culture fluid Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The liquid culture medium, obtained after filtration of the cell culture. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002233)
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Genes

175 proteins co-occuring with the tissue culture fluid in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
PLG plasminogen 1.33862
OR6B1 olfactory receptor, family 6, subfamily B, member 1 1.18601
ERVW-1 endogenous retrovirus group W, member 1 1.14609
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1.02951
IFNA1 interferon, alpha 1 1.01287
ERF Ets2 repressor factor 0.981518
CSN1S1 casein alpha s1 0.978917
TNF tumor necrosis factor 0.945226
IL1A interleukin 1, alpha 0.933195
ENGASE endo-beta-N-acetylglucosaminidase 0.930193
IL2 interleukin 2 0.903701
PLAT plasminogen activator, tissue 0.869794
SH2D3A SH2 domain containing 3A 0.863048
MIR1273D microRNA 1273d 0.847484
LYZ lysozyme 0.846644
RPS21 ribosomal protein S21 0.843286
GGACT gamma-glutamylamine cyclotransferase 0.832804
LACTB lactamase, beta 0.829453
MED28 mediator complex subunit 28 0.829453
ALB albumin 0.815233
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) 0.801459
INTS1 integrator complex subunit 1 0.796041
KRT32 keratin 32, type I 0.792709
ZNF17 zinc finger protein 17 0.791044
IL1B interleukin 1, beta 0.783972
ZNF347 zinc finger protein 347 0.778155
CCL2 chemokine (C-C motif) ligand 2 0.757845
TGFB1 transforming growth factor, beta 1 0.75495
HSFX2 heat shock transcription factor family, X linked 2 0.749992
HSFX1 heat shock transcription factor family, X linked 1 0.749992
PI3 peptidase inhibitor 3, skin-derived 0.743389
CENPV centromere protein V 0.738854
MST1 macrophage stimulating 1 0.716241
CD4 CD4 molecule 0.67984
NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1 0.677803
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.668436
AFP alpha-fetoprotein 0.655024
MMP1 matrix metallopeptidase 1 0.63638
INMT indolethylamine N-methyltransferase 0.62385
RNASEH2A ribonuclease H2, subunit A 0.615377
ICT1 immature colon carcinoma transcript 1 0.61175
TPSAB1 tryptase alpha/beta 1 0.608124
GML glycosylphosphatidylinositol anchored molecule like 0.596058
IFNG interferon, gamma 0.595255
DCAF7 DDB1 and CUL4 associated factor 7 0.590839
CCDC85B coiled-coil domain containing 85B 0.590036
MMP9 matrix metallopeptidase 9 0.589234
TIMP1 TIMP metallopeptidase inhibitor 1 0.583621
NBPF8 neuroblastoma breakpoint family, member 8 0.575616
MAN2A1 mannosidase, alpha, class 2A, member 1 0.571219
MANBA mannosidase, beta A, lysosomal 0.57042
ALPPL2 alkaline phosphatase, placental-like 2 0.56005
ALPL alkaline phosphatase, liver/bone/kidney 0.559254
ALPP alkaline phosphatase, placental 0.558457
IL6 interleukin 6 0.552888
NBPF10 neuroblastoma breakpoint family, member 10 0.550106
SCO1 SCO1 cytochrome c oxidase assembly protein 0.545739
PMEPA1 prostate transmembrane protein, androgen induced 1 0.537812
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.536625
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1 0.535833
ZMPSTE24 zinc metallopeptidase STE24 0.516104
CFI complement factor I 0.51571
BRD3 bromodomain containing 3 0.512171
PRM1 protamine 1 0.507849
EFHC1 EF-hand domain (C-terminal) containing 1 0.494136
IL12RB2 interleukin 12 receptor, beta 2 0.487106
HAUS3 HAUS augmin-like complex, subunit 3 0.485156
PPA1 pyrophosphatase (inorganic) 1 0.478145
CAMKV CaM kinase-like vesicle-associated 0.476589
CD79A CD79a molecule, immunoglobulin-associated alpha 0.467273
GLB1 galactosidase, beta 1 0.461852
IFNB1 interferon, beta 1, fibroblast 0.461078
ACO2 aconitase 2, mitochondrial 0.459532
SERPINF2 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 0.447961
