igm immunoglobulin complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and in its circulating form complexed with J chain in polymeric forms. An IgM immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph. (Gene Ontology, GO_0071753)
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Genes

142 proteins co-occuring with the igm immunoglobulin complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CD79A CD79a molecule, immunoglobulin-associated alpha 2.34482
CD5 CD5 molecule 1.88763
CD19 CD19 molecule 1.84497
CD40 CD40 molecule, TNF receptor superfamily member 5 1.50848
CD22 CD22 molecule 1.42993
CD79B CD79b molecule, immunoglobulin-associated beta 1.31681
CD38 CD38 molecule 1.28569
CD40LG CD40 ligand 1.14955
CD72 CD72 molecule 1.12245
CD4 CD4 molecule 1.07866
BCR breakpoint cluster region 1.07562
IL4 interleukin 4 1.0109
LYN LYN proto-oncogene, Src family tyrosine kinase 0.986342
MS4A1 membrane-spanning 4-domains, subfamily A, member 1 0.940215
PAX5 paired box 5 0.896257
CCND1 cyclin D1 0.816699
THY1 Thy-1 cell surface antigen 0.813028
IL7 interleukin 7 0.813028
IGHV5-51 immunoglobulin heavy variable 5-51 0.804313
CD8BP CD8b molecule pseudogene 0.767715
CRNN cornulin 0.75317
PRDM1 PR domain containing 1, with ZNF domain 0.698663
CD27 CD27 molecule 0.691202
CMTM7 CKLF-like MARVEL transmembrane domain containing 7 0.682463
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis) 0.673762
FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23) 0.669425
CD24 CD24 molecule 0.646145
IGHV4-39 immunoglobulin heavy variable 4-39 0.631598
SYK spleen tyrosine kinase 0.623504
FCRL5 Fc receptor-like 5 0.622229
IPP intracisternal A particle-promoted polypeptide 0.621804
IL2 interleukin 2 0.615437
IGH immunoglobulin heavy locus 0.606973
SLC22A16 solute carrier family 22 (organic cation/carnitine transporter), member 16 0.598117
STAP2 signal transducing adaptor family member 2 0.583012
ADAMDEC1 ADAM-like, decysin 1 0.579669
CCDC112 coiled-coil domain containing 112 0.578833
PAX2 paired box 2 0.578416
PTPRC protein tyrosine phosphatase, receptor type, C 0.577999
CR2 complement component (3d/Epstein Barr virus) receptor 2 0.575495
CDR1 cerebellar degeneration-related protein 1, 34kDa 0.568001
SPIC Spi-C transcription factor (Spi-1/PU.1 related) 0.555973
AICDA activation-induced cytidine deaminase 0.543176
IGHV3-9 immunoglobulin heavy variable 3-9 0.533309
RAG2 recombination activating gene 2 0.532488
C8G complement component 8, gamma polypeptide 0.532078
IGLV7-43 immunoglobulin lambda variable 7-43 0.527569
CD69 CD69 molecule 0.486096
CD34 CD34 molecule 0.484886
IL5 interleukin 5 0.476831
NPB neuropeptide B 0.471208
PREB prolactin regulatory element binding 0.468802
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.4676
CD37 CD37 molecule 0.449643
TFRC transferrin receptor 0.441708
IL1A interleukin 1, alpha 0.429465
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 0.416511
TRAC T cell receptor alpha constant 0.409089
SPN sialophorin 0.40675
TREML1 triggering receptor expressed on myeloid cells-like 1 0.404026
BTK Bruton agammaglobulinemia tyrosine kinase 0.401304
TGFB1 transforming growth factor, beta 1 0.390841
CD70 CD70 molecule 0.382354
C3 complement component 3 0.380814
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta 0.37966
TNP1 transition protein 1 (during histone to protamine replacement) 0.378507
CCND2 cyclin D2 0.368536
DNTT DNA nucleotidylexotransferase 0.363185
BLK BLK proto-oncogene, Src family tyrosine kinase 0.36204
B2M beta-2-microglobulin 0.356324
CD180 CD180 molecule 0.355183
ZFP36L1 ZFP36 ring finger protein-like 1 0.344935
ALB albumin 0.340017
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.329461
LATS1 large tumor suppressor kinase 1 0.326078
SELL selectin L 0.323075
FYN FYN proto-oncogene, Src family tyrosine kinase 0.321575
KRTAP1-3 keratin associated protein 1-3 0.316334
GPR176 G protein-coupled receptor 176 0.311851
CR1 complement component (3b/4b) receptor 1 (Knops blood group) 0.308494
IRF4 interferon regulatory factor 4 0.30626
CD58 CD58 molecule 0.304399
LYZ lysozyme 0.300682
FASLG Fas ligand (TNF superfamily, member 6) 0.298084
CD93 CD93 molecule 0.296972
FGR FGR proto-oncogene, Src family tyrosine kinase 0.290678
PDE9A phosphodiesterase 9A 0.290308
CXCL9 chemokine (C-X-C motif) ligand 9 0.286245
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.283663
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.279612
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) 0.278877
KRTAP1-1 keratin associated protein 1-1 0.275202
CD6 CD6 molecule 0.274468
KRT84 keratin 84, type II 0.268237
BCL6 B-cell CLL/lymphoma 6 0.268237
SLA Src-like-adaptor 0.267139
SPIB Spi-B transcription factor (Spi-1/PU.1 related) 0.256925
B3GAT1 beta-1,3-glucuronyltransferase 1 0.256561
ICAM1 intercellular adhesion molecule 1 0.253653
PHAX phosphorylated adaptor for RNA export 0.252564
XBP1 X-box binding protein 1 0.250026
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.244962
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.243519
HCLS1 hematopoietic cell-specific Lyn substrate 1 0.235607
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 0.234174
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.233817
CD81 CD81 molecule 0.232744
IL13 interleukin 13 0.232386
LPO lactoperoxidase 0.229888
HP haptoglobin 0.225622
CCNG2 cyclin G2 0.22279
POU2AF1 POU class 2 associating factor 1 0.22279
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.219265
OAT ornithine aminotransferase 0.215063
HPR haptoglobin-related protein 0.209858
CD1E CD1e molecule 0.209169
LCK LCK proto-oncogene, Src family tyrosine kinase 0.208481
BET1 Bet1 golgi vesicular membrane trafficking protein 0.204039
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.202684
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.194371
NCAM1 neural cell adhesion molecule 1 0.188274
PGM3 phosphoglucomutase 3 0.18796
DUSP5 dual specificity phosphatase 5 0.177154
SELENBP1 selenium binding protein 1 0.175466
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit) 0.170888
TMPO thymopoietin 0.170629
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.166884
CD1D CD1d molecule 0.165463
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.165231
CD8A CD8a molecule 0.164315
BCL2 B-cell CLL/lymphoma 2 0.164315
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta 0.161275
BCL2L1 BCL2-like 1 0.158882
TCL1A T-cell leukemia/lymphoma 1A 0.13676
POLM polymerase (DNA directed), mu 0.136716
EGR1 early growth response 1 0.136641
HOPX HOP homeobox 0.136551
CCNG1 cyclin G1 0.136475
DCXR dicarbonyl/L-xylulose reductase 0.136322
SIGLEC10 sialic acid binding Ig-like lectin 10 0.136119
UNK unkempt family zinc finger 0.136103
IGBP1 immunoglobulin (CD79A) binding protein 1 0.135879