granular vesicle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A cytoplasmic membrane-bounded vesicle of varying size, but usually larger than 45 nm, with an electron dense granular core, found in noradrenergic and peptidergic cells. (Gene Ontology, GO_1990005)
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Genes

66 proteins co-occuring with the granular vesicle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 1.5514
TAC1 tachykinin, precursor 1 1.40466
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1.38738
PDYN prodynorphin 1.2055
NPS neuropeptide S 1.18338
SCG5 secretogranin V 1.08781
NPY neuropeptide Y 1.08222
VIP vasoactive intestinal peptide 1.01238
AVP arginine vasopressin 0.974682
TH tyrosine hydroxylase 0.895794
CALCA calcitonin-related polypeptide alpha 0.818075
POMC proopiomelanocortin 0.736014
PENK proenkephalin 0.733768
TRH thyrotropin-releasing hormone 0.720351
INSM2 insulinoma-associated 2 0.684644
ACHE acetylcholinesterase (Yt blood group) 0.677238
PNMT phenylethanolamine N-methyltransferase 0.644429
SST somatostatin 0.617133
CRH corticotropin releasing hormone 0.583431
P2RY14 purinergic receptor P2Y, G-protein coupled, 14 0.583012
PPBPP1 pro-platelet basic protein pseudogene 1 0.518981
GAL galanin/GMAP prepropeptide 0.482467
CCK cholecystokinin 0.472813
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4 0.464397
AMT aminomethyltransferase 0.397035
NPTX2 neuronal pentraxin II 0.390455
RORC RAR-related orphan receptor C 0.366623
SYNPR synaptoporin 0.35899
CHGA chromogranin A 0.350622
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.343421
RNPEP arginyl aminopeptidase (aminopeptidase B) 0.324576
SYT3 synaptotagmin III 0.308867
NTS neurotensin 0.305515
GDI2 GDP dissociation inhibitor 2 0.294378
NMU neuromedin U 0.281821
TRPC7 transient receptor potential cation channel, subfamily C, member 7 0.274835
LNPEP leucyl/cystinyl aminopeptidase 0.273734
NGF nerve growth factor (beta polypeptide) 0.267871
PPY pancreatic polypeptide 0.265311
SYP synaptophysin 0.262025
RAB3A RAB3A, member RAS oncogene family 0.256197
THOP1 thimet oligopeptidase 1 0.253291
GHRL ghrelin/obestatin prepropeptide 0.247492
REN renin 0.246769
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.233459
OXT oxytocin/neurophysin I prepropeptide 0.214017
UTS2 urotensin 2 0.204718
PAM peptidylglycine alpha-amidating monooxygenase 0.202346
REST RE1-silencing transcription factor 0.196339
CGB5 chorionic gonadotropin, beta polypeptide 5 0.195681
CGB7 chorionic gonadotropin, beta polypeptide 7 0.195681
CGB chorionic gonadotropin, beta polypeptide 0.188274
CGB8 chorionic gonadotropin, beta polypeptide 8 0.186708
SYT2 synaptotagmin II 0.177724
GRP gastrin-releasing peptide 0.176305
RAB3D RAB3D, member RAS oncogene family 0.175466
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.139897
NSF N-ethylmaleimide-sensitive factor 0.13976
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 0.139047
CHGB chromogranin B 0.13889
P2RY2 purinergic receptor P2Y, G-protein coupled, 2 0.138287
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.138237
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8) 0.137645
INS insulin 0.136936
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.136536
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 0.136307