marked Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

455 genes co-occuring with the biological term marked in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACE angiotensin I converting enzyme
ACP1 acid phosphatase 1, soluble
ADAM17 ADAM metallopeptidase domain 17
ADIPOQ adiponectin, C1Q and collagen domain containing
ADIPOR1 adiponectin receptor 1
ADIPOR2 adiponectin receptor 2
ADRB1 adrenoceptor beta 1
ADRBK1 adrenergic, beta, receptor kinase 1
AES amino-terminal enhancer of split
AFP alpha-fetoprotein
AGER advanced glycosylation end product-specific receptor
AGTR1 angiotensin II receptor, type 1
AHR aryl hydrocarbon receptor
AHSG alpha-2-HS-glycoprotein
AICDA activation-induced cytidine deaminase
AKR1C3 aldo-keto reductase family 1, member C3
ALAD aminolevulinate dehydratase
ALOX5 arachidonate 5-lipoxygenase
AMY1A amylase, alpha 1A (salivary)
ANGPT2 angiopoietin 2
ANKK1 ankyrin repeat and kinase domain containing 1
ANO5 anoctamin 5
ANXA1 annexin A1
ANXA2 annexin A2
AP1S3 adaptor-related protein complex 1, sigma 3 subunit
APC adenomatous polyposis coli
APH1A APH1A gamma secretase subunit
APLN apelin
APOA1 apolipoprotein A-I
APOA2 apolipoprotein A-II
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP2 aquaporin 2 (collecting duct)
AQP3 aquaporin 3 (Gill blood group)
ARRB2 arrestin, beta 2
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
ATR ATR serine/threonine kinase
BAK1 BCL2-antagonist/killer 1
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BDNF brain-derived neurotrophic factor
BEST1 bestrophin 1
BID BH3 interacting domain death agonist
BMI1 BMI1 proto-oncogene, polycomb ring finger
BMP7 bone morphogenetic protein 7
BMX BMX non-receptor tyrosine kinase
BPTF bromodomain PHD finger transcription factor
BRAF B-Raf proto-oncogene, serine/threonine kinase
C1QTNF3 C1q and tumor necrosis factor related protein 3
C2 complement component 2
C3 complement component 3
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit
CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2
CALCA calcitonin-related polypeptide alpha
CALR calreticulin
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASR calcium-sensing receptor
CAV1 caveolin 1, caveolae protein, 22kDa
CCL22 chemokine (C-C motif) ligand 22
CCND1 cyclin D1
CCND2 cyclin D2
CCND3 cyclin D3
CCNE1 cyclin E1
CCR1 chemokine (C-C motif) receptor 1
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD163 CD163 molecule
CD40 CD40 molecule, TNF receptor superfamily member 5
CD40LG CD40 ligand
CD82 CD82 molecule
CDH2 cadherin 2, type 1, N-cadherin (neuronal)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CES1P1 carboxylesterase 1 pseudogene 1
CETP cholesteryl ester transfer protein, plasma
CFH complement factor H
CFHR5 complement factor H-related 5
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CHD8 chromodomain helicase DNA binding protein 8
CHRM1 cholinergic receptor, muscarinic 1
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CIDEC cell death-inducing DFFA-like effector c
CLTA clathrin, light chain A
COL2A1 collagen, type II, alpha 1
COMP cartilage oligomeric matrix protein
CPB2 carboxypeptidase B2 (plasma)
CRH corticotropin releasing hormone
CRP C-reactive protein, pentraxin-related
CRYGD crystallin, gamma D
CS citrate synthase
CSTB cystatin B (stefin B)
CTCF CCCTC-binding factor (zinc finger protein)
CTSB cathepsin B
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL11 chemokine (C-X-C motif) ligand 11
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR3 chemokine (C-X-C motif) receptor 3
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5
DAGLA diacylglycerol lipase, alpha
DAZL deleted in azoospermia-like
DCTN1 dynactin 1
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase)
DHODH dihydroorotate dehydrogenase (quinone)
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6
