cultures Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

295 genes co-occuring with the biological term cultures in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
ACAN aggrecan
ACKR3 atypical chemokine receptor 3
ADA adenosine deaminase
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2
ADCY10 adenylate cyclase 10 (soluble)
ADIPOQ adiponectin, C1Q and collagen domain containing
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ANXA2 annexin A2
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
AURKA aurora kinase A
BAK1 BCL2-antagonist/killer 1
BCL2 B-cell CLL/lymphoma 2
BCL6 B-cell CLL/lymphoma 6
BDNF brain-derived neurotrophic factor
BGLAP bone gamma-carboxyglutamate (gla) protein
BLM Bloom syndrome, RecQ helicase-like
BMP2 bone morphogenetic protein 2
BMP7 bone morphogenetic protein 7
CALCA calcitonin-related polypeptide alpha
CAMP cathelicidin antimicrobial peptide
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCL2 chemokine (C-C motif) ligand 2
CCL5 chemokine (C-C motif) ligand 5
CCNB1 cyclin B1
CCND1 cyclin D1
CCR3 chemokine (C-C motif) receptor 3
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene)
CD28 CD28 molecule
CD34 CD34 molecule
CD47 CD47 molecule
CD80 CD80 molecule
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
CGA glycoprotein hormones, alpha polypeptide
CHRM1 cholinergic receptor, muscarinic 1
CHRM3 cholinergic receptor, muscarinic 3
CLN5 ceroid-lipofuscinosis, neuronal 5
CNR2 cannabinoid receptor 2 (macrophage)
COL1A1 collagen, type I, alpha 1
COL2A1 collagen, type II, alpha 1
COL3A1 collagen, type III, alpha 1
COL6A1 collagen, type VI, alpha 1
CRHR2 corticotropin releasing hormone receptor 2
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CTAG2 cancer/testis antigen 2
CTSD cathepsin D
CXCL10 chemokine (C-X-C motif) ligand 10
CXCL8 chemokine (C-X-C motif) ligand 8
CXCL9 chemokine (C-X-C motif) ligand 9
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1
CYP3A cytochrome P450, family 3, subfamily A
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4
DCN decorin
DEFB4A defensin, beta 4A
DKK1 dickkopf WNT signaling pathway inhibitor 1
DRD1 dopamine receptor D1
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
EGFR epidermal growth factor receptor
ELN elastin
EPHB2 EPH receptor B2
ERBB2 erb-b2 receptor tyrosine kinase 2
ERVW-1 endogenous retrovirus group W, member 1
ESR1 estrogen receptor 1
ESR2 estrogen receptor 2 (ER beta)
F2R coagulation factor II (thrombin) receptor
FAS Fas cell surface death receptor
FASLG Fas ligand (TNF superfamily, member 6)
FASN fatty acid synthase
FCGRT Fc fragment of IgG, receptor, transporter, alpha
FGF2 fibroblast growth factor 2 (basic)
FGF7 fibroblast growth factor 7
FGFR2 fibroblast growth factor receptor 2
FIGF c-fos induced growth factor (vascular endothelial growth factor D)
FLT4 fms-related tyrosine kinase 4
FRG2 FSHD region gene 2
GAMT guanidinoacetate N-methyltransferase
GAS6 growth arrest-specific 6
GATA4 GATA binding protein 4
GDF15 growth differentiation factor 15
GH1 growth hormone 1
GJA1 gap junction protein, alpha 1, 43kDa
GLI1 GLI family zinc finger 1
GNAS GNAS complex locus
GPNMB glycoprotein (transmembrane) nmb
GPSM2 G-protein signaling modulator 2
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D
GSTA4 glutathione S-transferase alpha 4
GSTM1 glutathione S-transferase mu 1
GSTT1 glutathione S-transferase theta 1
H2AFX H2A histone family, member X
HAS2 hyaluronan synthase 2
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HES3 hes family bHLH transcription factor 3
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HM13 histocompatibility (minor) 13
HMOX1 heme oxygenase 1
HRAS Harvey rat sarcoma viral oncogene homolog
HSF1 heat shock transcription factor 1
HSPD1 heat shock 60kDa protein 1 (chaperonin)
HTT huntingtin
IFN1@ interferon, type 1, cluster
IFNA1 interferon, alpha 1
IFNG interferon, gamma
IFNL1 interferon, lambda 1
IFNL3 interferon, lambda 3
IGF1 insulin-like growth factor 1 (somatomedin C)
IGF2 insulin-like growth factor 2
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IGFBP1 insulin-like growth factor binding protein 1
IGFBP3 insulin-like growth factor binding protein 3
IL10 interleukin 10
IL12B interleukin 12B
IL15 interleukin 15
IL17A interleukin 17A
IL18 interleukin 18
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL2RB interleukin 2 receptor, beta
IL2RG interleukin 2 receptor, gamma
IL33 interleukin 33
IL6 interleukin 6
IL6ST interleukin 6 signal transducer
INHBA inhibin, beta A
ITGAV integrin, alpha V
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
KDM8 lysine (K)-specific demethylase 8
KITLG KIT ligand
