extrachromosomal dna Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description DNA structures that are not part of a chromosome. (Gene Ontology, GO_0046821)
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Genes

75 proteins co-occuring with the extrachromosomal dna cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 1.13932
PSG2 pregnancy specific beta-1-glycoprotein 2 1.01784
IGLV7-43 immunoglobulin lambda variable 7-43 0.964549
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.955917
RABAC1 Rab acceptor 1 (prenylated) 0.944007
PSG3 pregnancy specific beta-1-glycoprotein 3 0.911113
RAD52 RAD52 homolog (S. cerevisiae) 0.870885
DHFR dihydrofolate reductase 0.823123
TRAC T cell receptor alpha constant 0.8089
PAPD7 PAP associated domain containing 7 0.715902
EML4 echinoderm microtubule associated protein like 4 0.680719
NBPF10 neuroblastoma breakpoint family, member 10 0.660776
CPSF3L cleavage and polyadenylation specific factor 3-like 0.660776
ARFRP1 ADP-ribosylation factor related protein 1 0.627335
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase) 0.599802
APEH acylaminoacyl-peptide hydrolase 0.585105
HRAS Harvey rat sarcoma viral oncogene homolog 0.560114
UPRT uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) 0.557214
PHB2 prohibitin 2 0.552251
NBPF8 neuroblastoma breakpoint family, member 8 0.535361
MIER1 mesoderm induction early response 1, transcriptional regulator 0.533719
DYNLRB1 dynein, light chain, roadblock-type 1 0.515716
PREB prolactin regulatory element binding 0.51164
POLM polymerase (DNA directed), mu 0.489327
NOTO notochord homeobox 0.484079
PLS1 plastin 1 0.48287
WRN Werner syndrome, RecQ helicase-like 0.459203
SFRP2 secreted frizzled-related protein 2 0.433012
CD7 CD7 molecule 0.421997
PROK2 prokineticin 2 0.420036
LIG4 ligase IV, DNA, ATP-dependent 0.417294
TYMS thymidylate synthetase 0.406361
RAD51 RAD51 recombinase 0.406361
CNOT1 CCR4-NOT transcription complex, subunit 1 0.401304
RECQL4 RecQ protein-like 4 0.400527
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 0.38428
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa 0.383124
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.381584
DAND5 DAN domain family member 5, BMP antagonist 0.381584
POLH polymerase (DNA directed), eta 0.381199
PROCR protein C receptor, endothelial 0.371599
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.364331
MGMT O-6-methylguanine-DNA methyltransferase 0.363185
SLC16A4 solute carrier family 16, member 4 0.332848
KRT9 keratin 9, type I 0.326453
EGFR epidermal growth factor receptor 0.31783
SFRP1 secreted frizzled-related protein 1 0.311851
FGR FGR proto-oncogene, Src family tyrosine kinase 0.301054
CD6 CD6 molecule 0.298826
MCM3 minichromosome maintenance complex component 3 0.267505
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 0.267139
ERCC4 excision repair cross-complementation group 4 0.26312
IL2 interleukin 2 0.246407
CDK7 cyclin-dependent kinase 7 0.235249
PER2 period circadian clock 2 0.232386
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.230601
CDC7 cell division cycle 7 0.222436
GLB1 galactosidase, beta 1 0.22173
ZKSCAN7 zinc finger with KRAB and SCAN domains 7 0.213322
IL4 interleukin 4 0.210549
DSPP dentin sialophosphoprotein 0.208481
ERCC1 excision repair cross-complementation group 1 0.202346
LIG1 ligase I, DNA, ATP-dependent 0.18859
LIG3 ligase III, DNA, ATP-dependent 0.181823
TICAM2 toll-like receptor adaptor molecule 2 0.181227
SIRT2 sirtuin 2 0.175466
CDC14A cell division cycle 14A 0.174911
PRL prolactin 0.169859
AICDA activation-induced cytidine deaminase 0.16935
KRAS Kirsten rat sarcoma viral oncogene homolog 0.168847
CA3 carbonic anhydrase III 0.167611
HK2 hexokinase 2 0.164315
GSTM1 glutathione S-transferase mu 1 0.163641
CENPB centromere protein B, 80kDa 0.161275
RHO rhodopsin 0.159658