extracellular matrix part Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants). (Gene Ontology, GO_0044420)
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181 proteins localized to the extracellular matrix part cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
COL12A1 collagen, type XII, alpha 1 0.663342
COL4A1 collagen, type IV, alpha 1 0.663342
COL4A2 collagen, type IV, alpha 2 0.663342
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 0.663342
HSPG2 heparan sulfate proteoglycan 2 0.663342
TINAG tubulointerstitial nephritis antigen 0.663342
COL13A1 collagen, type XIII, alpha 1 0.663342
LAMA1 laminin, alpha 1 0.663342
LAMA2 laminin, alpha 2 0.663342
COL17A1 collagen, type XVII, alpha 1 0.663342
COL4A4 collagen, type IV, alpha 4 0.663342
LAMA3 laminin, alpha 3 0.663342
ADAMTSL5 ADAMTS-like 5 0.663342
LUM lumican 0.663342
COL5A3 collagen, type V, alpha 3 0.663342
COL11A2P1 collagen, type XI, alpha 2 pseudogene 1 0.663342
ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 0.663342
AGRN agrin 0.663342
ANG angiogenin, ribonuclease, RNase A family, 5 0.663342
COL19A1 collagen, type XIX, alpha 1 0.663342
MFAP1 microfibrillar-associated protein 1 0.663342
COL11A1 collagen, type XI, alpha 1 0.663342
COL15A1 collagen, type XV, alpha 1 0.663342
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.663342
ODAM odontogenic, ameloblast asssociated 0.663342
LAMA4 laminin, alpha 4 0.663342
LAMA5 laminin, alpha 5 0.663342
COL7A1 collagen, type VII, alpha 1 0.663342
LAMC2 laminin, gamma 2 0.663342
LAMC3 laminin, gamma 3 0.663342
LAMB4 laminin, beta 4 0.663342
LAMB2 laminin, beta 2 (laminin S) 0.663342
LAMB3 laminin, beta 3 0.663342
LAMB1 laminin, beta 1 0.663342
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.663342
COL14A1 collagen, type XIV, alpha 1 0.663342
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.663342
COL11A2 collagen, type XI, alpha 2 0.663342
FBN1 fibrillin 1 0.663342
NID2 nidogen 2 (osteonidogen) 0.663342
COL6A1 collagen, type VI, alpha 1 0.663342
COL1A2 collagen, type I, alpha 2 0.663342
MFAP4 microfibrillar-associated protein 4 0.663342
COL4A5 collagen, type IV, alpha 5 0.663342
THBS4 thrombospondin 4 0.663342
COL9A1 collagen, type IX, alpha 1 0.663342
COL8A1 collagen, type VIII, alpha 1 0.663342
COL4A6 collagen, type IV, alpha 6 0.663342
NID1 nidogen 1 0.663342
COL8A2 collagen, type VIII, alpha 2 0.663342
COL16A1 collagen, type XVI, alpha 1 0.237908
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2 0.237908
APLP1 amyloid beta (A4) precursor-like protein 1 0.237908
LOXL2 lysyl oxidase-like 2 0.237908
COL1A1 collagen, type I, alpha 1 0.237908
FBN2 fibrillin 2 0.237908
ERBB2IP erbb2 interacting protein 0.237908
ACHE acetylcholinesterase (Yt blood group) 0.237908
COL10A1 collagen, type X, alpha 1 0.237908
COL2A1 collagen, type II, alpha 1 0.237908
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 0.237908
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.237908
COL18A1 collagen, type XVIII, alpha 1 0.237908
COL3A1 collagen, type III, alpha 1 0.237908
COL9A2 collagen, type IX, alpha 2 0.237908
SMC3 structural maintenance of chromosomes 3 0.237908
COL9A3 collagen, type IX, alpha 3 0.237908
ELN elastin 0.237908
P3H2 prolyl 3-hydroxylase 2 0.237908
DST dystonin 0.237908
COL5A2 collagen, type V, alpha 2 0.237908
COL5A1 collagen, type V, alpha 1 0.237908
COL6A3 collagen, type VI, alpha 3 0.237908
C1QTNF2 C1q and tumor necrosis factor related protein 2 0.098109
C1QA complement component 1, q subcomponent, A chain 0.098109
MFRP membrane frizzled-related protein 0.098109
EMILIN2 elastin microfibril interfacer 2 0.098109
C1QC complement component 1, q subcomponent, C chain 0.098109
C1QTNF9B C1q and tumor necrosis factor related protein 9B 0.098109
SFTPA1 surfactant protein A1 0.098109
SFTPA2 surfactant protein A2 0.098109
COL24A1 collagen, type XXIV, alpha 1 0.098109
EGFL6 EGF-like-domain, multiple 6 0.098109
COLEC12 collectin sub-family member 12 0.098109
COLEC10 collectin sub-family member 10 (C-type lectin) 0.098109
COL20A1 collagen, type XX, alpha 1 0.098109
EMID1 EMI domain containing 1 0.098109
CTHRC1 collagen triple helix repeat containing 1 0.098109
EDA ectodysplasin A 0.098109
C1QL4 complement component 1, q subcomponent-like 4 0.098109
