germ cell nucleus Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The nucleus of a germ cell, a reproductive cell in multicellular organisms. (Gene Ontology, GO_0043073)
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Genes

277 proteins co-occuring with the germ cell nucleus cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
C19ORF26 chromosome 19 open reading frame 26 1.83951
CDK1 cyclin-dependent kinase 1 1.57188
CCNB1 cyclin B1 1.474
CCNB2 cyclin B2 1.47231
GDF9 growth differentiation factor 9 1.41923
BMP15 bone morphogenetic protein 15 1.35813
NPM2 nucleophosmin/nucleoplasmin 2 1.23348
WEE2 WEE1 homolog 2 (S. pombe) 1.1199
H1FOO H1 histone family, member O, oocyte-specific 1.09238
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 1.07106
CDC25B cell division cycle 25B 1.05287
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.992204
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.962627
TNFAIP6 tumor necrosis factor, alpha-induced protein 6 0.954483
AREG amphiregulin 0.93596
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 0.930774
PADI6 peptidyl arginine deiminase, type VI 0.90321
ZAR1 zygote arrest 1 0.885628
INS insulin 0.846532
COIL coilin 0.830466
IGF1 insulin-like growth factor 1 (somatomedin C) 0.819911
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.819911
EREG epiregulin 0.804772
GPR149 G protein-coupled receptor 149 0.795145
NLRP5 NLR family, pyrin domain containing 5 0.793313
SLC30A9 solute carrier family 30 (zinc transporter), member 9 0.773645
IFI30 interferon, gamma-inducible protein 30 0.766804
AURKA aurora kinase A 0.746381
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 0.744574
OOSP1 oocyte secreted protein 1, pseudogene 0.742318
YBX2 Y box binding protein 2 0.740064
HAS2 hyaluronan synthase 2 0.725705
FGD3 FYVE, RhoGEF and PH domain containing 3 0.722134
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 0.71946
TUBA1A tubulin, alpha 1a 0.715014
FIGLA folliculogenesis specific basic helix-loop-helix 0.712795
HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 0.707482
RPS6 ribosomal protein S6 0.689451
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.682899
PLK2 polo-like kinase 2 0.67463
NLRP9 NLR family, pyrin domain containing 9 0.660776
SLC39A12 solute carrier family 39 (zinc transporter), member 12 0.651729
POU5F1 POU class 5 homeobox 1 0.633305
POU5F1B POU class 5 homeobox 1B 0.62393
PLK1 polo-like kinase 1 0.622654
SLC30A6 solute carrier family 30 (zinc transporter), member 6 0.611625
ZP2 zona pellucida glycoprotein 2 (sperm receptor) 0.609509
EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 0.600223
LHCGR luteinizing hormone/choriogonadotropin receptor 0.597697
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.594753
H3F3B H3 histone, family 3B (H3.3B) 0.590973
H3F3A H3 histone, family 3A 0.590973
CDC25C cell division cycle 25C 0.590553
CCNJ cyclin J 0.589295
FANK1 fibronectin type III and ankyrin repeat domains 1 0.585942
GPR3 G protein-coupled receptor 3 0.584686
GBX1 gastrulation brain homeobox 1 0.565923
WEE1 WEE1 G2 checkpoint kinase 0.549773
FSHR follicle stimulating hormone receptor 0.546885
SRSF2 serine/arginine-rich splicing factor 2 0.54194
HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 0.535361
HIST1H4I histone cluster 1, H4i 0.533309
HIST2H4B histone cluster 2, H4b 0.533309
HIST2H4A histone cluster 2, H4a 0.533309
HIST1H4C histone cluster 1, H4c 0.533309
HIST1H4B histone cluster 1, H4b 0.533309
HIST1H4A histone cluster 1, H4a 0.533309
HIST1H4F histone cluster 1, H4f 0.533309
HIST1H4E histone cluster 1, H4e 0.533309
HIST1H4D histone cluster 1, H4d 0.533309
HIST1H4K histone cluster 1, H4k 0.533309
HIST1H4J histone cluster 1, H4j 0.533309
HIST1H4H histone cluster 1, H4h 0.533309
HIST4H4 histone cluster 4, H4 0.532898
HIST1H4L histone cluster 1, H4l 0.532898
PDE4A phosphodiesterase 4A, cAMP-specific 0.528798
RBMXL2 RNA binding motif protein, X-linked-like 2 0.521432
BNC1 basonuclin 1 0.516532
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.51164
FBLL1 fibrillarin-like 1 0.511233
PGF placental growth factor 0.511233
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.511233
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.511233
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.509604
CBS cystathionine-beta-synthase 0.49742
CCRL2 chemokine (C-C motif) receptor-like 2 0.49499
SCAMP4 secretory carrier membrane protein 4 0.49499
ELL3 elongation factor RNA polymerase II-like 3 0.488519
ALB albumin 0.477233
SLC39A10 solute carrier family 39 (zinc transporter), member 10 0.473617
