extrapulmonary tuberculosis Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A tuberculosis that occurs at body sites other than the lung. (Human Disease Ontology, DOID_0050598)
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Genes

220 genes co-occuring with the disease extrapulmonary tuberculosis in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
ADA adenosine deaminase 2.67443
TBP TATA box binding protein 1.98389
CD4 CD4 molecule 1.64532
TADA1 transcriptional adaptor 1 1.36204
PTBP2 polypyrimidine tract binding protein 2 1.16521
ALB albumin 1.04377
FAM135B family with sequence similarity 135, member B 1.00583
CRP C-reactive protein, pentraxin-related 0.97002
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.912668
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7 0.863456
PTBP1 polypyrimidine tract binding protein 1 0.839705
CCR7 chemokine (C-C motif) receptor 7 0.828639
CXCL10 chemokine (C-X-C motif) ligand 10 0.811001
ALPPL2 alkaline phosphatase, placental-like 2 0.801564
ALPP alkaline phosphatase, placental 0.801154
ALPL alkaline phosphatase, liver/bone/kidney 0.800744
CD79A CD79a molecule, immunoglobulin-associated alpha 0.795002
HSF2 heat shock transcription factor 2 0.795002
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 0.786803
LYZ lysozyme 0.772887
ECI2 enoyl-CoA delta isomerase 2 0.765127
CTSW cathepsin W 0.759008
AQP10 aquaporin 10 0.757378
ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8 0.739488
IL2RA interleukin 2 receptor, alpha 0.735027
OR2H2 olfactory receptor, family 2, subfamily H, member 2 0.727333
L3MBTL1 l(3)mbt-like 1 (Drosophila) 0.699116
JTB jumping translocation breakpoint 0.692697
POMC proopiomelanocortin 0.686691
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 0.670732
CXCR3 chemokine (C-X-C motif) receptor 3 0.659611
IL2 interleukin 2 0.658026
IFNG interferon, gamma 0.654067
TNF tumor necrosis factor 0.635921
LEMD1 LEM domain containing 1 0.626103
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 0.625319
SLCO6A1 solute carrier organic anion transporter family, member 6A1 0.613183
PPID peptidylprolyl isomerase D 0.605372
ZNF436 zinc finger protein 436 0.593674
PRAMEF6 PRAME family member 6 0.553627
TMSB10 thymosin beta 10 0.553239
ZNF197 zinc finger protein 197 0.552463
TRAP1 TNF receptor-associated protein 1 0.550134
FYB FYN binding protein 0.546256
CXCL9 chemokine (C-X-C motif) ligand 9 0.544318
CCL1 chemokine (C-C motif) ligand 1 0.539667
B2M beta-2-microglobulin 0.509576
DERA deoxyribose-phosphate aldolase (putative) 0.496175
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 0.482844
ACTG2 actin, gamma 2, smooth muscle, enteric 0.472982
CXCL8 chemokine (C-X-C motif) ligand 8 0.471846
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.470711
OR5K1 olfactory receptor, family 5, subfamily K, member 1 0.459751
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 0.459751
ESX1 ESX homeobox 1 0.448064
HAUS3 HAUS augmin-like complex, subunit 3 0.438658
FEZF1 FEZ family zinc finger 1 0.429266
TLR2 toll-like receptor 2 0.42589
SLC30A2 solute carrier family 30 (zinc transporter), member 2 0.419517
FEZF2 FEZ family zinc finger 2 0.418394
XCL1 chemokine (C motif) ligand 1 0.417644
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.414276
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.412779
CD27 CD27 molecule 0.408666
NELFCD negative elongation factor complex member C/D 0.389653