C1QL3 complement component 1, q subcomponent-like 3 0.098109
WDR33 WD repeat domain 33 0.098109
C1QL2 complement component 1, q subcomponent-like 2 0.098109
C1QL1 complement component 1, q subcomponent-like 1 0.098109
COL23A1 collagen, type XXIII, alpha 1 0.098109
C1QTNF6 C1q and tumor necrosis factor related protein 6 0.098109
COL6A6 collagen, type VI, alpha 6 0.098109
C1QTNF8 C1q and tumor necrosis factor related protein 8 0.098109
C1QTNF9 C1q and tumor necrosis factor related protein 9 0.098109
C1QTNF5 C1q and tumor necrosis factor related protein 5 0.098109
SMOC2 SPARC related modular calcium binding 2 0.098109
SMOC1 SPARC related modular calcium binding 1 0.098109
C1QTNF7 C1q and tumor necrosis factor related protein 7 0.098109
C1QTNF1 C1q and tumor necrosis factor related protein 1 0.098109
C1QTNF3 C1q and tumor necrosis factor related protein 3 0.098109
MBL2 mannose-binding lectin (protein C) 2, soluble 0.098109
SCARA3 scavenger receptor class A, member 3 0.098109
HMCN1 hemicentin 1 0.098109
GLDN gliomedin 0.098109
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 0.098109
FCN1 ficolin (collagen/fibrinogen domain containing) 1 0.098109
COL22A1 collagen, type XXII, alpha 1 0.098109
VWC2 von Willebrand factor C domain containing 2 0.098109
ANXA2 annexin A2 0.098109
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.098109
COL25A1 collagen, type XXV, alpha 1 0.098109
LAD1 ladinin 1 0.098109
FCN3 ficolin (collagen/fibrinogen domain containing) 3 0.098109
COL28A1 collagen, type XXVIII, alpha 1 0.098109
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 0.098109
NTN4 netrin 4 0.098109
MSR1 macrophage scavenger receptor 1 0.098109
COL6A2 collagen, type VI, alpha 2 0.098109
COL6A5 collagen, type VI, alpha 5 0.098109
EMILIN1 elastin microfibril interfacer 1 0.098109
VWA1 von Willebrand factor A domain containing 1 0.098109
MARCO macrophage receptor with collagenous structure 0.098109
COL21A1 collagen, type XXI, alpha 1 0.098109
OTOL1 otolin 1 0.098109
SFTPD surfactant protein D 0.098109
CCBE1 collagen and calcium binding EGF domains 1 0.098109
COLEC11 collectin sub-family member 11 0.098109
FREM1 FRAS1 related extracellular matrix 1 0.098109
AMTN amelotin 0.098109
COL26A1 collagen, type XXVI, alpha 1 0.098109
FREM3 FRAS1 related extracellular matrix 3 0.098109
C1QB complement component 1, q subcomponent, B chain 0.098109
ADIPOQ adiponectin, C1Q and collagen domain containing 0.098109
VWA2 von Willebrand factor A domain containing 2 0.03318
CST3 cystatin C 0.03318
EGFLAM EGF-like, fibronectin type III and laminin G domains 0.03318
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 0.03318
ALB albumin 0.03318
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 0.03318
RELL2 RELT-like 2 0.03318
TNR tenascin R 0.03318
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.03318
TGFBI transforming growth factor, beta-induced, 68kDa 0.03318
COL27A1 collagen, type XXVII, alpha 1 0.03318
NTN1 netrin 1 0.03318
DCN decorin 0.03318
THBS2 thrombospondin 2 0.03318
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.03318
ITGB4 integrin, beta 4 0.03318
FREM2 FRAS1 related extracellular matrix protein 2 0.03318
TIMP1 TIMP metallopeptidase inhibitor 1 0.03318
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 0.03318
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.03318
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.03318
DLG1 discs, large homolog 1 (Drosophila) 0.03318
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.03318
FBLN1 fibulin 1 0.03318
MMRN2 multimerin 2 0.03318
PAPLN papilin, proteoglycan-like sulfated glycoprotein 0.03318
LOX lysyl oxidase 0.03318
FGF9 fibroblast growth factor 9 0.03318
SPN sialophorin 0.03318
THSD4 thrombospondin, type I, domain containing 4 0.03318
NPNT nephronectin 0.03318
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) 0.03318
FBLN5 fibulin 5 0.03318
CDH8 cadherin 8, type 2 0.03318
ITGA6 integrin, alpha 6 0.03318
CCDC80 coiled-coil domain containing 80 0.03318
TNC tenascin C 0.03318
MFAP2 microfibrillar-associated protein 2 0.03318
MFAP5 microfibrillar associated protein 5 0.03318
TIMP3 TIMP metallopeptidase inhibitor 3 0.03318
TIMP2 TIMP metallopeptidase inhibitor 2 0.03318
RUNX1 runt-related transcription factor 1 0.03318
FN1 fibronectin 1 0.03318