lateral element Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A proteinaceous core found between sister chromatids during meiotic prophase. (Gene Ontology, GO_0000800)
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Genes

70 proteins co-occuring with the lateral element cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SYCP3 synaptonemal complex protein 3 2.37553
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 2.29553
STAG3 stromal antigen 3 1.78979
SYCP2 synaptonemal complex protein 2 1.75852
SYCP1 synaptonemal complex protein 1 1.74892
SMC1B structural maintenance of chromosomes 1B 1.66962
SMC3 structural maintenance of chromosomes 3 1.66357
RAD51 RAD51 recombinase 1.37078
SYCE2 synaptonemal complex central element protein 2 1.2793
SPO11 SPO11 meiotic protein covalently bound to DSB 1.25811
RAD21 RAD21 homolog (S. pombe) 1.19777
MLH1 mutL homolog 1 1.08425
SYCE1 synaptonemal complex central element protein 1 1.03879
HORMAD1 HORMA domain containing 1 0.956395
DMC1 DNA meiotic recombinase 1 0.914376
MSH4 mutS homolog 4 0.89348
TEX11 testis expressed 11 0.873186
ATR ATR serine/threonine kinase 0.824959
TSGA10 testis specific, 10 0.817158
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 0.815781
SMC1A structural maintenance of chromosomes 1A 0.763617
RAD50 RAD50 homolog (S. cerevisiae) 0.745477
TEX12 testis expressed 12 0.709251
PDCL2 phosducin-like 2 0.694709
H2AFX H2A histone family, member X 0.688576
ATM ATM serine/threonine kinase 0.677673
MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae) 0.668992
BEGAIN brain-enriched guanylate kinase-associated 0.668559
P3H4 prolyl 3-hydroxylase family member 4 (non-enzymatic) 0.667693
DIDO1 death inducer-obliterator 1 0.656464
RAI1 retinoic acid induced 1 0.655602
TRIP13 thyroid hormone receptor interactor 13 0.632878
MAU2 MAU2 sister chromatid cohesion factor 0.630318
OPLAH 5-oxoprolinase (ATP-hydrolysing) 0.620954
BRCA1 breast cancer 1, early onset 0.617982
WDR61 WD repeat domain 61 0.582594
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.577581
SETX senataxin 0.576747
UBE2B ubiquitin-conjugating enzyme E2B 0.504318
PAX9 paired box 9 0.496205
MLH3 mutL homolog 3 0.482064
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.436565
STRA8 stimulated by retinoic acid 8 0.428284
TSPAN10 tetraspanin 10 0.42396
PDS5B PDS5 cohesin associated factor B 0.378122
SMC2 structural maintenance of chromosomes 2 0.356705
DAZL deleted in azoospermia-like 0.355563
SCIN scinderin 0.347967
MSH3 mutS homolog 3 0.325327
STXBP3 syntaxin binding protein 3 0.312597
GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1 0.278877
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 0.274101
CTBP2 C-terminal binding protein 2 0.270434
BRCA2 breast cancer 2, early onset 0.268237
SUN1 Sad1 and UNC84 domain containing 1 0.248216
TMEM11 transmembrane protein 11 0.246407
PTGDR prostaglandin D2 receptor (DP) 0.245685
CALB1 calbindin 1, 28kDa 0.242437
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 0.238119
NIPBL Nipped-B homolog (Drosophila) 0.236683
PANX1 pannexin 1 0.225267
DLG3 discs, large homolog 3 (Drosophila) 0.219265
MSX1 msh homeobox 1 0.215063
CFD complement factor D (adipsin) 0.196339
SKAP2 src kinase associated phosphoprotein 2 0.190175
MSX2 msh homeobox 2 0.189222
PLK2 polo-like kinase 2 0.182122
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.158882
CDC7 cell division cycle 7 0.158692
TPO thyroid peroxidase 0.157578