genomewide Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

410 genes co-occuring with the biological term genomewide in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ACAN aggrecan
ACE angiotensin I converting enzyme
ACKR1 atypical chemokine receptor 1 (Duffy blood group)
ACTN2 actinin, alpha 2
ADAD1 adenosine deaminase domain containing 1 (testis-specific)
ADAM33 ADAM metallopeptidase domain 33
ADIPOQ adiponectin, C1Q and collagen domain containing
ADIPOR1 adiponectin receptor 1
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALK anaplastic lymphoma receptor tyrosine kinase
ANKRD55 ankyrin repeat domain 55
ANOS1 anosmin 1
APOA1 apolipoprotein A-I
APOB apolipoprotein B
APOE apolipoprotein E
APOL1 apolipoprotein L, 1
APP amyloid beta (A4) precursor protein
ARHGAP10 Rho GTPase activating protein 10
ARHGAP29 Rho GTPase activating protein 29
ARSG arylsulfatase G
ART3 ADP-ribosyltransferase 3
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
ATG16L2 autophagy related 16-like 2 (S. cerevisiae)
ATM ATM serine/threonine kinase
ATOH7 atonal homolog 7 (Drosophila)
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
AUTS2 autism susceptibility candidate 2
BACE2 beta-site APP-cleaving enzyme 2
BAG4 BCL2-associated athanogene 4
BASP1 brain abundant, membrane attached signal protein 1
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
BST1 bone marrow stromal cell antigen 1
BTNL2 butyrophilin-like 2
C1QTNF7 C1q and tumor necrosis factor related protein 7
C4BPA complement component 4 binding protein, alpha
C4BPB complement component 4 binding protein, beta
C9ORF72 chromosome 9 open reading frame 72
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CACNB4 calcium channel, voltage-dependent, beta 4 subunit
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CAPN10 calpain 10
CARD9 caspase recruitment domain family, member 9
CASR calcium-sensing receptor
CAV1 caveolin 1, caveolae protein, 22kDa
CCL2 chemokine (C-C motif) ligand 2
CD44 CD44 molecule (Indian blood group)
CD58 CD58 molecule
CDH13 cadherin 13
CDHR3 cadherin-related family member 3
CDK6 cyclin-dependent kinase 6
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1
CDKN2B-AS1 CDKN2B antisense RNA 1
CDX2 caudal type homeobox 2
CELF1 CUGBP, Elav-like family member 1
CELIAC2 celiac disease 2
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CH25H cholesterol 25-hydroxylase
CHL1 cell adhesion molecule L1-like
CLDN2 claudin 2
CLEC16A C-type lectin domain family 16, member A
CLU clusterin
COL5A1 collagen, type V, alpha 1
COPS2 COP9 signalosome subunit 2
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CREBBP CREB binding protein
CRP C-reactive protein, pentraxin-related
CSF1R colony stimulating factor 1 receptor
CSK c-src tyrosine kinase
CTC1 CTS telomere maintenance complex component 1
CTCF CCCTC-binding factor (zinc finger protein)
CTCFL CCCTC-binding factor (zinc finger protein)-like
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTNND2 catenin (cadherin-associated protein), delta 2
CTPS2 CTP synthase 2
CUX1 cut-like homeobox 1
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
CYP46A1 cytochrome P450, family 46, subfamily A, polypeptide 1
DCC DCC netrin 1 receptor
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DEXI Dexi homolog (mouse)
DFNA27 deafness, autosomal dominant 27
DFNB33 deafness, autosomal recessive 33
DHFR dihydrofolate reductase
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DISC1 disrupted in schizophrenia 1
DLG3 discs, large homolog 3 (Drosophila)
DNMT1 DNA (cytosine-5-)-methyltransferase 1
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like
DPP6 dipeptidyl-peptidase 6
DRD2 dopamine receptor D2
DTNBP1 dystrobrevin binding protein 1