KLRD1 killer cell lectin-like receptor subfamily D, member 1
KRT14 keratin 14, type I
KRT5 keratin 5, type II
LAMA5 laminin, alpha 5
LAMC1 laminin, gamma 1 (formerly LAMB2)
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LEPQTL1 Leptin, serum levels of
LEPR leptin receptor
LIF leukemia inhibitory factor
LMNA lamin A/C
LOX lysyl oxidase
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPK8 mitogen-activated protein kinase 8
MAPT microtubule-associated protein tau
MECP2 methyl CpG binding protein 2
MET MET proto-oncogene, receptor tyrosine kinase
MIR15A microRNA 15a
MIR16-1 microRNA 16-1
MIR200C microRNA 200c
MIR210 microRNA 210
MIR483 microRNA 483
MKI67 marker of proliferation Ki-67
MLANA melan-A
MMP1 matrix metallopeptidase 1
MMP13 matrix metallopeptidase 13
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MMP7 matrix metallopeptidase 7
MMP8 matrix metallopeptidase 8
MMP9 matrix metallopeptidase 9
MUC1 mucin 1, cell surface associated
MUC2 mucin 2, oligomeric mucus/gel-forming
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYO5B myosin VB
MYOC myocilin, trabecular meshwork inducible glucocorticoid response
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
NACA nascent polypeptide-associated complex alpha subunit
NCAM1 neural cell adhesion molecule 1
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NGF nerve growth factor (beta polypeptide)
NGFR nerve growth factor receptor
NKX2-5 NK2 homeobox 5
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR4A2 nuclear receptor subfamily 4, group A, member 2
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NRG1 neuregulin 1
OCLN occludin
OLIG2 oligodendrocyte lineage transcription factor 2
OPTN optineurin
OSM oncostatin M
OTX2 orthodenticle homeobox 2
OXTR oxytocin receptor
PALLD palladin, cytoskeletal associated protein
PARK2 parkin RBR E3 ubiquitin protein ligase
PAX6 paired box 6
PCNA proliferating cell nuclear antigen
PDGFRB platelet-derived growth factor receptor, beta polypeptide
PGR progesterone receptor
PITX2 paired-like homeodomain 2
PITX3 paired-like homeodomain 3
PLK1 polo-like kinase 1
PON1 paraoxonase 1
PON2 paraoxonase 2
PON3 paraoxonase 3
POU5F1 POU class 5 homeobox 1
PPARG peroxisome proliferator-activated receptor gamma
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PROM1 prominin 1
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa
PTGER4 prostaglandin E receptor 4 (subtype EP4)
PTHLH parathyroid hormone-like hormone
PTX3 pentraxin 3, long
PVR poliovirus receptor
PYGM phosphorylase, glycogen, muscle
RAI14 retinoic acid induced 14
RBL2 retinoblastoma-like 2
RECK reversion-inducing-cysteine-rich protein with kazal motifs
RET ret proto-oncogene
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
RUNX2 runt-related transcription factor 2
S100A1 S100 calcium binding protein A1
S100B S100 calcium binding protein B
SCGB2A2 secretoglobin, family 2A, member 2
SEC31A SEC31 homolog A (S. cerevisiae)
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERTAD1 SERTA domain containing 1
SHBG sex hormone-binding globulin
SHH sonic hedgehog
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC38A3 solute carrier family 38, member 3
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SLIT1 slit homolog 1 (Drosophila)
SLIT2 slit homolog 2 (Drosophila)
SLIT3 slit homolog 3 (Drosophila)
SMAD1 SMAD family member 1
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMN1 survival of motor neuron 1, telomeric
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SOD1 superoxide dismutase 1, soluble
SOST sclerostin
SOX2 SRY (sex determining region Y)-box 2
SP1 Sp1 transcription factor
SPP1 secreted phosphoprotein 1
SQSTM1 sequestosome 1
SREBF1 sterol regulatory element binding transcription factor 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
SULT2B1 sulfotransferase family, cytosolic, 2B, member 1
SYNM synemin, intermediate filament protein
TDG thymine-DNA glycosylase
TERT telomerase reverse transcriptase
TGFB1 transforming growth factor, beta 1
TGM1 transglutaminase 1
THPO thrombopoietin
THY1 Thy-1 cell surface antigen
TIMP1 TIMP metallopeptidase inhibitor 1
TIMP2 TIMP metallopeptidase inhibitor 2
TLR3 toll-like receptor 3
TLR7 toll-like receptor 7
TLR9 toll-like receptor 9
TNC tenascin C
TNF tumor necrosis factor
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TP53 tumor protein p53
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TXNIP thioredoxin interacting protein
VEGFA vascular endothelial growth factor A
WASF2 WAS protein family, member 2
WDR36 WD repeat domain 36
WNT7A wingless-type MMTV integration site family, member 7A
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase