large ribosomal subunit Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). (Gene Ontology, GO_0015934)
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Genes

234 proteins co-occuring with the large ribosomal subunit cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NMD3 NMD3 ribosome export adaptor 1.67811
RPL24 ribosomal protein L24 1.56275
EIF6 eukaryotic translation initiation factor 6 1.50453
LAS1L LAS1-like (S. cerevisiae) 1.48588
RPL7 ribosomal protein L7 1.48305
EEF2 eukaryotic translation elongation factor 2 1.36802
RPL39 ribosomal protein L39 1.36582
RPL11 ribosomal protein L11 1.31519
NSUN4 NOP2/Sun domain family, member 4 1.29692
SBDS Shwachman-Bodian-Diamond syndrome 1.28943
RPL4 ribosomal protein L4 1.28943
RPL10 ribosomal protein L10 1.28516
MRPL13 mitochondrial ribosomal protein L13 1.26181
MDN1 MDN1, midasin homolog (yeast) 1.25759
TEX10 testis expressed 10 1.234
RPLP0 ribosomal protein, large, P0 1.21325
EIF5 eukaryotic translation initiation factor 5 1.18492
WDR18 WD repeat domain 18 1.18081
RPL29 ribosomal protein L29 1.1644
EIF5B eukaryotic translation initiation factor 5B 1.1516
RPL5 ribosomal protein L5 1.13676
RSL24D1 ribosomal L24 domain containing 1 1.12552
RPL18A ribosomal protein L18a 1.09493
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae) 1.07258
MALSU1 mitochondrial assembly of ribosomal large subunit 1 1.03779
BOP1 block of proliferation 1 1.02829
EBNA1BP2 EBNA1 binding protein 2 1.01635
RPL39L ribosomal protein L39-like 1.01139
RPL36A ribosomal protein L36a 0.991225
RPL9 ribosomal protein L9 0.990736
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.98927
RPL10A ribosomal protein L10a 0.988294
RPL13A ribosomal protein L13a 0.984393
RPL3 ribosomal protein L3 0.980016
CHAF1B chromatin assembly factor 1, subunit B (p60) 0.935488
ZNF185 zinc finger protein 185 (LIM domain) 0.934544
RPL10AP3 ribosomal protein L10a pseudogene 3 0.928422
RPL22 ribosomal protein L22 0.913909
RPL31 ribosomal protein L31 0.909716
RPL23 ribosomal protein L23 0.909251
RPL35A ribosomal protein L35a 0.883321
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 0.876409
MRPL48 mitochondrial ribosomal protein L48 0.845155
FXR1 fragile X mental retardation, autosomal homolog 1 0.843318
RPL27 ribosomal protein L27 0.840564
RPL14 ribosomal protein L14 0.826336
FXR2 fragile X mental retardation, autosomal homolog 2 0.823123
MRPS2 mitochondrial ribosomal protein S2 0.817158
RPL7A ribosomal protein L7a 0.814405
SPATS2L spermatogenesis associated, serine-rich 2-like 0.810735
RNMT RNA (guanine-7-) methyltransferase 0.800645
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.790106
ORAOV1 oral cancer overexpressed 1 0.790106
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) 0.78004
NXT1 nuclear transport factor 2-like export factor 1 0.764072
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2 0.762707
EIF4H eukaryotic translation initiation factor 4H 0.759069
DUOXA2 dual oxidase maturation factor 2 0.745025
EIF4B eukaryotic translation initiation factor 4B 0.744122
XPO1 exportin 1 0.740965
RPL15 ribosomal protein L15 0.739163
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.736913
FAM20C family with sequence similarity 20, member C 0.730628
PELP1 proline, glutamate and leucine rich protein 1 0.721688
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.715458
RIOK3 RIO kinase 3 0.712795
PES1 pescadillo ribosomal biogenesis factor 1 0.70439
EIF3G eukaryotic translation initiation factor 3, subunit G 0.70439
LSG1 large 60S subunit nuclear export GTPase 1 0.702185
RPL27A ribosomal protein L27a 0.698663
MRPS11 mitochondrial ribosomal protein S11 0.68639
NXF1 nuclear RNA export factor 1 0.678978
SLC7A10 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 0.675065
MTG1 mitochondrial ribosome-associated GTPase 1 0.671159
RNMTL1 RNA methyltransferase like 1 0.668992
