH receptor B4 0.217974
IGF2 insulin-like growth factor 2 0.21573
SH3BP2 SH3-domain binding protein 2 0.215147
IL7 interleukin 7 0.214202