DPYSL5 dihydropyrimidinase-like 5
DSG2 desmoglein 2
EGF epidermal growth factor
EGFR epidermal growth factor receptor
ELN elastin
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB3 erb-b2 receptor tyrosine kinase 3
ERBB4 erb-b2 receptor tyrosine kinase 4
ESR1 estrogen receptor 1
F10 coagulation factor X
F2RL1 coagulation factor II (thrombin) receptor-like 1
F8 coagulation factor VIII, procoagulant component
FAM65B family with sequence similarity 65, member B
FANCA Fanconi anemia, complementation group A
FASLG Fas ligand (TNF superfamily, member 6)
FBLIM1 filamin binding LIM protein 1
FBN2 fibrillin 2
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23)
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCHO1 FCH domain only 1
FCRL3 Fc receptor-like 3
FERMT1 fermitin family member 1
FERMT2 fermitin family member 2
FGF2 fibroblast growth factor 2 (basic)
FH fumarate hydratase
FKBP1A FK506 binding protein 1A, 12kDa
FLG filaggrin
FMR1 fragile X mental retardation 1
FOXO3 forkhead box O3
FOXP1 forkhead box P1
FOXP2 forkhead box P2
FTO fat mass and obesity associated
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
G6PD glucose-6-phosphate dehydrogenase
GABRA6 gamma-aminobutyric acid (GABA) A receptor, alpha 6
GAD1 glutamate decarboxylase 1 (brain, 67kDa)
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
GALC galactosylceramidase
GAPDH glyceraldehyde-3-phosphate dehydrogenase
GATA2 GATA binding protein 2
GATA3 GATA binding protein 3
GBA glucosidase, beta, acid
GC group-specific component (vitamin D binding protein)
GFAP glial fibrillary acidic protein
GHRL ghrelin/obestatin prepropeptide
GJA1 gap junction protein, alpha 1, 43kDa
GLA galactosidase, alpha
GLI2 GLI family zinc finger 2
GPR55 G protein-coupled receptor 55
GPR87 G protein-coupled receptor 87
GPX1 glutathione peroxidase 1
GRB2 growth factor receptor-bound protein 2
GRN granulin
GSTM1 glutathione S-transferase mu 1
GUCY1A2 guanylate cyclase 1, soluble, alpha 2
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
H2AFX H2A histone family, member X
HBB hemoglobin, beta
HFE hemochromatosis
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HK2 hexokinase 2
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB4 major histocompatibility complex, class II, DR beta 4
HPSE heparanase
HSD11B1 hydroxysteroid (11-beta) dehydrogenase 1
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10
HSPA1A heat shock 70kDa protein 1A
HSPB1 heat shock 27kDa protein 1
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
HYOU1 hypoxia up-regulated 1
IFI30 interferon, gamma-inducible protein 30
IFNA1 interferon, alpha 1
IFNB1 interferon, beta 1, fibroblast
IFNG interferon, gamma
IFNL1 interferon, lambda 1
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IGFBP1 insulin-like growth factor binding protein 1
IGFBP3 insulin-like growth factor binding protein 3
IGFBP5 insulin-like growth factor binding protein 5
IGFBP7 insulin-like growth factor binding protein 7
IL10 interleukin 10
IL12B interleukin 12B
IL13 interleukin 13
IL17A interleukin 17A
IL18 interleukin 18
IL1RN interleukin 1 receptor antagonist
IL23A interleukin 23, alpha subunit p19
IL2RA interleukin 2 receptor, alpha
IL2RB interleukin 2 receptor, beta
IL4 interleukin 4
IL6 interleukin 6
INSR insulin receptor
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
JAK2 Janus kinase 2
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KCNT1 potassium channel, sodium activated subfamily T, member 1
KIF21A kinesin family member 21A
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KITLG KIT ligand
KL klotho
KLF4 Kruppel-like factor 4 (gut)
KLF6 Kruppel-like factor 6
KRT19 keratin 19, type I
LAMA5 laminin, alpha 5
LCT lactase
LDLR low density lipoprotein receptor
LEF1 lymphoid enhancer-binding factor 1
LEP leptin
LEPR leptin receptor
LGALS1 lectin, galactoside-binding, soluble, 1
