medulloblastoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

206 proteins co-occuring with the tissue medulloblastoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
HPDL 4-hydroxyphenylpyruvate dioxygenase-like 1.36086
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) 1.36086
DIS3L DIS3 like exosome 3'-5' exoribonuclease 1.26576
PROM1 prominin 1 1.23762
MXD3 MAX dimerization protein 3 1.21446
ZNF157 zinc finger protein 157 1.1758
TUBG2 tubulin, gamma 2 1.1554
SAMD3 sterile alpha motif domain containing 3 1.10712
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 1.05897
NTRK3 neurotrophic tyrosine kinase, receptor, type 3 1.05765
UBE2J1 ubiquitin-conjugating enzyme E2, J1 1.04752
SHH sonic hedgehog 1.03873
OVCA2 ovarian tumor suppressor candidate 2 1.03522
PTCH1 patched 1 0.99586
TP53 tumor protein p53 0.925907
OTX2 orthodenticle homeobox 2 0.923767
PVRL3 poliovirus receptor-related 3 0.923339
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) 0.919916
IL13RA2 interleukin 13 receptor, alpha 2 0.907535
MSI1 musashi RNA-binding protein 1 0.881627
CREBZF CREB/ATF bZIP transcription factor 0.873594
GLI1 GLI family zinc finger 1 0.854629
HHIP hedgehog interacting protein 0.850845
IGF1R insulin-like growth factor 1 receptor 0.847484
C9ORF78 chromosome 9 open reading frame 78 0.818576
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.803544
ENO2 enolase 2 (gamma, neuronal) 0.803127
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.778155
AURKA aurora kinase A 0.774004
KIF14 kinesin family member 14 0.771514
HIC1 hypermethylated in cancer 1 0.766125
NOTCH2NL notch 2 N-terminal like 0.762397
NOTCH2 notch 2 0.7595
MSI2 musashi RNA-binding protein 2 0.754537
ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8 0.740915
TP73 tumor protein p73 0.726097
NTF3 neurotrophin 3 0.724453
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.717061
LASP1 LIM and SH3 protein 1 0.716241
BRD4 bromodomain containing 4 0.712959
S100A10 S100 calcium binding protein A10 0.678617
SMO smoothened, frizzled class receptor 0.670471
IRS1 insulin receptor substrate 1 0.665182
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.66071
ZFAT zinc finger and AT hook domain containing 0.659085
MAP2K2 mitogen-activated protein kinase kinase 2 0.655024
IL13RA1 interleukin 13 receptor, alpha 1 0.65056
PIKFYVE phosphoinositide kinase, FYVE finger containing 0.644074
LRP1B low density lipoprotein receptor-related protein 1B 0.643669
DAPK3 death-associated protein kinase 3 0.633953
TOP1 topoisomerase (DNA) I 0.622639
KIF4A kinesin family member 4A 0.621428
HNRNPF heterogeneous nuclear ribonucleoprotein F 0.61941
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3 0.619007
SYP synaptophysin 0.610943
IL4R interleukin 4 receptor 0.609332
DMBT1 deleted in malignant brain tumors 1 0.608124
STRADA STE20-related kinase adaptor alpha 0.596862
TUBG1 tubulin, gamma 1 0.588431
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.572818
PCDH10 protocadherin 10 0.557263
MCM4 minichromosome maintenance complex component 4 0.548914
GDI2 GDP dissociation inhibitor 2 0.546533
ING4 inhibitor of growth family, member 4 0.544946
PCGF2 polycomb group ring finger 2 0.525955
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.52556
RAD51 RAD51 recombinase 0.52556
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.524377
PPAP2B phosphatidic acid phosphatase type 2B 0.520435
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.519647
NGF nerve growth factor (beta polypeptide) 0.518072
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.517284
HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 0.512564
S100A6 S100 calcium binding protein A6 0.509027
CCND2 cyclin D2 0.508635
NGFR nerve growth factor receptor 0.500398
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.498048
EIF6 eukaryotic translation initiation factor 6 0.492182
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II) 0.488667
MET MET proto-oncogene, receptor tyrosine kinase 0.477367
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.475034
FAXDC2 fatty acid hydroxylase domain containing 2 0.471151
MAP2 microtubule-associated protein 2 0.456442
FBXO17 F-box protein 17 0.446807
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 0.443731
NMBR neuromedin B receptor 0.442194
ELAVL4 ELAV like neuron-specific RNA binding protein 4 0.441426
CCNG2 cyclin G2 0.440274
PIAS3 protein inhibitor of activated STAT, 3 0.439123
ALDH1B1 aldehyde dehydrogenase 1 family, member B1 0.437972
ANXA5 annexin A5 0.43414
ZFX zinc finger protein, X-linked 0.427636
ESRRG estrogen-related receptor gamma 0.426109
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.419242
S100A2 S100 calcium binding protein A2 0.416957
CDKN2A cyclin-dependent kinase inhibitor 2A 0.414293
ELAVL2 ELAV like neuron-specific RNA binding protein 2 0.412011
MAPK7 mitogen-activated protein kinase 7 0.408592
EWSR1 EWS RNA-binding protein 1 0.402523
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.401765
RASSF1 Ras association (RalGDS/AF-6) domain family member 1 0.401386
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.399492