DUSP9 dual specificity phosphatase 9
EBI3 Epstein-Barr virus induced 3
EFNA1 ephrin-A1
EGFR epidermal growth factor receptor
EGLN1 egl-9 family hypoxia-inducible factor 1
EGR1 early growth response 1
EHMT2 euchromatic histone-lysine N-methyltransferase 2
ELAVL1 ELAV like RNA binding protein 1
ELF1 E74-like factor 1 (ets domain transcription factor)
ELK1 ELK1, member of ETS oncogene family
ELOVL5 ELOVL fatty acid elongase 5
EP300 E1A binding protein p300
EPHA2 EPH receptor A2
EQTN equatorin, sperm acrosome associated
ERBB2 erb-b2 receptor tyrosine kinase 2
ERBB4 erb-b2 receptor tyrosine kinase 4
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FAIM2 Fas apoptotic inhibitory molecule 2
FAM92B family with sequence similarity 92, member B
FAS Fas cell surface death receptor
FASN fatty acid synthase
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FGFR1 fibroblast growth factor receptor 1
FH fumarate hydratase
FKBPL FK506 binding protein like
FLG filaggrin
FLI1 Fli-1 proto-oncogene, ETS transcription factor
FN1 fibronectin 1
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXC1 forkhead box C1
FPGS folylpolyglutamate synthase
FRMD6 FERM domain containing 6
FTO fat mass and obesity associated
FUS FUS RNA binding protein
G6PC2 glucose-6-phosphatase, catalytic, 2
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1
GABRD gamma-aminobutyric acid (GABA) A receptor, delta
GATA1 GATA binding protein 1 (globin transcription factor 1)
GATA2 GATA binding protein 2
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GCG glucagon
GDF5 growth differentiation factor 5
GIMAP4 GTPase, IMAP family member 4
GINS3 GINS complex subunit 3 (Psf3 homolog)
GLUL glutamate-ammonia ligase
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GPBAR1 G protein-coupled bile acid receptor 1
GPC1 glypican 1
GPC5 glypican 5
GPSM1 G-protein signaling modulator 1
GRK5 G protein-coupled receptor kinase 5
GRM7 glutamate receptor, metabotropic 7
GRN granulin
GSTM1 glutathione S-transferase mu 1
H2AFX H2A histone family, member X
H2AFZ H2A histone family, member Z
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HDAC2 histone deacetylase 2
HHEX hematopoietically expressed homeobox
HHIP hedgehog interacting protein
HKDC1 hexokinase domain containing 1
HLA-A major histocompatibility complex, class I, A
HLA-B major histocompatibility complex, class I, B
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
HLA-DPB2 major histocompatibility complex, class II, DP beta 2 (pseudogene)
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRA major histocompatibility complex, class II, DR alpha
HMG20A high mobility group 20A
HMGA2 high mobility group AT-hook 2
HMGN5 high mobility group nucleosome binding domain 5
HNF4A hepatocyte nuclear factor 4, alpha
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HOTAIR HOX transcript antisense RNA
HOXD13 homeobox D13
HOXD9 homeobox D9
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
HTT huntingtin
ICAM1 intercellular adhesion molecule 1
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IFIH1 interferon induced with helicase C domain 1
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF1R insulin-like growth factor 1 receptor
IGFBP7 insulin-like growth factor binding protein 7
IKZF1 IKAROS family zinc finger 1 (Ikaros)
IL10 interleukin 10
IL10RA interleukin 10 receptor, alpha
IL13 interleukin 13
IL17REL interleukin 17 receptor E-like
IL18 interleukin 18
IL2 interleukin 2
IL21 interleukin 21
IL23R interleukin 23 receptor
IL2RA interleukin 2 receptor, alpha
IL6 interleukin 6
IL7R interleukin 7 receptor
INHBB inhibin, beta B
IRF6 interferon regulatory factor 6
IRF8 interferon regulatory factor 8
