isthmic basal plate Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
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Genes

172 genes with high or low expression in isthmic basal plate relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 1.93506
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 1.79927
TPH2 tryptophan hydroxylase 2 1.73696
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 1.67868
FAM169A family with sequence similarity 169, member A 1.61762
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 1.61306
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2 1.52637
TMC1 transmembrane channel-like 1 1.52477
CDC6 cell division cycle 6 1.47913
SEC24A SEC24 family member A 1.47361
MANSC4 MANSC domain containing 4 1.47121
AWAT2 acyl-CoA wax alcohol acyltransferase 2 1.46181
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 1.45659
EN1 engrailed homeobox 1 1.44824
GCH1 GTP cyclohydrolase 1 1.43058
EVA1C eva-1 homolog C (C. elegans) 1.41863
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 1.41841
FGD5 FYVE, RhoGEF and PH domain containing 5 1.39505
MCEMP1 mast cell-expressed membrane protein 1 1.38486
KLF11 Kruppel-like factor 11 1.36182
ALDOC aldolase C, fructose-bisphosphate 1.34946
CCL28 chemokine (C-C motif) ligand 28 1.34196
EXD1 exonuclease 3'-5' domain containing 1 1.31626
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 1.31594
PDILT protein disulfide isomerase-like, testis expressed 1.31137
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 1.30705
SPX spexin hormone 1.2691
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 1.26316
SLC10A4 solute carrier family 10, member 4 1.26302
TEDDM1 transmembrane epididymal protein 1 1.25628
FEN1 flap structure-specific endonuclease 1 1.2491
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 1.21714
RCAN3 RCAN family member 3 1.21429
GLTPD2 glycolipid transfer protein domain containing 2 1.21374
RPL12 ribosomal protein L12 1.20293
PAX5 paired box 5 1.18178
FAM184A family with sequence similarity 184, member A 1.17603
GJD3 gap junction protein, delta 3, 31.9kDa 1.16898
ARMCX6 armadillo repeat containing, X-linked 6 1.1677
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 1.16099
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled 1.15787
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 1.14612
FOXA1 forkhead box A1 1.13519
MAOB monoamine oxidase B 1.13091
H2BFM H2B histone family, member M 1.12926
UMOD uromodulin 1.12898
CNTN1 contactin 1 1.12051
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2 1.11065
MBD5 methyl-CpG binding domain protein 5 1.10552
LIX1 Lix1 homolog (chicken) 1.10292
HK1 hexokinase 1 1.08336
GLYCTK glycerate kinase 1.07793
ESR2 estrogen receptor 2 (ER beta) 1.06727
MVD mevalonate (diphospho) decarboxylase 1.06353
CLCN5 chloride channel, voltage-sensitive 5 1.06303
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 1.06082
CRYBA2 crystallin, beta A2 1.04813
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) 1.0475
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) 1.04553
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 1.04057
RNF152 ring finger protein 152 1.03644
GUCY2C guanylate cyclase 2C 1.03425
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 1.02436
PCDHAC1 protocadherin alpha subfamily C, 1 1.0239
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 1.02377
ERAP1 endoplasmic reticulum aminopeptidase 1 1.02266
UGDH UDP-glucose 6-dehydrogenase 1.02078
KRT4 keratin 4, type II 1.01678
CAMP cathelicidin antimicrobial peptide 1.01443
SLC46A2 solute carrier family 46, member 2 1.00217

