cytosolic ribosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A ribosome located in the cytosol. (Gene Ontology, GO_0022626)
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Genes

271 proteins co-occuring with the cytosolic ribosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
EIF5 eukaryotic translation initiation factor 5 1.79773
EIF5B eukaryotic translation initiation factor 5B 1.77731
EIF4B eukaryotic translation initiation factor 4B 1.62
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 1.59604
EIF4E eukaryotic translation initiation factor 4E 1.47796
EEF2 eukaryotic translation elongation factor 2 1.45364
RPS6 ribosomal protein S6 1.41586
RPL13A ribosomal protein L13a 1.36307
NMD3 NMD3 ribosome export adaptor 1.32329
EIF6 eukaryotic translation initiation factor 6 1.24812
RPS5 ribosomal protein S5 1.23713
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 1.23557
RPL24 ribosomal protein L24 1.22049
LAS1L LAS1-like (S. cerevisiae) 1.19674
RPS2 ribosomal protein S2 1.18646
RIOK2 RIO kinase 2 1.16542
RPS14 ribosomal protein S14 1.15825
RPL7 ribosomal protein L7 1.14853
RPL10A ribosomal protein L10a 1.12807
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 1.11531
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 1.07005
RPS7 ribosomal protein S7 1.06549
RPS12 ribosomal protein S12 1.02829
RPL10AP3 ribosomal protein L10a pseudogene 3 1.02131
MRPL13 mitochondrial ribosomal protein L13 1.00794
RPS20 ribosomal protein S20 0.981473
RPL10 ribosomal protein L10 0.970331
RPS15 ribosomal protein S15 0.967437
ETF1 eukaryotic translation termination factor 1 0.95831
RPS8 ribosomal protein S8 0.944956
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.927483
RPL11 ribosomal protein L11 0.923259
RPS19 ribosomal protein S19 0.912511
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.891169
EBNA1BP2 EBNA1 binding protein 2 0.885628
EIF4H eukaryotic translation initiation factor 4H 0.882399
PABPC1 poly(A) binding protein, cytoplasmic 1 0.875028
MDN1 MDN1, midasin homolog (yeast) 0.871346
EIF3CL eukaryotic translation initiation factor 3, subunit C-like 0.869505
SBDS Shwachman-Bodian-Diamond syndrome 0.863528
RPS23 ribosomal protein S23 0.860311
EIF3C eukaryotic translation initiation factor 3, subunit C 0.848828
TEX10 testis expressed 10 0.844237
RPS18 ribosomal protein S18 0.835515
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.830007
BYSL bystin-like 0.815781
CHAF1B chromatin assembly factor 1, subunit B (p60) 0.8089
ZNF185 zinc finger protein 185 (LIM domain) 0.807982
EIF3G eukaryotic translation initiation factor 3, subunit G 0.802021
RPL14 ribosomal protein L14 0.800187
WDR18 WD repeat domain 18 0.797436
RCL1 RNA terminal phosphate cyclase-like 1 0.794229
RPL29 ribosomal protein L29 0.791939
RPS15A ribosomal protein S15a 0.786444
EIF3E eukaryotic translation initiation factor 3, subunit E 0.780954
RPL36AL ribosomal protein L36a-like 0.777298
RPL23 ribosomal protein L23 0.771363
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.766804
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 0.763162
RSL24D1 ribosomal L24 domain containing 1 0.760433
RPS18P12 ribosomal protein S18 pseudogene 12 0.752263
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.750904
WDR3 WD repeat domain 3 0.747737
LARP4B La ribonucleoprotein domain family, member 4B 0.737813
LTV1 LTV1 ribosome biogenesis factor 0.727494
BMS1 BMS1 ribosome biogenesis factor 0.727047
RPS3 ribosomal protein S3 0.725258
RPL3 ribosomal protein L3 0.725258
MKNK1 MAP kinase interacting serine/threonine kinase 1 0.722134
RPL4 ribosomal protein L4 0.719906
RPS28 ribosomal protein S28 0.71946
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae) 0.713238
NGDN neuroguidin, EIF4E binding protein 0.712795
RNASEH2A ribonuclease H2, subunit A 0.711022
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae) 0.710136
RPS13 ribosomal protein S13 0.703949
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase 0.701304
RPS21 ribosomal protein S21 0.696026
SPATS2L spermatogenesis associated, serine-rich 2-like 0.687264
MGAM maltase-glucoamylase 0.676368
RPS29 ribosomal protein S29 0.675065
BOP1 block of proliferation 1 0.67463
ELF2 E74-like factor 2 (ets domain transcription factor) 0.672894
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.670725
ORAOV1 oral cancer overexpressed 1 0.667693
WBSCR22 Williams Beuren syndrome chromosome region 22 0.66726
KRTAP1-3 keratin associated protein 1-3 0.661208
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.660776
RPL27 ribosomal protein L27 0.660345
