mesenchymal cell neoplasm Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic connective tissue that is capable of developing into connective tissue, such as bone, and cartilage, the lymphatic system, and the circulatory system. (Human Disease Ontology, DOID_3350)
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Genes

163 genes co-occuring with the disease mesenchymal cell neoplasm in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
CD34 CD34 molecule 1.96567
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 1.83954
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 1.70907
FGF23 fibroblast growth factor 23 1.54363
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 1.41183
HBA1 hemoglobin, alpha 1 1.20613
HBA2 hemoglobin, alpha 2 1.18109
ANO1 anoctamin 1, calcium activated chloride channel 1.1635
STOML3 stomatin (EPB72)-like 3 1.16008
MLANA melan-A 1.12108
SS18 synovial sarcoma translocation, chromosome 18 1.05345
MYOG myogenin (myogenic factor 4) 1.04041
CALD1 caldesmon 1 0.991487
ENO2 enolase 2 (gamma, neuronal) 0.9839
KRT8 keratin 8, type II 0.965405
F8 coagulation factor VIII, procoagulant component 0.953273
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 0.880653
EWSR1 EWS RNA-binding protein 1 0.866321
MYOD1 myogenic differentiation 1 0.856087
CREB3L2 cAMP responsive element binding protein 3-like 2 0.819206
CD68 CD68 molecule 0.815514
EP400 E1A binding protein p400 0.804026
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.801154
PHF1 PHD finger protein 1 0.781069
GFAP glial fibrillary acidic protein 0.732191
LHFP lipoma HMGIC fusion partner 0.714005
SYP synaptophysin 0.705949
CTAG1A cancer/testis antigen 1A 0.665563
KRT7 keratin 7, type II 0.663578
MB myoglobin 0.65763
CALB2 calbindin 2 0.652484
CTAG1B cancer/testis antigen 1B 0.651298
KIF18A kinesin family member 18A 0.650508
NCAM1 neural cell adhesion molecule 1 0.638676
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 0.637495
GRAP GRB2-related adaptor protein 0.635135
FXYD5 FXYD domain containing ion transport regulator 5 0.631598
KRT5 keratin 5, type II 0.618268
KRT20 keratin 20, type I 0.586276
S100P S100 calcium binding protein P 0.585108
PF4V1 platelet factor 4 variant 1 0.571495
B3GAT1 beta-1,3-glucuronyltransferase 1 0.570329
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.567997
ZEB2 zinc finger E-box binding homeobox 2 0.567609
PTPRC protein tyrosine phosphatase, receptor type, C 0.5645
FREM2 FRAS1 related extracellular matrix protein 2 0.547419
TP53 tumor protein p53 0.524588
PANX2 pannexin 2 0.512648
CAMTA1 calmodulin binding transcription activator 1 0.501144
PRKCB protein kinase C, beta 0.500379
SIVA1 SIVA1, apoptosis-inducing factor 0.496939
HMGA2 high mobility group AT-hook 2 0.489691
TWIST1 twist family bHLH transcription factor 1 0.482084
SSX1 synovial sarcoma, X breakpoint 1 0.468441
ZEB1 zinc finger E-box binding homeobox 1 0.465794
RND3 Rho family GTPase 3 0.462394
FUS FUS RNA binding protein 0.455601
SDC1 syndecan 1 0.446558
MYH11 myosin, heavy chain 11, smooth muscle 0.437906
ALPPL2 alkaline phosphatase, placental-like 2 0.430768
ALPP alkaline phosphatase, placental 0.430393
ALPL alkaline phosphatase, liver/bone/kidney 0.430017
CD109 CD109 molecule 0.424765
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.416147
KRT1 keratin 1, type II 0.412405
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.406798
ZBTB17 zinc finger and BTB domain containing 17 0.404557
WRNIP1 Werner helicase interacting protein 1 0.389281
PDPN podoplanin 0.387794
KITLG KIT ligand 0.386679
FOXO4 forkhead box O4 0.384079
PGR progesterone receptor 0.383337
SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 0.37555
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.369258
PARP2 poly (ADP-ribose) polymerase 2 0.362239
ZFPM2 zinc finger protein, FOG family member 2 0.355972