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2
IYD iodotyrosine deiodinase
JAZF1 JAZF zinc finger 1
KANK1 KN motif and ankyrin repeat domains 1
KCNIP4 Kv channel interacting protein 4
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KIAA0391 KIAA0391
KIAA1109 KIAA1109
KIAA1462 KIAA1462
KIF11 kinesin family member 11
KIF16B kinesin family member 16B
KIF21B kinesin family member 21B
KITLG KIT ligand
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KMT2D lysine (K)-specific methyltransferase 2D
KNG1 kininogen 1
LAMA1 laminin, alpha 1
LBX1 ladybird homeobox 1
LDLR low density lipoprotein receptor
LEPR leptin receptor
LGSN lengsin, lens protein with glutamine synthetase domain
LHX3 LIM homeobox 3
LIPC lipase, hepatic
LMNB1 lamin B1
LPA lipoprotein, Lp(a)
LRP1 low density lipoprotein receptor-related protein 1
LRP5 low density lipoprotein receptor-related protein 5
LRRC7 leucine rich repeat containing 7
LRRK2 leucine-rich repeat kinase 2
LTA lymphotoxin alpha
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MARK1 MAP/microtubule affinity-regulating kinase 1
MBD2 methyl-CpG binding domain protein 2
MBD4 methyl-CpG binding domain protein 4
MC4R melanocortin 4 receptor
MECOM MDS1 and EVI1 complex locus
MECP2 methyl CpG binding protein 2
MET MET proto-oncogene, receptor tyrosine kinase
MGMT O-6-methylguanine-DNA methyltransferase
MIR137 microRNA 137
MITF microphthalmia-associated transcription factor
MLXIPL MLX interacting protein-like
MSMB microseminoprotein, beta-
MSRB3 methionine sulfoxide reductase B3
MTMR7 myotubularin related protein 7
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MUC19 mucin 19, oligomeric
MYBPC3 myosin binding protein C, cardiac
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYO7A myosin VIIA
MYOD1 myogenic differentiation 1
NCAN neurocan
NCF2 neutrophil cytosolic factor 2
NCF4 neutrophil cytosolic factor 4, 40kDa
NCOR1 nuclear receptor corepressor 1
NCSTN nicastrin
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NELL1 NEL-like 1 (chicken)
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFYA nuclear transcription factor Y, alpha
NGDN neuroguidin, EIF4E binding protein
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1
NNMT nicotinamide N-methyltransferase
NOD2 nucleotide-binding oligomerization domain containing 2
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain)
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein
NOTCH4 notch 4
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR5A2 nuclear receptor subfamily 5, group A, member 2
NRCAM neuronal cell adhesion molecule
NRGN neurogranin (protein kinase C substrate, RC3)
OBFC1 oligonucleotide/oligosaccharide-binding fold containing 1
OTP orthopedia homeobox
PADI4 peptidyl arginine deiminase, type IV
PARK16 Parkinson disease 16 (susceptibility)
PAX5 paired box 5
PAX6 paired box 6
PCLO piccolo presynaptic cytomatrix protein
PCSK6 proprotein convertase subtilisin/kexin type 6
PCSK9 proprotein convertase subtilisin/kexin type 9
PDE4D phosphodiesterase 4D, cAMP-specific
PDK1 pyruvate dehydrogenase kinase, isozyme 1
PFKM phosphofructokinase, muscle
PHACTR1 phosphatase and actin regulator 1
PI3 peptidase inhibitor 3, skin-derived
PICALM phosphatidylinositol binding clathrin assembly protein
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PITX2 paired-like homeodomain 2
PKNOX2 PBX/knotted 1 homeobox 2
PLAUR plasminogen activator, urokinase receptor
PLG plasminogen
PMM2 phosphomannomutase 2
PPARA peroxisome proliferator-activated receptor alpha
PPARD peroxisome proliferator-activated receptor delta
PPARG peroxisome proliferator-activated receptor gamma
PRDM16 PR domain containing 16
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROM1 prominin 1