ETF1 eukaryotic translation termination factor 1 0.666827
EIF3H eukaryotic translation initiation factor 3, subunit H 0.656033
RPS24 ribosomal protein S24 0.654741
GTPBP4 GTP binding protein 4 0.647433
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.640573
SECISBP2 SECIS binding protein 2 0.639289
SURF2 surfeit 2 0.633732
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) 0.631598
EIF5A eukaryotic translation initiation factor 5A 0.627335
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.626057
RPL35 ribosomal protein L35 0.625632
RPL38 ribosomal protein L38 0.62393
MRPS16 mitochondrial ribosomal protein S16 0.621379
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.620529
MTERF1 mitochondrial transcription termination factor 1 0.617982
RPL19 ribosomal protein L19 0.608241
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.575495
DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 0.573828
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.573411
RPS13 ribosomal protein S13 0.570496
RPL37A ribosomal protein L37a 0.569664
RPS19 ribosomal protein S19 0.564262
PTGDR prostaglandin D2 receptor (DP) 0.562187
RGMB repulsive guidance molecule family member b 0.557214
RPS18P12 ribosomal protein S18 pseudogene 12 0.554732
TST thiosulfate sulfurtransferase (rhodanese) 0.54771
RPS18 ribosomal protein S18 0.54606
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 0.544823
RPL12 ribosomal protein L12 0.543587
SPATA21 spermatogenesis associated 21 0.541117
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.53906
RPS17 ribosomal protein S17 0.53454
DEFA1B defensin, alpha 1B 0.532078
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) 0.528798
WDR12 WD repeat domain 12 0.52716
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.524704
XCL1 chemokine (C motif) ligand 1 0.523885
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast) 0.523067
RPL36AL ribosomal protein L36a-like 0.517756
RCL1 RNA terminal phosphate cyclase-like 1 0.51694
DEFA1 defensin, alpha 1 0.516532
UNC45A unc-45 homolog A (C. elegans) 0.513677
PXK PX domain containing serine/threonine kinase 0.509197
GFRA2 GDNF family receptor alpha 2 0.50879
RPS5 ribosomal protein S5 0.503099
RPL13 ribosomal protein L13 0.498636
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 0.498231
IGHMBP2 immunoglobulin mu binding protein 2 0.49418
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 0.489731
RPL23A ribosomal protein L23a 0.489327
NOL9 nucleolar protein 9 0.4865
NDC1 NDC1 transmembrane nucleoporin 0.481258
MRPS22 mitochondrial ribosomal protein S22 0.47844
LGTN ligatin 0.473215
RNASEH2A ribonuclease H2, subunit A 0.460401
FMR1 fragile X mental retardation 1 0.454816
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.445672
EIF4E eukaryotic translation initiation factor 4E 0.437356
RPL8 ribosomal protein L8 0.437356
RPL7P32 ribosomal protein L7 pseudogene 32 0.434591
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.428284
C11ORF58 chromosome 11 open reading frame 58 0.427891
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 0.424353
MGAM maltase-glucoamylase 0.415337
LTV1 LTV1 ribosome biogenesis factor 0.414946
RPL36 ribosomal protein L36 0.408309
RPL37 ribosomal protein L37 0.405971
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.405582
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 0.404026
RARS2 arginyl-tRNA synthetase 2, mitochondrial 0.392001
EIF1AX eukaryotic translation initiation factor 1A, X-linked 0.390068
EPRS glutamyl-prolyl-tRNA synthetase 0.388523
RPL32 ribosomal protein L32 0.386593
HRSP12 heat-responsive protein 12 0.385051
OXA1L oxidase (cytochrome c) assembly 1-like 0.38428
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.37966
RPS6 ribosomal protein S6 0.37697
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.373516
MRPL16 mitochondrial ribosomal protein L16 0.372366
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.369301