MFGE8 milk fat globule-EGF factor 8 protein 0.346042
WWTR1 WW domain containing transcription regulator 1 0.343473
SST somatostatin 0.339806
HRAS Harvey rat sarcoma viral oncogene homolog 0.336876
VCL vinculin 0.335412
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2) 0.335412
PALLD palladin, cytoskeletal associated protein 0.32774
PRKCD protein kinase C, delta 0.320454
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.316819
TFE3 transcription factor binding to IGHM enhancer 3 0.314278
ACTA1 actin, alpha 1, skeletal muscle 0.314278
MET MET proto-oncogene, receptor tyrosine kinase 0.314278
CLDN5 claudin 5 0.312464
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog 0.309566
PTH parathyroid hormone 0.296571
CLCA4 chloride channel accessory 4 0.286877
DES desmin 0.279724
ESR1 estrogen receptor 1 0.275801
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.267622
KRAS Kirsten rat sarcoma viral oncogene homolog 0.265494
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 0.264785
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.258064
HDAC8 histone deacetylase 8 0.256299
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.255241
CDH5 cadherin 5, type 2 (vascular endothelium) 0.253479
ANK1 ankyrin 1, erythrocytic 0.24996
CLCA2 chloride channel accessory 2 0.247852
VIM vimentin 0.245396
MIR96 microRNA 96 0.244345
ALK anaplastic lymphoma receptor tyrosine kinase 0.232836
MAGEA4 melanoma antigen family A4 0.231795
CXCL6 chemokine (C-X-C motif) ligand 6 0.231102
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.226607
MIR183 microRNA 183 0.226607
AGO2 argonaute RISC catalytic component 2 0.224884
NDRG2 NDRG family member 2 0.223509
MIR100 microRNA 100 0.219057
OSCAR osteoclast associated, immunoglobulin-like receptor 0.215653
JAZF1 JAZF zinc finger 1 0.213621
MAGEC1 melanoma antigen family C1 0.213283
KRT4 keratin 4, type II 0.210589
NF2 neurofibromin 2 (merlin) 0.208914
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.204593
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 0.20229
SDC4 syndecan 4 0.200982
MUC16 mucin 16, cell surface associated 0.196459
MIR10B microRNA 10b 0.196459
SNAI2 snail family zinc finger 2 0.194865
TYR tyrosinase 0.192344
PLAG1 pleiomorphic adenoma gene 1 0.190476
TFEB transcription factor EB 0.183248
S100A10 S100 calcium binding protein A10 0.182375
EBAG9 estrogen receptor binding site associated, antigen, 9 0.176215
ARPP21 cAMP-regulated phosphoprotein, 21kDa 0.171535
CTNS cystinosin, lysosomal cystine transporter 0.170299
KRT15 keratin 15, type I 0.170299
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.169812
MMP2 matrix metallopeptidase 2 0.167682
CFI complement factor I 0.166995
NF1 neurofibromin 1 0.165217
NEFL neurofilament, light polypeptide 0.164571
RHEB Ras homolog enriched in brain 0.162109
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.162109
LCN2 lipocalin 2 0.160574
CLCA1 chloride channel accessory 1 0.159658
B2M beta-2-microglobulin 0.137375
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.135791
MUC4 mucin 4, cell surface associated 0.129823
TTR transthyretin 0.128415
KRT19 keratin 19, type I 0.12818
ETV3 ets variant 3 0.12712
S100A8 S100 calcium binding protein A8 0.126764
HEXA hexosaminidase A (alpha polypeptide) 0.124379
LYZ lysozyme 0.120226
CD48 CD48 molecule 0.115567
SALL4 spalt-like transcription factor 4 0.114077
EGFR epidermal growth factor receptor 0.113127
TG thyroglobulin 0.113095
PROX1 prospero homeobox 1 0.112999
WEE1 WEE1 G2 checkpoint kinase 0.110193
CCND1 cyclin D1 0.107064
SPP1 secreted phosphoprotein 1 0.106871
S1PR1 sphingosine-1-phosphate receptor 1 0.106871
CALCA calcitonin-related polypeptide alpha 0.105816
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 0.100977
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.096035
MBP myelin basic protein 0.095266