low expression

Symbol Name Standardized Value
GLIPR2 GLI pathogenesis-related 2 -2.83476
HSCB HscB mitochondrial iron-sulfur cluster co-chaperone -2.40227
GPRC5A G protein-coupled receptor, class C, group 5, member A -2.24314
TEX28 testis expressed 28 -2.214
FAM109B family with sequence similarity 109, member B -2.17711
COX7A1 cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) -2.16901
GCFC2 GC-rich sequence DNA-binding factor 2 -2.15119
CBR4 carbonyl reductase 4 -2.07437
IFI44L interferon-induced protein 44-like -2.06253
GNA14 guanine nucleotide binding protein (G protein), alpha 14 -2.05966
CUZD1 CUB and zona pellucida-like domains 1 -1.9006
ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 -1.89441
HOXB3 homeobox B3 -1.85437
OXNAD1 oxidoreductase NAD-binding domain containing 1 -1.8208
CLEC4A C-type lectin domain family 4, member A -1.81028
KCNV1 potassium channel, voltage gated modifier subfamily V, member 1 -1.80648
C6ORF15 chromosome 6 open reading frame 15 -1.8023
IGFBP1 insulin-like growth factor binding protein 1 -1.71364
LY96 lymphocyte antigen 96 -1.71145
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase -1.67696
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 -1.67478
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7 -1.65653
TSGA13 testis specific, 13 -1.63785
SYCP1 synaptonemal complex protein 1 -1.6295
ANTXRL anthrax toxin receptor-like -1.55115
GKN1 gastrokine 1 -1.52017
ADAMDEC1 ADAM-like, decysin 1 -1.48614
ALPI alkaline phosphatase, intestinal -1.47984
SKA1 spindle and kinetochore associated complex subunit 1 -1.43435
C9ORF173 chromosome 9 open reading frame 173 -1.40661
GK glycerol kinase -1.40585
CYSLTR2 cysteinyl leukotriene receptor 2 -1.3969
LYG2 lysozyme G-like 2 -1.38123
LBR lamin B receptor -1.37837
IL18RAP interleukin 18 receptor accessory protein -1.36735
SLC46A1 solute carrier family 46 (folate transporter), member 1 -1.36715
INHBE inhibin, beta E -1.3511
SSMEM1 serine-rich single-pass membrane protein 1 -1.34604
SLC16A8 solute carrier family 16 (monocarboxylate transporter), member 8 -1.34306
PLCB2 phospholipase C, beta 2 -1.32968
HUS1B HUS1 checkpoint homolog b (S. pombe) -1.3227
GPR35 G protein-coupled receptor 35 -1.31054
AXIN2 axin 2 -1.2844
CASP16 caspase 16, apoptosis-related cysteine peptidase (putative) -1.28115
TMEM236 transmembrane protein 236 -1.28086
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) -1.26579
ARL5B ADP-ribosylation factor-like 5B -1.25425
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) -1.25361
FOXR1 forkhead box R1 -1.24798
QRFP pyroglutamylated RFamide peptide -1.2455
VANGL1 VANGL planar cell polarity protein 1 -1.22953
IL5RA interleukin 5 receptor, alpha -1.22248
FAM162B family with sequence similarity 162, member B -1.22069
FAM26D family with sequence similarity 26, member D -1.21992
OR4K1 olfactory receptor, family 4, subfamily K, member 1 -1.21083
METTL20 methyltransferase like 20 -1.19352
ZNF605 zinc finger protein 605 -1.19055
PBX1 pre-B-cell leukemia homeobox 1 -1.18985
CLEC4G C-type lectin domain family 4, member G -1.18962
CCDC122 coiled-coil domain containing 122 -1.17485
GPR15 G protein-coupled receptor 15 -1.15941
TP73 tumor protein p73 -1.15671
FAM46D family with sequence similarity 46, member D -1.15416
HOXD13 homeobox D13 -1.15412
RAMP1 receptor (G protein-coupled) activity modifying protein 1 -1.14969
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1 -1.13666
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -1.13152
MS4A2 membrane-spanning 4-domains, subfamily A, member 2 -1.13087
INSRR insulin receptor-related receptor -1.12979
C1ORF210 chromosome 1 open reading frame 210 -1.12816
CES5A carboxylesterase 5A -1.11976
RILPL2 Rab interacting lysosomal protein-like 2 -1.11424
IL12RB2 interleukin 12 receptor, beta 2 -1.10797
GSTK1 glutathione S-transferase kappa 1 -1.10781
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16 -1.10463
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 -1.10218
TNNT2 troponin T type 2 (cardiac) -1.09637
TEKT5 tektin 5 -1.09527
FGF17 fibroblast growth factor 17 -1.09422
CEP112 centrosomal protein 112kDa -1.094
RWDD3 RWD domain containing 3 -1.09229
MYO1H myosin IH -1.09197
MZF1 myeloid zinc finger 1 -1.09116
ACVR1C activin A receptor, type IC -1.07843
OSMR oncostatin M receptor -1.0731
TNFRSF8 tumor necrosis factor receptor superfamily, member 8 -1.06938
LHX6 LIM homeobox 6 -1.06288
TNS4 tensin 4 -1.06113
C1ORF194 chromosome 1 open reading frame 194 -1.05933
NUPR1L nuclear protein, transcriptional regulator, 1-like -1.0561
STXBP2 syntaxin binding protein 2 -1.04055
TRIP13 thyroid hormone receptor interactor 13 -1.03972
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 -1.03694
ZNF580 zinc finger protein 580 -1.03323
PLIN1 perilipin 1 -1.03283
CYB5R2 cytochrome b5 reductase 2 -1.03045
SHC4 SHC (Src homology 2 domain containing) family, member 4 -1.01481
CEACAM19 carcinoembryonic antigen-related cell adhesion molecule 19 -1.0053
SLURP1 secreted LY6/PLAUR domain containing 1 -1.00404
LCN10 lipocalin 10 -1.00383
DPEP2 dipeptidase 2 -1.00261
GK5 glycerol kinase 5 (putative) -1.0013