PRSS1 protease, serine, 1 (trypsin 1)
PRSS2 protease, serine, 2 (trypsin 2)
PTEN phosphatase and tensin homolog
PTPN2 protein tyrosine phosphatase, non-receptor type 2
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
PTPRD protein tyrosine phosphatase, receptor type, D
RAB29 RAB29, member RAS oncogene family
RAD51B RAD51 paralog B
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated)
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1
RBX1 ring-box 1, E3 ubiquitin protein ligase
REL v-rel avian reticuloendotheliosis viral oncogene homolog
RGS7 regulator of G-protein signaling 7
RNASEH2B ribonuclease H2, subunit B
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
RNF123 ring finger protein 123
RNLS renalase, FAD-dependent amine oxidase
RORA RAR-related orphan receptor A
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RYR2 ryanodine receptor 2 (cardiac)
SCAI suppressor of cancer cell invasion
SDC2 syndecan 2
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
SETD2 SET domain containing 2
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)
SH3RF1 SH3 domain containing ring finger 1
SIGLEC14 sialic acid binding Ig-like lectin 14
SLC16A13 solute carrier family 16, member 13
SLC17A1 solute carrier family 17 (organic anion transporter), member 1
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SLC30A8 solute carrier family 30 (zinc transporter), member 8
SLC45A3 solute carrier family 45, member 3
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
SORT1 sortilin 1
SOX12 SRY (sex determining region Y)-box 12
SP1 Sp1 transcription factor
SP7 Sp7 transcription factor
SPON1 spondin 1, extracellular matrix protein
SRBD1 S1 RNA binding domain 1
SRCAP Snf2-related CREBBP activator protein
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SREBF1 sterol regulatory element binding transcription factor 1
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1
SRSF7 serine/arginine-rich splicing factor 7
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STIP1 stress-induced phosphoprotein 1
SVIL supervillin
TAL1 T-cell acute lymphocytic leukemia 1
TARDBP TAR DNA binding protein
TCF4 transcription factor 4
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TERT telomerase reverse transcriptase
TGFB1 transforming growth factor, beta 1
TLX3 T-cell leukemia homeobox 3
TMCO1 transmembrane and coiled-coil domains 1
TMED3 transmembrane emp24 protein transport domain containing 3
TMEM106B transmembrane protein 106B
TMEM132D transmembrane protein 132D
TMEM163 transmembrane protein 163
TMEM258 transmembrane protein 258
TMEM39A transmembrane protein 39A
TMPO thymopoietin
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNXB tenascin XB
TOP2A topoisomerase (DNA) II alpha 170kDa
TP53 tumor protein p53
TPRN taperin
TRPM8 transient receptor potential cation channel, subfamily M, member 8
TSPAN2 tetraspanin 2
TYK2 tyrosine kinase 2
TYMS thymidylate synthetase
TYRO3 TYRO3 protein tyrosine kinase
U2AF2 U2 small nuclear RNA auxiliary factor 2
UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B17
UMOD uromodulin
UNC79 unc-79 homolog (C. elegans)
VAMP3 vesicle-associated membrane protein 3
VAV2 vav 2 guanine nucleotide exchange factor
VAV3 vav 3 guanine nucleotide exchange factor
VEGFA vascular endothelial growth factor A
VRK2 vaccinia related kinase 2
VWF von Willebrand factor
WDR1 WD repeat domain 1
WFS1 Wolfram syndrome 1 (wolframin)
YEATS4 YEATS domain containing 4
ZCWPW1 zinc finger, CW type with PWWP domain 1
ZEB1 zinc finger E-box binding homeobox 1
ZFHX3 zinc finger homeobox 3
ZNF366 zinc finger protein 366
ZNF433 zinc finger protein 433
ZNF676 zinc finger protein 676
ZNF804A zinc finger protein 804A