CCL3 chemokine (C-C motif) ligand 3 0.389281
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.384079
AVP arginine vasopressin 0.379626
CCL5 chemokine (C-C motif) ligand 5 0.378885
CD53 CD53 molecule 0.375179
FAM131C family with sequence similarity 131, member C 0.368888
KRT75 keratin 75, type II 0.362978
ZBTB17 zinc finger and BTB domain containing 17 0.360764
CST6 cystatin E/M 0.35892
ICAM1 intercellular adhesion molecule 1 0.355972
CD69 CD69 molecule 0.348614
PDE11A phosphodiesterase 11A 0.346777
IL1B interleukin 1, beta 0.345308
MMP23B matrix metallopeptidase 23B 0.344207
TRAC T cell receptor alpha constant 0.336876
ALYREF Aly/REF export factor 0.312102
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.308118
ANGPTL7 angiopoietin-like 7 0.295492
GPR148 G protein-coupled receptor 148 0.290462
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B 0.280796
CXCL11 chemokine (C-X-C motif) ligand 11 0.275445
TRIM25 tripartite motif containing 25 0.273664
LARS leucyl-tRNA synthetase 0.272597
FLNA filamin A, alpha 0.270819
ACE angiotensin I converting enzyme 0.269753
LSP1 lymphocyte-specific protein 1 0.255946
HP haptoglobin 0.251015
RERE arginine-glutamic acid dipeptide (RE) repeats 0.246098
HPR haptoglobin-related protein 0.245396
IL10RA interleukin 10 receptor, alpha 0.241546
TGFB1 transforming growth factor, beta 1 0.240847
CLCN6 chloride channel, voltage-sensitive 6 0.23945
KRT19 keratin 19, type I 0.232142
NCAM1 neural cell adhesion molecule 1 0.230409
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.227642
CGB7 chorionic gonadotropin, beta polypeptide 7 0.227297
CGB5 chorionic gonadotropin, beta polypeptide 5 0.225917
FTL ferritin, light polypeptide 0.213283
FTH1 ferritin, heavy polypeptide 1 0.212945
NOD2 nucleotide-binding oligomerization domain containing 2 0.212271
IRF2 interferon regulatory factor 2 0.210925
ENO2 enolase 2 (gamma, neuronal) 0.205585
FOXP3 forkhead box P3 0.204923
CGB chorionic gonadotropin, beta polypeptide 0.204593
CGB8 chorionic gonadotropin, beta polypeptide 8 0.203933
CD1D CD1d molecule 0.1936
PCDH15 protocadherin-related 15 0.193285
LAMP1 lysosomal-associated membrane protein 1 0.192971
CCR1 chemokine (C-C motif) receptor 1 0.188022
IL18BP interleukin 18 binding protein 0.182957
FBLN5 fibulin 5 0.180937
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A 0.177851
CD19 CD19 molecule 0.171036
B3GAT1 beta-1,3-glucuronyltransferase 1 0.168617
CCL2 chemokine (C-C motif) ligand 2 0.165435
CCL4 chemokine (C-C motif) ligand 4 0.160574
YME1L1 YME1-like 1 ATPase 0.158097
ZNF77 zinc finger protein 77 0.134136
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3 0.133451
FAM195A family with sequence similarity 195, member A 0.132087
ALAS1 5'-aminolevulinate synthase 1 0.131957
IL23A interleukin 23, alpha subunit p19 0.131301
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.1291
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.128482
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 0.127763
SDC1 syndecan 1 0.121264
REN renin 0.12118
HPSE heparanase 0.119359
GGT1 gamma-glutamyltransferase 1 0.118463
CP ceruloplasmin (ferroxidase) 0.115765
MRAP melanocortin 2 receptor accessory protein 0.104719
WAPAL wings apart-like homolog (Drosophila) 0.104341
AMELY amelogenin, Y-linked 0.100157
THRA thyroid hormone receptor, alpha 0.098861
AMELX amelogenin, X-linked 0.098678
