lysp100-associated nuclear domain Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies. (Gene Ontology, GO_0016606)
Similar Terms
Downloads & Tools

Genes

91 proteins co-occuring with the lysp100-associated nuclear domain cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CTSS cathepsin S 2.13477
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 1.49436
CTSK cathepsin K 1.40634
CTSL cathepsin L 1.37354
CTSB cathepsin B 1.30389
CTSH cathepsin H 1.28196
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 1.15876
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 1.13165
MAG myelin associated glycoprotein 1.06296
CSTA cystatin A (stefin A) 1.05337
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 1.03179
PRX periaxin 1.01883
CST3 cystatin C 0.97323
SP140 SP140 nuclear body protein 0.901353
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 0.880094
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 0.787817
CSTB cystatin B (stefin B) 0.78004
CDSN corneodesmosin 0.770451
ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 0.762252
PATE1 prostate and testis expressed 1 0.728389
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 0.716346
TPGS2 tubulin polyglutamylase complex subunit 2 0.668559
CABP1 calcium binding protein 1 0.662503
TAC4 tachykinin 4 (hemokinin) 0.623504
CABP5 calcium binding protein 5 0.622229
CST2 cystatin SA 0.61883
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.614589
CHN2 chimerin 2 0.601909
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 0.583012
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.539472
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 0.537416
ADAM12 ADAM metallopeptidase domain 12 0.510418
RPL31 ribosomal protein L31 0.50635
PPT2 palmitoyl-protein thioesterase 2 0.485693
TFEC transcription factor EC 0.485693
MOG myelin oligodendrocyte glycoprotein 0.474018
ARID3A AT rich interactive domain 3A (BRIGHT-like) 0.462398
CTSF cathepsin F 0.446862
CD109 CD109 molecule 0.446069
AAAS achalasia, adrenocortical insufficiency, alacrimia 0.431435
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 0.427497
ADAM28 ADAM metallopeptidase domain 28 0.420036
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 0.409479
MARK4 MAP/microtubule affinity-regulating kinase 4 0.397035
CD48 CD48 molecule 0.392001
ADAM8 ADAM metallopeptidase domain 8 0.391615
BLMH bleomycin hydrolase 0.377354
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 0.374666
MCL1 myeloid cell leukemia 1 0.368536
CST4 cystatin S 0.359371
CTSV cathepsin V 0.356705
MMP19 matrix metallopeptidase 19 0.352142
STRBP spermatid perinuclear RNA binding protein 0.333225
ODF1 outer dense fiber of sperm tails 1 0.332472
MMP20 matrix metallopeptidase 20 0.330966
SIGLEC10 sialic acid binding Ig-like lectin 10 0.318953
IL4I1 interleukin 4 induced 1 0.308494
SORBS1 sorbin and SH3 domain containing 1 0.308122
ADAM17 ADAM metallopeptidase domain 17 0.29586
RND1 Rho family GTPase 1 0.293637
AMBN ameloblastin (enamel matrix protein) 0.290308
CTSZ cathepsin Z 0.284401
DRD4 dopamine receptor D4 0.281821
SIX3 SIX homeobox 3 0.279245
TPP2 tripeptidyl peptidase II 0.278877
SALL4 spalt-like transcription factor 4 0.276304
SHB Src homology 2 domain containing adaptor protein B 0.275936
ENAM enamelin 0.266774
KLK4 kallikrein-related peptidase 4 0.263485
RER1 retention in endoplasmic reticulum sorting receptor 1 0.256561
SP100 SP100 nuclear antigen 0.24424
UNC93B1 unc-93 homolog B1 (C. elegans) 0.241356
NT5C 5', 3'-nucleotidase, cytosolic 0.235249
CTSD cathepsin D 0.224913
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 0.22279
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 0.222436
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.219265
RFXANK regulatory factor X-associated ankyrin-containing protein 0.21716
CTSC cathepsin C 0.214714
SLPI secretory leukocyte peptidase inhibitor 0.210894
EGR2 early growth response 2 0.209513
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6 0.206423
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal 0.194045
TMBIM4 transmembrane BAX inhibitor motif containing 4 0.191135
DAND5 DAN domain family member 5, BMP antagonist 0.180634
NDRG1 N-myc downstream regulated 1 0.174087
IFI30 interferon, gamma-inducible protein 30 0.172201
RARA retinoic acid receptor, alpha 0.16935
GATA6 GATA binding protein 6 0.167856
NBPF10 neuroblastoma breakpoint family, member 10 0.161275
BAIAP2 BAI1-associated protein 2 0.161068