LGMN legumain
LILRB4 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4
LIPC lipase, hepatic
LIPE lipase, hormone-sensitive
LMNA lamin A/C
LPA lipoprotein, Lp(a)
LPIN1 lipin 1
LRRK2 leucine-rich repeat kinase 2
LTB4R leukotriene B4 receptor
LTBP1 latent transforming growth factor beta binding protein 1
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAD2L2 MAD2 mitotic arrest deficient-like 2 (yeast)
MAGEA1 melanoma antigen family A1
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MAPK14 mitogen-activated protein kinase 14
MAPT microtubule-associated protein tau
MATN3 matrilin 3
MCL1 myeloid cell leukemia 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MET MET proto-oncogene, receptor tyrosine kinase
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MFN1 mitofusin 1
MGST1 microsomal glutathione S-transferase 1
MIER3 mesoderm induction early response 1, family member 3
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIR210 microRNA 210
MIR499A microRNA 499a
MKI67 marker of proliferation Ki-67
MLH1 mutL homolog 1
MMP10 matrix metallopeptidase 10
MMP13 matrix metallopeptidase 13
MMP2 matrix metallopeptidase 2
MMP26 matrix metallopeptidase 26
MMP7 matrix metallopeptidase 7
MMP9 matrix metallopeptidase 9
MPL MPL proto-oncogene, thrombopoietin receptor
MTDH metadherin
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MUC1 mucin 1, cell surface associated
MYBPC3 myosin binding protein C, cardiac
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYH9 myosin, heavy chain 9, non-muscle
MYLIP myosin regulatory light chain interacting protein
NBN nibrin
NEUROG3 neurogenin 3
NF2 neurofibromin 2 (merlin)
NFE2L2 nuclear factor, erythroid 2-like 2
NNMT nicotinamide N-methyltransferase
NOS1 nitric oxide synthase 1 (neuronal)
NOS2 nitric oxide synthase 2, inducible
NPPB natriuretic peptide B
NQO1 NAD(P)H dehydrogenase, quinone 1
NR0B1 nuclear receptor subfamily 0, group B, member 1
NR0B2 nuclear receptor subfamily 0, group B, member 2
NR1I2 nuclear receptor subfamily 1, group I, member 2
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NTRK1 neurotrophic tyrosine kinase, receptor, type 1
OGG1 8-oxoguanine DNA glycosylase
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PARK2 parkin RBR E3 ubiquitin protein ligase
PAX9 paired box 9
PCNA proliferating cell nuclear antigen
PCSK2 proprotein convertase subtilisin/kexin type 2
PCSK9 proprotein convertase subtilisin/kexin type 9
PDCD1 programmed cell death 1
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PECAM1 platelet/endothelial cell adhesion molecule 1
PFN1 profilin 1
PGP phosphoglycolate phosphatase
PGR progesterone receptor
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PIKFYVE phosphoinositide kinase, FYVE finger containing
PLA2G3 phospholipase A2, group III
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLD1 phospholipase D1, phosphatidylcholine-specific
PLD2 phospholipase D2
PLIN1 perilipin 1
PLIN2 perilipin 2
PLXNB1 plexin B1
PML promyelocytic leukemia
PNPLA2 patatin-like phospholipase domain containing 2
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
PON1 paraoxonase 1
PON2 paraoxonase 2
PPAP2B phosphatidic acid phosphatase type 2B
PPARG peroxisome proliferator-activated receptor gamma
PPIA peptidylprolyl isomerase A (cyclophilin A)
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B
PRDX6 peroxiredoxin 6
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PRNP prion protein
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROS1 protein S (alpha)
PRPF8 pre-mRNA processing factor 8
PRPH2 peripherin 2 (retinal degeneration, slow)
PRSS1 protease, serine, 1 (trypsin 1)
PSEN1 presenilin 1
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTMA prothymosin, alpha
PYCARD PYD and CARD domain containing
RAB14 RAB14, member RAS oncogene family
