extrachromosomal circular dna Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Circular DNA structures that are not part of a chromosome. (Gene Ontology, GO_0005727)
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Genes

33 proteins co-occuring with the extrachromosomal circular dna cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
IGLV7-43 immunoglobulin lambda variable 7-43 1.30175
RAD52 RAD52 homolog (S. cerevisiae) 1.06296
PHB2 prohibitin 2 0.842401
WRN Werner syndrome, RecQ helicase-like 0.738263
CNOT1 CCR4-NOT transcription complex, subunit 1 0.672894
RECQL4 RecQ protein-like 4 0.67246
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.650869
TRAC T cell receptor alpha constant 0.604862
KRT9 keratin 9, type I 0.589295
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 0.523067
IL4 interleukin 4 0.459203
SIRT2 sirtuin 2 0.41612
CDC14A cell division cycle 14A 0.414946
CA3 carbonic anhydrase III 0.404026
HK2 hexokinase 2 0.398587
CENPB centromere protein B, 80kDa 0.393162
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.376202
LIG4 ligase IV, DNA, ATP-dependent 0.349105
PHB prohibitin 0.346829
HIST1H2BH histone cluster 1, H2bh 0.318953
HIST3H2BB histone cluster 3, H2bb 0.318953
HIST2H2BF histone cluster 2, H2bf 0.318953
HIST1H2BD histone cluster 1, H2bd 0.318953
HIST1H2BC histone cluster 1, H2bc 0.317456
HIST1H2BF histone cluster 1, H2bf 0.317456
HIST1H2BA histone cluster 1, H2ba 0.316334
SKP1 S-phase kinase-associated protein 1 0.310358
RAD50 RAD50 homolog (S. cerevisiae) 0.296972
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.25547
DHFR dihydrofolate reductase 0.207794
HMGB1 high mobility group box 1 0.180045
SIRT1 sirtuin 1 0.169859
RAD51 RAD51 recombinase 0.161693