fine root Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Primary roots usually <2 mm diameter that have the function of water and nutrient uptake. They are often heavily branched and support mycorrhizas. These roots may be short lived, but are replaced by the plant in an ongoing process of root 'turnover'. (BRENDA Tissue and Enzyme Source Ontology, BTO_0005194)
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30 proteins co-occuring with the tissue fine root in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
MGAM maltase-glucoamylase 1.70246
IGSF9 immunoglobulin superfamily, member 9 1.48223
GCM2 glial cells missing homolog 2 (Drosophila) 1.41445
ZBTB25 zinc finger and BTB domain containing 25 1.321
CHRM2 cholinergic receptor, muscarinic 2 1.13944
PRODH proline dehydrogenase (oxidase) 1 1.11154
MEGF6 multiple EGF-like-domains 6 0.94867
CAND2 cullin-associated and neddylation-dissociated 2 (putative) 0.928906
MBNL1 muscleblind-like splicing regulator 1 0.921199
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.915215
CLIP1 CAP-GLY domain containing linker protein 1 0.89477
DSE dermatan sulfate epimerase 0.882051
TFG TRK-fused gene 0.83993
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.836156
PPAN peter pan homolog (Drosophila) 0.828616
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.77027
LAP3 leucine aminopeptidase 3 0.659491
LBR lamin B receptor 0.62385
LAX1 lymphocyte transmembrane adaptor 1 0.611346
GSR glutathione reductase 0.521617
SOD2 superoxide dismutase 2, mitochondrial 0.508242
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.471151
CAT catalase 0.428401
NPPB natriuretic peptide B 0.415053
GJB6 gap junction protein, beta 6, 30kDa 0.413151
TPH1 tryptophan hydroxylase 1 0.37087
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.364886
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.358174
PRTN3 proteinase 3 0.330827
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 0.243918