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 0.466399
FRRS1L ferric-chelate reductase 1-like 0.461998
NUMA1 nuclear mitotic apparatus protein 1 0.452029
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit 0.446069
HRAS Harvey rat sarcoma viral oncogene homolog 0.443689
GSG2 germ cell associated 2 (haspin) 0.439333
NPBWR2 neuropeptides B/W receptor 2 0.438542
TRIB2 tribbles pseudokinase 2 0.436565
HOXC9 homeobox C9 0.43617
TLE6 transducin-like enhancer of split 6 0.433012
GJA1 gap junction protein, alpha 1, 43kDa 0.433012
PKMYT1 protein kinase, membrane associated tyrosine/threonine 1 0.431041
DND1 DND microRNA-mediated repression inhibitor 1 0.431041
SNRPC small nuclear ribonucleoprotein polypeptide C 0.431041
SLC39A9 solute carrier family 39, member 9 0.426318
MED18 mediator complex subunit 18 0.419644
CDK7 cyclin-dependent kinase 7 0.415337
NANOG Nanog homeobox 0.412601
ZP4 zona pellucida glycoprotein 4 0.410259
MAPK3 mitogen-activated protein kinase 3 0.405193
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.404804
ZHX2 zinc fingers and homeoboxes 2 0.401693
NANOS3 nanos homolog 3 (Drosophila) 0.395873
DMRTA1 DMRT-like family A1 0.385051
FST follistatin 0.379276
RHCG Rh family, C glycoprotein 0.374666
TBP TATA box binding protein 0.368536
SLC39A13 solute carrier family 39 (zinc transporter), member 13 0.368153
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1 0.363949
MAPK15 mitogen-activated protein kinase 15 0.361659
SMC1B structural maintenance of chromosomes 1B 0.361277
PAQR8 progestin and adipoQ receptor family member VIII 0.357467
KIF11 kinesin family member 11 0.350243
PAPOLB poly(A) polymerase beta (testis specific) 0.347208
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1 0.336241
AURKB aurora kinase B 0.334356
AVEN apoptosis, caspase activation inhibitor 0.332848
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) 0.32195
STAG3 stromal antigen 3 0.319702
PGRMC1 progesterone receptor membrane component 1 0.319328
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 0.31596
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.31596
PTDSS2 phosphatidylserine synthase 2 0.313344
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 0.309613
PHF20 PHD finger protein 20 0.308867
CCNO cyclin O 0.308494
CSN1S1 casein alpha s1 0.301425
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 0.301054
KSR1 kinase suppressor of ras 1 0.300682
SLC30A7 solute carrier family 30 (zinc transporter), member 7 0.299197
UBC ubiquitin C 0.298826
INCENP inner centromere protein antigens 135/155kDa 0.298826
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.296972
IGF2R insulin-like growth factor 2 receptor 0.29586
OPRD1 opioid receptor, delta 1 0.295119
NEUROG3 neurogenin 3 0.294748
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.292157
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 0.291787
SPAG16 sperm associated antigen 16 0.289569
NANOS1 nanos homolog 1 (Drosophila) 0.288829
NOBOX NOBOX oogenesis homeobox 0.28846
CNTLN centlein, centrosomal protein 0.286614
MAPK14 mitogen-activated protein kinase 14 0.285507
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.285138
BCL2L10 BCL2-like 10 (apoptosis facilitator) 0.284032
HDAC1 histone deacetylase 1 0.283663
NPPC natriuretic peptide C 0.278509
PTGER3 prostaglandin E receptor 3 (subtype EP3) 0.277406
RPS27A ribosomal protein S27a 0.276671
ZP1 zona pellucida glycoprotein 1 (sperm receptor) 0.275936
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) 0.273367
DPPA4 developmental pluripotency associated 4 0.271167
DYNLT3 dynein, light chain, Tctex-type 3 0.271167
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.2708
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.270434
PSMB6 proteasome (prosome, macropain) subunit, beta type, 6 0.269335
MBP myelin basic protein 0.268237
FGF1 fibroblast growth factor 1 (acidic) 0.266408
DAZL deleted in azoospermia-like 0.266408
RBKS ribokinase 0.264946
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha 0.264946
ADCY2 adenylate cyclase 2 (brain) 0.263485
CDK2 cyclin-dependent kinase 2 0.262025
UBB ubiquitin B 0.262025
SUCLG1 succinate-CoA ligase, alpha subunit 0.260566
SPATA16 spermatogenesis associated 16 0.258745
SNRPN small nuclear ribonucleoprotein polypeptide N 0.257289
PDE4D phosphodiesterase 4D, cAMP-specific 0.256925
ADCY3 adenylate cyclase 3 0.253291
CSNK2B casein kinase 2, beta polypeptide 0.248578
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.246046
BUB3 BUB3 mitotic checkpoint protein 0.245685