BLVRB biliverdin reductase B 0.394576
NOTCH1 notch 1 0.385143
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta 0.381755
CDC25C cell division cycle 25C 0.381003
RAD21 RAD21 homolog (S. pombe) 0.374243
EGFR epidermal growth factor receptor 0.372743
HRAS Harvey rat sarcoma viral oncogene homolog 0.36825
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase) 0.36825
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1 0.366381
CCND1 cyclin D1 0.366007
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 0.36526
POU3F4 POU class 3 homeobox 4 0.364513
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 0.364139
LECT1 leukocyte cell derived chemotaxin 1 0.361527
NES nestin 0.359664
CTCFL CCCTC-binding factor (zinc finger protein)-like 0.358919
SDCBP syndecan binding protein (syntenin) 0.358546
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.357802
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 0.355942
PRDX3 peroxiredoxin 3 0.352227
MAPK1 mitogen-activated protein kinase 1 0.350001
MLNR motilin receptor 0.344818
PAX3 paired box 3 0.341495
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.341126
CUX1 cut-like homeobox 1 0.33965
CNTFR ciliary neurotrophic factor receptor 0.339282
HHAT hedgehog acyltransferase 0.337808
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.337072
USP9X ubiquitin specific peptidase 9, X-linked 0.332294
DBT dihydrolipoamide branched chain transacylase E2 0.331927
ERCC4 excision repair cross-complementation group 4 0.322414
BAX BCL2-associated X protein 0.32205
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 0.316224
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 0.314772
RB1 retinoblastoma 1 0.311507
CDK6 cyclin-dependent kinase 6 0.303919
GRIK4 glutamate receptor, ionotropic, kainate 4 0.302478
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.301398
WNK4 WNK lysine deficient protein kinase 4 0.301039
IGFBP7 insulin-like growth factor binding protein 7 0.299242
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 0.297447
OTX1 orthodenticle homeobox 1 0.294939
PTHLH parathyroid hormone-like hormone 0.293508
LXN latexin 0.290652
KDM1A lysine (K)-specific demethylase 1A 0.282837
IRF2 interferon regulatory factor 2 0.276495
HDAC9 histone deacetylase 9 0.275794
GCLM glutamate-cysteine ligase, modifier subunit 0.264696
DNTT DNA nucleotidylexotransferase 0.257572
FASLG Fas ligand (TNF superfamily, member 6) 0.249653
DAP death-associated protein 0.247399
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 0.244545
KLK15 kallikrein-related peptidase 15 0.238706
MCM2 minichromosome maintenance complex component 2 0.238108
WNT7A wingless-type MMTV integration site family, member 7A 0.23781
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.236921
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.234302
WEE1 WEE1 G2 checkpoint kinase 0.234016
GLUL glutamate-ammonia ligase 0.232881
GNRH2 gonadotropin-releasing hormone 2 0.230656
IGF1 insulin-like growth factor 1 (somatomedin C) 0.228497
MMP9 matrix metallopeptidase 9 0.227445
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.226667
SCG5 secretogranin V 0.226411
DAZL deleted in azoospermia-like 0.225144
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 0.223662
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.223662
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.221521
ARNT aryl hydrocarbon receptor nuclear translocator 0.221061
GRM4 glutamate receptor, metabotropic 4 0.218398
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.218186
CFLAR CASP8 and FADD-like apoptosis regulator 0.216528
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.214954
CSNK2A1 casein kinase 2, alpha 1 polypeptide 0.213833
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.213291
SAG S-antigen; retina and pineal gland (arrestin) 0.195612
MMP1 matrix metallopeptidase 1 0.194124
TIMP1 TIMP metallopeptidase inhibitor 1 0.193358
HNF4A hepatocyte nuclear factor 4, alpha 0.193005
B3GAT1 beta-1,3-glucuronyltransferase 1 0.188875
NMB neuromedin B 0.184781
FOXG1 forkhead box G1 0.18385
UGCG UDP-glucose ceramide glucosyltransferase 0.18373
PML promyelocytic leukemia 0.183589
PTMS parathymosin 0.183589
SOX2 SRY (sex determining region Y)-box 2 0.182656
GLI3 GLI family zinc finger 3 0.181894
GRPR gastrin-releasing peptide receptor 0.181232
SARS seryl-tRNA synthetase 0.180931
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.180355
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.177849
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.17774
H3F3B H3 histone, family 3B (H3.3B) 0.177408
H3F3A H3 histone, family 3A 0.177408
ELAVL1 ELAV like RNA binding protein 1 0.175813
ATG5 autophagy related 5 0.175563
ALB albumin 0.173755
RHD Rh blood group, D antigen 0.173683
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.173141
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.171923
LRP5 low density lipoprotein receptor-related protein 5 0.171606
GJA1 gap junction protein, alpha 1, 43kDa 0.170232
AREG amphiregulin 0.168985
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal 0.167998