lung small cell carcinoma Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A lung carcinoma that has_material_basis_in primitive-appearing cells that are smaller than normal cells. (Human Disease Ontology, DOID_5409)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:5409
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Genes

58 genes associated with the disease lung small cell carcinoma in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
JAZF1 JAZF zinc finger 1 1.2326
STXBP5 syntaxin binding protein 5 (tomosyn) 1.17795
ARMC4 armadillo repeat containing 4 1.03466
BCR breakpoint cluster region 0.975051
PUS10 pseudouridylate synthase 10 0.961512
CACHD1 cache domain containing 1 0.942098
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.931899
MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 0.900854
USP34 ubiquitin specific peptidase 34 0.89953
CSMD1 CUB and Sushi multiple domains 1 0.890183
TRPM1 transient receptor potential cation channel, subfamily M, member 1 0.885252
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.86494
KDM1A lysine (K)-specific demethylase 1A 0.836459
ATP2A3 ATPase, Ca++ transporting, ubiquitous 0.829868
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1 0.823542
PPEF1 protein phosphatase, EF-hand calcium binding domain 1 0.822323
TRPC7 transient receptor potential cation channel, subfamily C, member 7 0.819536
EFCAB8 EF-hand calcium binding domain 8 0.810532
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.798096
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 0.79774
CREB3L2 cAMP responsive element binding protein 3-like 2 0.79563
DMD dystrophin 0.793221
AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) 0.776314
C6ORF7 chromosome 6 open reading frame 7 0.772631
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 0.767289
TMEM255B transmembrane protein 255B 0.757405
SGCZ sarcoglycan, zeta 0.749605
DNAH11 dynein, axonemal, heavy chain 11 0.734059
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 0.733341
HELQ helicase, POLQ-like 0.728446
KLF12 Kruppel-like factor 12 0.725078
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.72117
LOC440600 uncharacterized LOC440600 0.718017
NPFFR2 neuropeptide FF receptor 2 0.685395
PPME1 protein phosphatase methylesterase 1 0.684644
UBOX5 U-box domain containing 5 0.681837
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 0.678965
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 0.676448
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.664902
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.662072
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.654978
PTCHD3 patched domain containing 3 0.654978
LAMA4 laminin, alpha 4 0.652472
XPO1 exportin 1 0.644765
MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 0.639985
CDH10 cadherin 10, type 2 (T2-cadherin) 0.637483
TACC2 transforming, acidic coiled-coil containing protein 2 0.625315
TBC1D22A TBC1 domain family, member 22A 0.622682
NEBL nebulette 0.618434
GSG1L GSG1-like 0.615118
TSPAN9 tetraspanin 9 0.604465
LHFP lipoma HMGIC fusion partner 0.600463
MAPK4 mitogen-activated protein kinase 4 0.597957
C3 complement component 3 0.594297
F2RL2 coagulation factor II (thrombin) receptor-like 2 0.587316
CARD8 caspase recruitment domain family, member 8 0.585389
LGMN legumain 0.575922
C2ORF74 chromosome 2 open reading frame 74 0.574385