FASLG Fas ligand (TNF superfamily, member 6) 0.098327
GRP gastrin-releasing peptide 0.096405
THY1 Thy-1 cell surface antigen 0.094968
BRCA2 breast cancer 2, early onset 0.089937
CFD complement factor D (adipsin) 0.089441
NLRP3 NLR family, pyrin domain containing 3 0.088688
CD52 CD52 molecule 0.084822
STAT1 signal transducer and activator of transcription 1, 91kDa 0.084274
BRCA1 breast cancer 1, early onset 0.084186
RER1 retention in endoplasmic reticulum sorting receptor 1 0.083
IL10 interleukin 10 0.082178
IL12RB1 interleukin 12 receptor, beta 1 0.08189
CTSS cathepsin S 0.081488
NPTX2 neuronal pentraxin II 0.081084
PTGER4 prostaglandin E receptor 4 (subtype EP4) 0.081039
F9 coagulation factor IX 0.079801
CAMP cathelicidin antimicrobial peptide 0.078118
PER2 period circadian clock 2 0.077637
NCR3 natural cytotoxicity triggering receptor 3 0.077591
S100A9 S100 calcium binding protein A9 0.077317
ACTB actin, beta 0.077019
SAA2 serum amyloid A2 0.076812
OR10K2 olfactory receptor, family 10, subfamily K, member 2 0.076696
CD22 CD22 molecule 0.07531
ACTG1 actin gamma 1 0.07517
CABIN1 calcineurin binding protein 1 0.0751
AFP alpha-fetoprotein 0.075031
NAAA N-acylethanolamine acid amidase 0.074379
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.074193
CCL17 chemokine (C-C motif) ligand 17 0.074123
PER1 period circadian clock 1 0.073891
ERBB2 erb-b2 receptor tyrosine kinase 2 0.073352
IL16 interleukin 16 0.073282
ANXA5 annexin A5 0.073212
MMP9 matrix metallopeptidase 9 0.073141
CST4 cystatin S 0.072509
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.072439
TBX21 T-box 21 0.072275
CXCR2 chemokine (C-X-C motif) receptor 2 0.072017
WDFY2 WD repeat and FYVE domain containing 2 0.07164
LARGE like-glycosyltransferase 0.07098
CD7 CD7 molecule 0.070604
IL15 interleukin 15 0.070226
CXCL12 chemokine (C-X-C motif) ligand 12 0.070036
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.069705
TREM1 triggering receptor expressed on myeloid cells 1 0.069515
KLK3 kallikrein-related peptidase 3 0.069302
IL33 interleukin 33 0.069066
A2M alpha-2-macroglobulin 0.069066
COL18A1 collagen, type XVIII, alpha 1 0.068901
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5 0.068853
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.068806
PTGDR2 prostaglandin D2 receptor 2 0.068759
PPT1 palmitoyl-protein thioesterase 1 0.068759
CD33 CD33 molecule 0.068735
WEE1 WEE1 G2 checkpoint kinase 0.068473
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 0.068164
F2 coagulation factor II (thrombin) 0.067761
ERAS ES cell expressed Ras 0.067713
CCL22 chemokine (C-C motif) ligand 22 0.067334
CCL8 chemokine (C-C motif) ligand 8 0.066739
PEPD peptidase D 0.066715
MBNL1 muscleblind-like splicing regulator 1 0.066643
LDHC lactate dehydrogenase C 0.066596
CANX calnexin 0.066334
EDN1 endothelin 1 0.066286
CST7 cystatin F (leukocystatin) 0.065573
FLT1 fms-related tyrosine kinase 1 0.065549
FBXL20 F-box and leucine-rich repeat protein 20 0.065453
MRC1 mannose receptor, C type 1 0.065095
CCR2 chemokine (C-C motif) receptor 2 0.064928
BSG basigin (Ok blood group) 0.064761
CD34 CD34 molecule 0.064451
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6 0.064261
PIDD1 p53-induced death domain protein 1 0.064237
PRTN3 proteinase 3 0.064166
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.063569
DPT dermatopontin 0.063235
BCHE butyrylcholinesterase 0.062782
TP53 tumor protein p53 0.062377