cytoplasmic ribonucleoprotein granule Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A ribonucleoprotein granule located in the cytoplasm. (Gene Ontology, GO_0036464)
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Genes

94 proteins localized to the cytoplasmic ribonucleoprotein granule cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 0.03318
TDRKH tudor and KH domain containing 0.011016
EIF4E eukaryotic translation initiation factor 4E 0.011016
TDRD5 tudor domain containing 5 0.011016
PIWIL2 piwi-like RNA-mediated gene silencing 2 0.011016
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.010363
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.010363
LIN28A lin-28 homolog A (C. elegans) 0.010363
MAEL maelstrom spermatogenic transposon silencer 0.010363
TDRD1 tudor domain containing 1 0.010363
CAPRIN1 cell cycle associated protein 1 0.009969
NANOS3 nanos homolog 3 (Drosophila) 0.009969
TDRD9 tudor domain containing 9 0.009969
PIWIL4 piwi-like RNA-mediated gene silencing 4 0.009969
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.009969
ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 0.009969
TDRD7 tudor domain containing 7 0.009456
TDRD6 tudor domain containing 6 0.009456
RC3H1 ring finger and CCCH-type domains 1 0.009456
PABPC1 poly(A) binding protein, cytoplasmic 1 0.008969
PAN2 PAN2 poly(A) specific ribonuclease subunit 0.008969
WTIP Wilms tumor 1 interacting protein 0.008969
ATXN2 ataxin 2 0.008969
SQSTM1 sequestosome 1 0.008969
RBM4 RNA binding motif protein 4 0.008969
APOBEC3F apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F 0.008969
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 0.008969
BTBD1 BTB (POZ) domain containing 1 0.008969
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G 0.008969
MOV10 Mov10 RISC complex RNA helicase 0.008969
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 0.008969
CNOT1 CCR4-NOT transcription complex, subunit 1 0.008969
BTBD2 BTB (POZ) domain containing 2 0.008969
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.008969
TOP1 topoisomerase (DNA) I 0.008969
APOBEC3H apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H 0.008969
DIS3L2 DIS3 like 3'-5' exoribonuclease 2 0.008969
APOBEC3D apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D 0.008969
MBNL1 muscleblind-like splicing regulator 1 0.008969
AJUBA ajuba LIM protein 0.008969
ATXN2L ataxin 2-like 0.008969
PNRC2 proline-rich nuclear receptor coactivator 2 0.008969
ZNF66 zinc finger protein 66 0.008969
TNRC6A trinucleotide repeat containing 6A 0.008969
AGO2 argonaute RISC catalytic component 2 0.008969
TRIM21 tripartite motif containing 21 0.008969
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2 0.008969
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 0.008969
ZFP36 ZFP36 ring finger protein 0.008969
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 0.008969
PATL1 protein associated with topoisomerase II homolog 1 (yeast) 0.008969
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.008969
DCP1A decapping mRNA 1A 0.008969
LIMD1 LIM domains containing 1 0.008969
LARP4B La ribonucleoprotein domain family, member 4B 0.008969
EDC4 enhancer of mRNA decapping 4 0.008969
TRIM5 tripartite motif containing 5 0.008969
YBX1 Y box binding protein 1 0.008969
DCP2 decapping mRNA 2 0.008969
CNOT3 CCR4-NOT transcription complex, subunit 3 0.008172
GRB7 growth factor receptor-bound protein 7 0.008172
CLOCK clock circadian regulator 0.008172
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.008172
DDX25 DEAD (Asp-Glu-Ala-Asp) box helicase 25 0.008172
CNOT7 CCR4-NOT transcription complex, subunit 7 0.008172
ARNTL aryl hydrocarbon receptor nuclear translocator-like 0.008172
CARHSP1 calcium regulated heat stable protein 1, 24kDa 0.008172
PUM2 pumilio RNA-binding family member 2 0.008172
TRIM71 tripartite motif containing 71, E3 ubiquitin protein ligase 0.008172
CIRBP cold inducible RNA binding protein 0.008172
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 0.008172
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 0.008172
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 0.008172
PQBP1 polyglutamine binding protein 1 0.008172
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 0.008172
HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis) 0.008172
NANOS2 nanos homolog 2 (Drosophila) 0.008172
PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 0.008172
RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe) 0.008172
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 0.008172
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.008172
POLR2D polymerase (RNA) II (DNA directed) polypeptide D 0.007193
STAU1 staufen double-stranded RNA binding protein 1 0.007193
UHMK1 U2AF homology motif (UHM) kinase 1 0.007193
POLR2G polymerase (RNA) II (DNA directed) polypeptide G 0.007193
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 0.005908
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae) 0.005908
PATL2 protein associated with topoisomerase II homolog 2 (yeast) 0.005908
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.005908
KHSRP KH-type splicing regulatory protein 0.005908
XRN1 5'-3' exoribonuclease 1 0.005908
AGO1 argonaute RISC catalytic component 1 0.005908
AGO4 argonaute RISC catalytic component 4 0.005908
FMR1 fragile X mental retardation 1 0.005908