dna recombinase mediator complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex containing accessory proteins which bind a recombinase (e.g. Rad51) and bind single-stranded DNA (ssDNA), and promote nucleation of the recombinase onto ssDNA. (Gene Ontology, GO_0033061)
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Genes

138 proteins co-occuring with the dna recombinase mediator complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
IL17C interleukin 17C 1.91187
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 1.85868
RAD51C RAD51 paralog C 1.79707
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 1.73624
TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) 1.5565
RAD51 RAD51 recombinase 1.54857
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 1.53783
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) 1.44855
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 1.38405
RAD51B RAD51 paralog B 1.28036
CUL5 cullin 5 1.27346
CUL2 cullin 2 1.18338
CISH cytokine inducible SH2-containing protein 1.1562
CX3CL1 chemokine (C-X3-C motif) ligand 1 1.14648
RAD51D RAD51 paralog D 1.13165
RBX1 ring-box 1, E3 ubiquitin protein ligase 1.12347
TARSL2 threonyl-tRNA synthetase-like 2 1.12194
CX3CR1 chemokine (C-X3-C motif) receptor 1 1.11837
ASB6 ankyrin repeat and SOCS box containing 6 1.06498
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase 1.05337
SWI5 SWI5 recombination repair homolog (yeast) 0.989759
SFR1 SWI5-dependent recombination repair 1 0.989759
RAD52 RAD52 homolog (S. cerevisiae) 0.966956
GLUD1 glutamate dehydrogenase 1 0.961667
CBR4 carbonyl reductase 4 0.937377
CNR2 cannabinoid receptor 2 (macrophage) 0.826794
CBR3 carbonyl reductase 3 0.803855
LRRC41 leucine rich repeat containing 41 0.79927
STYK1 serine/threonine/tyrosine kinase 1 0.784156
DUS2 dihydrouridine synthase 2 0.758161
HELQ helicase, POLQ-like 0.731076
CLEC3A C-type lectin domain family 3, member A 0.723472
CLEC2B C-type lectin domain family 2, member B 0.707039
PADI3 peptidyl arginine deiminase, type III 0.703067
CLEC10A C-type lectin domain family 10, member A 0.700863
MYSM1 Myb-like, SWIRM and MPN domains 1 0.694709
ERCC3 excision repair cross-complementation group 3 0.606128
ASB2 ankyrin repeat and SOCS box containing 2 0.602331
RAD54L RAD54-like (S. cerevisiae) 0.601066
WSB1 WD repeat and SOCS box containing 1 0.593912
PRAME preferentially expressed antigen in melanoma 0.590553
FAS Fas cell surface death receptor 0.588875
XCR1 chemokine (C motif) receptor 1 0.586361
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 0.560528
XPR1 xenotropic and polytropic retrovirus receptor 1 0.490944
EPRS glutamyl-prolyl-tRNA synthetase 0.4676
DMC1 DNA meiotic recombinase 1 0.464798
DARS aspartyl-tRNA synthetase 0.460001
TLR10 toll-like receptor 10 0.457606
RAD54B RAD54 homolog B (S. cerevisiae) 0.449643
RBM15 RNA binding motif protein 15 0.447259
CCL15 chemokine (C-C motif) ligand 15 0.444085
MGAT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase 0.416902
PARK2 parkin RBR E3 ubiquitin protein ligase 0.415728
TREM1 triggering receptor expressed on myeloid cells 1 0.405582
SOX3 SRY (sex determining region Y)-box 3 0.395098
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.388137
TOLLIP toll interacting protein 0.363949
FZD4 frizzled class receptor 4 0.357086
CXCR6 chemokine (C-X-C motif) receptor 6 0.353282
CCL5 chemokine (C-C motif) ligand 5 0.329461
NIT1 nitrilase 1 0.329084
CCL8 chemokine (C-C motif) ligand 8 0.32195
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.319328
ICT1 immature colon carcinoma transcript 1 0.309613
CASP2 caspase 2, apoptosis-related cysteine peptidase 0.30924
SOCS3 suppressor of cytokine signaling 3 0.304027
CXCL11 chemokine (C-X-C motif) ligand 11 0.295119
TCEA1 transcription elongation factor A (SII), 1 0.292897
CCL22 chemokine (C-C motif) ligand 22 0.286245
MNT MAX network transcriptional repressor 0.281085
SOCS1 suppressor of cytokine signaling 1 0.270068
PER3 period circadian clock 3 0.266774
CDC34 cell division cycle 34 0.264946
PDCL phosducin-like 0.260931
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.25438
UBE2H ubiquitin-conjugating enzyme E2H 0.24894
CXCL5 chemokine (C-X-C motif) ligand 5 0.246046
CSF3 colony stimulating factor 3 (granulocyte) 0.245323
CRYZ crystallin, zeta (quinone reductase) 0.243519
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 0.240996
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.234533
BRCA2 breast cancer 2, early onset 0.225976
FANCM Fanconi anemia, complementation group M 0.21681
PCDHGA10 protocadherin gamma subfamily A, 10 0.211587
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 0.21124
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.208137
CCL3 chemokine (C-C motif) ligand 3 0.207794
SERPINF2 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 0.207451
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.205399
FBXL20 F-box and leucine-rich repeat protein 20 0.195681
MLX MLX, MAX dimerization protein 0.194371
SOCS2 suppressor of cytokine signaling 2 0.19307
PLAT plasminogen activator, tissue 0.190814
CYCS cytochrome c, somatic 0.188274
RNF31 ring finger protein 31 0.181524
ANK1 ankyrin 1, erythrocytic 0.175466
KARS lysyl-tRNA synthetase 0.172468
PYCR1 pyrroline-5-carboxylate reductase 1 0.171149
CCR1 chemokine (C-C motif) receptor 1 0.166643
CXCR1 chemokine (C-X-C motif) receptor 1 0.163641
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.121068
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.118786
LARS leucyl-tRNA synthetase 0.116698
IARS isoleucyl-tRNA synthetase 0.115691
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.115621
MLH1 mutL homolog 1 0.115068
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.114945
FASLG Fas ligand (TNF superfamily, member 6) 0.114574
IFNG interferon, gamma 0.114398
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 0.113494
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.113335
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.112823
TLR5 toll-like receptor 5 0.111845
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.111645
CUL1 cullin 1 0.111559
JAK2 Janus kinase 2 0.110583
ERCC1 excision repair cross-complementation group 1 0.110523
FGFR3 fibroblast growth factor receptor 3 0.110279
OXTR oxytocin receptor 0.108766
CXCL9 chemokine (C-X-C motif) ligand 9 0.10824
ATM ATM serine/threonine kinase 0.107637
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.107297
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.105636
MARS methionyl-tRNA synthetase 0.1056
BRCA1 breast cancer 1, early onset 0.104826
CADM1 cell adhesion molecule 1 0.10449
CAT catalase 0.103882
POLI polymerase (DNA directed) iota 0.103533
JAK1 Janus kinase 1 0.103222
PTPRC protein tyrosine phosphatase, receptor type, C 0.102787
CCR2 chemokine (C-C motif) receptor 2 0.102628
BANF1 barrier to autointegration factor 1 0.102509
F2 coagulation factor II (thrombin) 0.101822
RARS arginyl-tRNA synthetase 0.101538
GJA1 gap junction protein, alpha 1, 43kDa 0.100199
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.099772
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B 0.098947