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 0.365095
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.360515
RIOK2 RIO kinase 2 0.359752
NOP2 NOP2 nucleolar protein 0.357467
CBS cystathionine-beta-synthase 0.356705
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.355944
MRPL12 mitochondrial ribosomal protein L12 0.354042
RPS20 ribosomal protein S20 0.347587
YME1L1 YME1-like 1 ATPase 0.34664
CLCN6 chloride channel, voltage-sensitive 6 0.345314
NAT10 N-acetyltransferase 10 (GCN5-related) 0.338128
PRMT3 protein arginine methyltransferase 3 0.334733
RPL34 ribosomal protein L34 0.332095
EME1 essential meiotic structure-specific endonuclease 1 0.332095
RPL6 ribosomal protein L6 0.318205
NUTF2 nuclear transport factor 2 0.314839
KRIT1 KRIT1, ankyrin repeat containing 0.312224
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.308867
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) 0.308494
TNFRSF25 tumor necrosis factor receptor superfamily, member 25 0.307377
RPL26 ribosomal protein L26 0.306632
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 0.301054
UBA2 ubiquitin-like modifier activating enzyme 2 0.293637
CSNK2B casein kinase 2, beta polypeptide 0.290678
RPL21 ribosomal protein L21 0.289938
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 0.281453
VIMP VCP-interacting membrane selenoprotein 0.279245
RPN2 ribophorin II 0.271533
SLC27A4 solute carrier family 27 (fatty acid transporter), member 4 0.269335
EXOSC4 exosome component 4 0.267871
TRIM25 tripartite motif containing 25 0.260202
IFNG interferon, gamma 0.251839
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 0.250751
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.246046
TP53 tumor protein p53 0.245685
LSR lipolysis stimulated lipoprotein receptor 0.243879
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.238837
PABPC1 poly(A) binding protein, cytoplasmic 1 0.224913
AQP9 aquaporin 9 0.218914
PCCA propionyl CoA carboxylase, alpha polypeptide 0.21716
ACTB actin, beta 0.21681
SLC38A2 solute carrier family 38, member 2 0.204039
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 0.199325
RHOA ras homolog family member A 0.198658
CSN1S1 casein alpha s1 0.196999
ACTG1 actin gamma 1 0.194045
RPS15 ribosomal protein S15 0.186708
FBLL1 fibrillarin-like 1 0.185469
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.183935
UNC93B1 unc-93 homolog B1 (C. elegans) 0.182723
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 0.179459
DNAH8 dynein, axonemal, heavy chain 8 0.17687
ARHGAP21 Rho GTPase activating protein 21 0.175745
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.171673
PI3 peptidase inhibitor 3, skin-derived 0.171149
PHEX phosphate regulating endopeptidase homolog, X-linked 0.170888
NT5C2 5'-nucleotidase, cytosolic II 0.166884
NR3C2 nuclear receptor subfamily 3, group C, member 2 0.165231
YARS tyrosyl-tRNA synthetase 0.164315
SCAI suppressor of cancer cell invasion 0.16342
SRPR signal recognition particle receptor (docking protein) 0.161693
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.161068
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.137981
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.11541
EFS embryonal Fyn-associated substrate 0.114958
RPS12 ribosomal protein S12 0.113036
RPS2 ribosomal protein S2 0.112655
NLE1 notchless homolog 1 (Drosophila) 0.11233
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.111736
HMBS hydroxymethylbilane synthase 0.110918
CP ceruloplasmin (ferroxidase) 0.110883
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 0.110603
HNMT histamine N-methyltransferase 0.110105
FBN2 fibrillin 2 0.108626
AGO1 argonaute RISC catalytic component 1 0.107812
LOX lysyl oxidase 0.107377
C6ORF25 chromosome 6 open reading frame 25 0.105648
CD3D CD3d molecule, delta (CD3-TCR complex) 0.105606
SUMO1 small ubiquitin-like modifier 1 0.105521