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) 0.658188
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 0.656033
EIF5A eukaryotic translation initiation factor 5A 0.644858
MRPS12 mitochondrial ribosomal protein S12 0.627761
RPL15 ribosomal protein L15 0.61968
EIF1AX eukaryotic translation initiation factor 1A, X-linked 0.61883
KRTAP1-1 keratin associated protein 1-1 0.614165
ADGRE2 adhesion G protein-coupled receptor E2 0.611625
EIF3B eukaryotic translation initiation factor 3, subunit B 0.602752
RPS25 ribosomal protein S25 0.598538
NOP14 NOP14 nucleolar protein 0.597697
PGAM5 phosphoglycerate mutase family member 5 0.597697
PRMT3 protein arginine methyltransferase 3 0.590133
RPL5 ribosomal protein L5 0.587199
PES1 pescadillo ribosomal biogenesis factor 1 0.58678
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 0.581758
ZCCHC11 zinc finger, CCHC domain containing 11 0.579669
XPO1 exportin 1 0.578833
RPL36 ribosomal protein L36 0.570913
RPL18A ribosomal protein L18a 0.566338
RIOK3 RIO kinase 3 0.562187
SLC7A10 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 0.558871
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.558042
EIF3L eukaryotic translation initiation factor 3, subunit L 0.556387
RPL9 ribosomal protein L9 0.554732
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.554318
EIF3F eukaryotic translation initiation factor 3, subunit F 0.552251
EMG1 EMG1 N1-specific pseudouridine methyltransferase 0.551425
PHF2 PHD finger protein 2 0.548947
EIF3H eukaryotic translation initiation factor 3, subunit H 0.540706
GTPBP4 GTP binding protein 4 0.532488
SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 0.529618
RPL26 ribosomal protein L26 0.52716
SECISBP2 SECIS binding protein 2 0.524704
SURF2 surfeit 2 0.519389
RPS9 ribosomal protein S9 0.514493
DOHH deoxyhypusine hydroxylase/monooxygenase 0.513677
FXR1 fragile X mental retardation, autosomal homolog 1 0.510826
PRAMEF10 PRAME family member 10 0.507163
MIR98 microRNA 98 0.505537
RPS10 ribosomal protein S10 0.504318
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.500664
RPL36A ribosomal protein L36a 0.49742
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast) 0.4958
FXR2 fragile X mental retardation, autosomal homolog 2 0.492966
EIF4E1B eukaryotic translation initiation factor 4E family member 1B 0.487307
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 0.482064
RPL22 ribosomal protein L22 0.477636
CLCA4 chloride channel accessory 4 0.477233
CSN1S1 casein alpha s1 0.476831
CSNK1A1 casein kinase 1, alpha 1 0.475223
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.471609
RBM22 RNA binding motif protein 22 0.470406
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.469203
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.460001
EIF4A3 eukaryotic translation initiation factor 4A3 0.458006
CLCA2 chloride channel accessory 2 0.457208
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.451233
MRPS36 mitochondrial ribosomal protein S36 0.447656
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.442896
NXT1 nuclear transport factor 2-like export factor 1 0.441312
RPL39 ribosomal protein L39 0.440124
CLCA1 chloride channel accessory 1 0.439333
ZNF24 zinc finger protein 24 0.438937
RPL12 ribosomal protein L12 0.433012
IPO11 importin 11 0.429072
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.428678
GUCA2B guanylate cyclase activator 2B (uroguanylin) 0.423174
DEFA1B defensin, alpha 1B 0.421997
FLVCR1 feline leukemia virus subgroup C cellular receptor 1 0.419644
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1 0.41886
WDR12 WD repeat domain 12 0.417294
SLC38A2 solute carrier family 38, member 2 0.413382
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.410259
DEFA1 defensin, alpha 1 0.40714
RPL35 ribosomal protein L35 0.404415
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.403248
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 0.402081
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.401304
RPS27 ribosomal protein S27 0.397423
RPS16 ribosomal protein S16 0.394323
PELP1 proline, glutamate and leucine rich protein 1 0.394323
OLA1 Obg-like ATPase 1 0.390455
RPL13 ribosomal protein L13 0.390068
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 0.389682
IGHMBP2 immunoglobulin mu binding protein 2 0.385822
GRSF1 G-rich RNA sequence binding factor 1 0.384665
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.380429
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 0.380045
NOL9 nucleolar protein 9 0.378507
MRPS22 mitochondrial ribosomal protein S22 0.370833
