lysosomal lumen Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The volume enclosed within the lysosomal membrane. (Gene Ontology, GO_0043202)
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Genes

39 proteins co-occuring with the lysosomal lumen cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NDFIP1 Nedd4 family interacting protein 1 0.897183
NEU4 sialidase 4 0.843318
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.757707
CTSS cathepsin S 0.746381
TPCN2 two pore segment channel 2 0.706156
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.668559
NPC2 Niemann-Pick disease, type C2 0.644001
ATP13A2 ATPase type 13A2 0.641001
RER1 retention in endoplasmic reticulum sorting receptor 1 0.615013
HSPA8 heat shock 70kDa protein 8 0.612471
PIKFYVE phosphoinositide kinase, FYVE finger containing 0.609509
CTSA cathepsin A 0.595173
TSG101 tumor susceptibility 101 0.589714
NEU2 sialidase 2 (cytosolic sialidase) 0.558871
NEU3 sialidase 3 (membrane sialidase) 0.525522
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.503912
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.502693
NPC1 Niemann-Pick disease, type C1 0.499853
TPP1 tripeptidyl peptidase I 0.480855
FBN2 fibrillin 2 0.450836
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.446862
MCOLN1 mucolipin 1 0.414164
NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha 0.404026
FCGRT Fc fragment of IgG, receptor, transporter, alpha 0.400139
NCSTN nicastrin 0.351002
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.347587
RHEB Ras homolog enriched in brain 0.330589
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.319328
LAMP1 lysosomal-associated membrane protein 1 0.305143
PARK2 parkin RBR E3 ubiquitin protein ligase 0.282558
DNAH8 dynein, axonemal, heavy chain 8 0.249664
NOTCH1 notch 1 0.231315
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal 0.219265
LRP2 low density lipoprotein receptor-related protein 2 0.207794
CDSN corneodesmosin 0.187646
LAMP2 lysosomal-associated membrane protein 2 0.158692
M6PR mannose-6-phosphate receptor (cation dependent) 0.158129
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.157943
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.156863