PAQR7 progestin and adipoQ receptor family member VII 0.245685
SELPLG selectin P ligand 0.242076
SLC39A7 solute carrier family 39 (zinc transporter), member 7 0.240636
PFKL phosphofructokinase, liver 0.240276
ADCY9 adenylate cyclase 9 0.240276
HOXC6 homeobox C6 0.239916
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.238837
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 0.23776
GPR1 G protein-coupled receptor 1 0.23776
HOXA4 homeobox A4 0.237401
PLAT plasminogen activator, tissue 0.236683
TRPC7 transient receptor potential cation channel, subfamily C, member 7 0.236324
TRIM37 tripartite motif containing 37 0.236324
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.235966
FBXO5 F-box protein 5 0.234174
GAS6 growth arrest-specific 6 0.233459
LIN28B lin-28 homolog B (C. elegans) 0.232029
BMP10 bone morphogenetic protein 10 0.231672
PDE4DIP phosphodiesterase 4D interacting protein 0.229176
NCAPD2 non-SMC condensin I complex, subunit D2 0.224913
PPP2R4 protein phosphatase 2A activator, regulatory subunit 4 0.224558
SMC3 structural maintenance of chromosomes 3 0.224204
NCL nucleolin 0.221378
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.220673
CLTA clathrin, light chain A 0.220321
NPM3 nucleophosmin/nucleoplasmin 3 0.219617
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.219265
PKN2 protein kinase N2 0.218914
C5ORF38 chromosome 5 open reading frame 38 0.218914
DUSP6 dual specificity phosphatase 6 0.217511
BIRC5 baculoviral IAP repeat containing 5 0.215761
TOP1 topoisomerase (DNA) I 0.215412
KITLG KIT ligand 0.21228
MGAM maltase-glucoamylase 0.209513
STAU2 staufen double-stranded RNA binding protein 2 0.207108
ESR1 estrogen receptor 1 0.206082
DUSP3 dual specificity phosphatase 3 0.206082
IKZF3 IKAROS family zinc finger 3 (Aiolos) 0.203361
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 0.202346
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.202346
CSNK2A1 casein kinase 2, alpha 1 polypeptide 0.199325
H2AFB1 H2A histone family, member B1 0.198991
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 0.198991
LINS lines homolog (Drosophila) 0.196999
H2AFB2 H2A histone family, member B2 0.19601
ARNTL aryl hydrocarbon receptor nuclear translocator-like 0.195681
TDRD7 tudor domain containing 7 0.190814
NCAPD3 non-SMC condensin II complex, subunit D3 0.188905
ADCY8 adenylate cyclase 8 (brain) 0.18796
PRL prolactin 0.18702
DPPA2 developmental pluripotency associated 2 0.184853
BTC betacellulin 0.183935
LDHC lactate dehydrogenase C 0.183631
DNTT DNA nucleotidylexotransferase 0.182422
PDE9A phosphodiesterase 9A 0.181524
GJB1 gap junction protein, beta 1, 32kDa 0.180339
SLC30A2 solute carrier family 30 (zinc transporter), member 2 0.179752
PRPS1 phosphoribosyl pyrophosphate synthetase 1 0.179459
RHOBTB2 Rho-related BTB domain containing 2 0.179167
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.178588
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 0.178299
MAD2L1P1 MAD2 mitotic arrest deficient-like 1 (yeast) pseudogene 1 0.178011
RET ret proto-oncogene 0.177154
MAPK1 mitogen-activated protein kinase 1 0.172735
RBMY1A1 RNA binding motif protein, Y-linked, family 1, member A1 0.172201
SPIN1 spindlin 1 0.171937
RCC1 regulator of chromosome condensation 1 0.171673
SLBP stem-loop binding protein 0.171149
ADCY6 adenylate cyclase 6 0.170888
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.169099
SMS spermine synthase 0.168598
LMNA lamin A/C 0.168598
PGR progesterone receptor 0.167856
INHBB inhibin, beta B 0.166884
CXXC1 CXXC finger protein 1 0.165932
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.165463
NLRP2 NLR family, pyrin domain containing 2 0.163865
AMHR2 anti-Mullerian hormone receptor, type II 0.163641
NDC80 NDC80 kinetochore complex component 0.1632
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.162763
HES4 hes family bHLH transcription factor 4 0.161693
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 0.161693
CDX2 caudal type homeobox 2 0.161275
G6PD glucose-6-phosphate dehydrogenase 0.160053
TRIB1 tribbles pseudokinase 1 0.159268
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) 0.158315
JMY junction mediating and regulatory protein, p53 cofactor 0.15776
ACR acrosin 0.140627
CMKLR1 chemerin chemokine-like receptor 1 0.136056
PDCD6IP programmed cell death 6 interacting protein 0.135879
LIG1 ligase I, DNA, ATP-dependent 0.133434
UNG uracil-DNA glycosylase 0.133278
LIG3 ligase III, DNA, ATP-dependent 0.133194
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.132315
LIG4 ligase IV, DNA, ATP-dependent 0.130922