dense fibrillar component Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins. (Gene Ontology, GO_0001651)
Similar Terms
Downloads & Tools

Genes

62 proteins co-occuring with the dense fibrillar component cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
FBLL1 fibrillarin-like 1 2.11585
NCL nucleolin 1.79574
UBTF upstream binding transcription factor, RNA polymerase I 1.26551
DCAF13 DDB1 and CUL4 associated factor 13 1.15313
NOL10 nucleolar protein 10 1.12756
NPB neuropeptide B 1.03228
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) 0.956874
NHP2 NHP2 ribonucleoprotein 0.956395
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 0.949236
LRRC75A-AS1 LRRC75A antisense RNA 1 0.94876
WDR43 WD repeat domain 43 0.947333
TBL3 transducin (beta)-like 3 0.927952
TOP1 topoisomerase (DNA) I 0.922322
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) 0.914842
DNTT DNA nucleotidylexotransferase 0.900426
WDR46 WD repeat domain 46 0.898572
COIL coilin 0.87733
RPP14 ribonuclease P/MRP 14kDa subunit 0.831843
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.822664
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 0.811193
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 0.788275
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.765438
CIRH1A cirrhosis, autosomal recessive 1A (cirhin) 0.744122
RPP38 ribonuclease P/MRP 38kDa subunit 0.733768
SRSF2 serine/arginine-rich splicing factor 2 0.692516
CBS cystathionine-beta-synthase 0.613318
POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) 0.60444
KRIT1 KRIT1, ankyrin repeat containing 0.579669
POLI polymerase (DNA directed) iota 0.572994
FGF3 fibroblast growth factor 3 0.557214
MKI67 marker of proliferation Ki-67 0.544823
MTAP methylthioadenosine phosphorylase 0.538649
ODF2 outer dense fiber of sperm tails 2 0.49661
NOP10 NOP10 ribonucleoprotein 0.488519
DEDD death effector domain containing 0.473617
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.453621
CTCFL CCCTC-binding factor (zinc finger protein)-like 0.408699
DNASE1 deoxyribonuclease I 0.351382
RAD17 RAD17 homolog (S. pombe) 0.320077
SOD1 superoxide dismutase 1, soluble 0.310732
ISG20 interferon stimulated exonuclease gene 20kDa 0.304771
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.283295
MDK midkine (neurite growth-promoting factor 2) 0.276304
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.266774
CFD complement factor D (adipsin) 0.225976
SUMO3 small ubiquitin-like modifier 3 0.203361
SUMO2 small ubiquitin-like modifier 2 0.189539
HIST1H4C histone cluster 1, H4c 0.168101
HIST1H4B histone cluster 1, H4b 0.168101
HIST1H4A histone cluster 1, H4a 0.168101
HIST2H4A histone cluster 2, H4a 0.168101
HIST1H4H histone cluster 1, H4h 0.168101
HIST1H4I histone cluster 1, H4i 0.168101
HIST1H4J histone cluster 1, H4j 0.168101
HIST1H4K histone cluster 1, H4k 0.168101
HIST2H4B histone cluster 2, H4b 0.168101
HIST1H4D histone cluster 1, H4d 0.168101
HIST1H4E histone cluster 1, H4e 0.168101
HIST4H4 histone cluster 4, H4 0.167856
HIST1H4L histone cluster 1, H4l 0.167856
HIST1H4F histone cluster 1, H4f 0.167856
CSNK2A1 casein kinase 2, alpha 1 polypeptide 0.158129