RAB30 RAB30, member RAS oncogene family
RAB43 RAB43, member RAS oncogene family
RALBP1 ralA binding protein 1
RB1 retinoblastoma 1
RBP4 retinol binding protein 4, plasma
REG1A regenerating islet-derived 1 alpha
REG1B regenerating islet-derived 1 beta
REG3A regenerating islet-derived 3 alpha
REG4 regenerating islet-derived family, member 4
RETN resistin
RHOA ras homolog family member A
RMRP RNA component of mitochondrial RNA processing endoribonuclease
RPL11 ribosomal protein L11
RPS19 ribosomal protein S19
RPS24 ribosomal protein S24
RUNX1 runt-related transcription factor 1
RUVBL2 RuvB-like AAA ATPase 2
RYBP RING1 and YY1 binding protein
RYR2 ryanodine receptor 2 (cardiac)
SCAMP1 secretory carrier membrane protein 1
SCG2 secretogranin II
SCN4A sodium channel, voltage gated, type IV alpha subunit
SCN5A sodium channel, voltage gated, type V alpha subunit
SCTR secretin receptor
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
SEMA3F sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1
SF3B1 splicing factor 3b, subunit 1, 155kDa
SHBG sex hormone-binding globulin
SHOX2 short stature homeobox 2
SIRT1 sirtuin 1
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter)
SLC20A1 solute carrier family 20 (phosphate transporter), member 1
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SMAD7 SMAD family member 7
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNX12 sorting nexin 12
SOCS3 suppressor of cytokine signaling 3
SOD1 superoxide dismutase 1, soluble
SOST sclerostin
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SPHK1 sphingosine kinase 1
SPINK1 serine peptidase inhibitor, Kazal type 1
SPP1 secreted phosphoprotein 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STK11 serine/threonine kinase 11
SV2A synaptic vesicle glycoprotein 2A
SV2B synaptic vesicle glycoprotein 2B
TBX5 T-box 5
TCEAL1 transcription elongation factor A (SII)-like 1
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TDP1 tyrosyl-DNA phosphodiesterase 1
TERT telomerase reverse transcriptase
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TFPI2 tissue factor pathway inhibitor 2
TFRC transferrin receptor
TGFB1 transforming growth factor, beta 1
TGFBR1 transforming growth factor, beta receptor 1
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TGM2 transglutaminase 2
THAP1 THAP domain containing, apoptosis associated protein 1
TIMM10 translocase of inner mitochondrial membrane 10 homolog (yeast)
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast)
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TJP1 tight junction protein 1
TLR2 toll-like receptor 2
TLR3 toll-like receptor 3
TLR9 toll-like receptor 9
TNF tumor necrosis factor
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TNFRSF4 tumor necrosis factor receptor superfamily, member 4
TNXB tenascin XB
TOM1 target of myb1 (chicken)
TOM1L1 target of myb1 (chicken)-like 1
TP53 tumor protein p53
TPM2 tropomyosin 2 (beta)
TRPM2 transient receptor potential cation channel, subfamily M, member 2
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TRPV4 transient receptor potential cation channel, subfamily V, member 4
TSPYL2 TSPY-like 2
TTN titin
TWIST1 twist family bHLH transcription factor 1
TYK2 tyrosine kinase 2
UGCG UDP-glucose ceramide glucosyltransferase
UMOD uromodulin
UNG uracil-DNA glycosylase
VCAM1 vascular cell adhesion molecule 1
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VIP vasoactive intestinal peptide
VLDLR very low density lipoprotein receptor
VWF von Willebrand factor
WISP1 WNT1 inducible signaling pathway protein 1
WNT10A wingless-type MMTV integration site family, member 10A
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
YAP1 Yes-associated protein 1
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial
ZFP36L1 ZFP36 ring finger protein-like 1
ZFYVE16 zinc finger, FYVE domain containing 16