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.370067
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.367388
LGTN ligatin 0.365859
RPS27L ribosomal protein S27-like 0.364713
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.356705
PAIP1 poly(A) binding protein interacting protein 1 0.355944
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.353282
RPS3A ribosomal protein S3A 0.347208
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 0.34645
INS insulin 0.344935
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.340773
ELF5 E74-like factor 5 (ets domain transcription factor) 0.340395
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing 0.338884
CDV3 CDV3 homolog (mouse) 0.333979
RPL8 ribosomal protein L8 0.331719
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.330213
RPL7P32 ribosomal protein L7 pseudogene 32 0.329084
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.327581
DAZAP2 DAZ associated protein 2 0.327581
RPL41 ribosomal protein L41 0.32195
RPSA ribosomal protein SA 0.318953
LPO lactoperoxidase 0.315212
SSB Sjogren syndrome antigen B (autoantigen La) 0.312971
EIF3K eukaryotic translation initiation factor 3, subunit K 0.310358
GPR162 G protein-coupled receptor 162 0.310358
RPL37 ribosomal protein L37 0.301797
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.301425
PAIP2 poly(A) binding protein interacting protein 2 0.298826
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.298455
MOV10 Mov10 RISC complex RNA helicase 0.297342
MSI1 musashi RNA-binding protein 1 0.291787
ASCC3 activating signal cointegrator 1 complex subunit 3 0.286245
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.285507
CDSN corneodesmosin 0.285507
EPRS glutamyl-prolyl-tRNA synthetase 0.285138
RPL32 ribosomal protein L32 0.283295
EIF4A2 eukaryotic translation initiation factor 4A2 0.282189
NXF1 nuclear RNA export factor 1 0.281821
SH2D3A SH2 domain containing 3A 0.281085
RPL27A ribosomal protein L27a 0.268237
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.266774
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 0.262755
AGO1 argonaute RISC catalytic component 1 0.260202
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.256925
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.254017
FBN2 fibrillin 2 0.253291
TST thiosulfate sulfurtransferase (rhodanese) 0.251476
GFM1 G elongation factor, mitochondrial 1 0.250751
LOX lysyl oxidase 0.24894
CLCN6 chloride channel, voltage-sensitive 6 0.243879
DHPS deoxyhypusine synthase 0.243879
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 0.239557
UBR1 ubiquitin protein ligase E3 component n-recognin 1 0.238837
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.237042
RPL34 ribosomal protein L34 0.231315
EME1 essential meiotic structure-specific endonuclease 1 0.231315
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 0.224913
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 0.224913
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 0.22279
HSPA4 heat shock 70kDa protein 4 0.218212
RPL6 ribosomal protein L6 0.218212
KRIT1 KRIT1, ankyrin repeat containing 0.212627
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) 0.209169
ACTB actin, beta 0.207108
RPL35A ribosomal protein L35a 0.20574
TSKU tsukushi, small leucine rich proteoglycan 0.198658
UBA2 ubiquitin-like modifier activating enzyme 2 0.195681
RPL19 ribosomal protein L19 0.194045
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.192423
CTPS1 CTP synthase 1 0.18796
ACTG1 actin gamma 1 0.18516
IFNG interferon, gamma 0.184241
VIMP VCP-interacting membrane selenoprotein 0.183328
GCDH glutaryl-CoA dehydrogenase 0.183025
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2 0.180634
EBAG9 estrogen receptor binding site associated, antigen, 9 0.177439
SPTBN1 spectrin, beta, non-erythrocytic 1 0.176305
SLC27A4 solute carrier family 27 (fatty acid transporter), member 4 0.175466
RPL7A ribosomal protein L7a 0.174911
EXOSC4 exosome component 4 0.174361
FMR1 fragile X mental retardation 1 0.174361
RNASET2 ribonuclease T2 0.173003
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.171937
TRIM25 tripartite motif containing 25 0.168847
ENY2 enhancer of yellow 2 homolog (Drosophila) 0.165
MIER1 mesoderm induction early response 1, transcriptional regulator 0.163865
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 0.162763
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 0.161693
PTBP1 polypyrimidine tract binding protein 1 0.160053
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed 0.158315
RNMT RNA (guanine-7-) methyltransferase 0.156342