CTRB2 chymotrypsinogen B2 0.444115
PRSS58 protease, serine, 58 0.441042
AKAP13 A kinase (PRKA) anchor protein 13 0.440658
TTL tubulin tyrosine ligase 0.439123
CACNA2D4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 0.437589
CTRB1 chymotrypsinogen B1 0.428018
PLAU plasminogen activator, urokinase 0.427636
FRZB frizzled-related protein 0.418861
ANXA5 annexin A5 0.418861
DNA2 DNA replication helicase/nuclease 2 0.418099
MOCS2 molybdenum cofactor synthesis 2 0.409351
ELANE elastase, neutrophil expressed 0.407073
TIMP2 TIMP metallopeptidase inhibitor 2 0.402523
F8 coagulation factor VIII, procoagulant component 0.400628
SERPINA4 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 0.399492
KRT84 keratin 84, type II 0.3976
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 0.394197
ATF5 activating transcription factor 5 0.387404
VIL1 villin 1 0.38552
TGFBI transforming growth factor, beta-induced, 68kDa 0.381379
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.381379
ACPP acid phosphatase, prostate 0.380627
CAT catalase 0.377621
INF2 inverted formin, FH2 and WH2 domain containing 0.375743
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.374993
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.373868
LECT2 leukocyte cell-derived chemotaxin 2 0.373868
IL1RN interleukin 1 receptor antagonist 0.371994
ATXN3 ataxin 3 0.370121
GGPS1 geranylgeranyl diphosphate synthase 1 0.370121
PGRMC2 progesterone receptor membrane component 2 0.368624
GPI glucose-6-phosphate isomerase 0.36825
MMP13 matrix metallopeptidase 13 0.367876
HBB hemoglobin, beta 0.366754
CCL13 chemokine (C-C motif) ligand 13 0.363766
CAV2 caveolin 2 0.361155
CXCL8 chemokine (C-X-C motif) ligand 8 0.359292
MLN motilin 0.351485
MGAT4C MGAT4 family, member C 0.350743
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 0.344818
LGALS7 lectin, galactoside-binding, soluble, 7 0.344079
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 0.340388
CPD carboxypeptidase D 0.338545
NT5C2 5'-nucleotidase, cytosolic II 0.337808
ZMYND10 zinc finger, MYND-type containing 10 0.336704
SOCS2 suppressor of cytokine signaling 2 0.333028
IGHV3-30 immunoglobulin heavy variable 3-30 0.330827
CTSG cathepsin G 0.320956
FURIN furin (paired basic amino acid cleaving enzyme) 0.320591
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 0.320591
MGAM maltase-glucoamylase 0.315135
FN1 fibronectin 1 0.31187
SH2D3C SH2 domain containing 3C 0.309697
SOD2 superoxide dismutase 2, mitochondrial 0.309335
THY1 Thy-1 cell surface antigen 0.308974
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.305722
TPI1 triosephosphate isomerase 1 0.305001
GABARAP GABA(A) receptor-associated protein 0.303919
IL4 interleukin 4 0.303559
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.303198
PTH parathyroid hormone 0.295655
NELFCD negative elongation factor complex member C/D 0.291365
INS insulin 0.28887
SRPR signal recognition particle receptor (docking protein) 0.288158
EXO1 exonuclease 1 0.283545
HEXDC hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing 0.28107
ROM1 retinal outer segment membrane protein 1 0.278603
HBD hemoglobin, delta 0.276495
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) 0.275794
GALE UDP-galactose-4-epimerase 0.274744
SLPI secretory leukocyte peptidase inhibitor 0.274744
CHIA chitinase, acidic 0.273696
AK2 adenylate kinase 2 0.270214
MBP myelin basic protein 0.269521
C5ORF38 chromosome 5 open reading frame 38 0.267102
PNLIP pancreatic lipase 0.264011
PROS1 protein S (alpha) 0.258917
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) 0.256234
LSR lipolysis stimulated lipoprotein receptor 0.253578
S100A2 S100 calcium binding protein A2 0.253248
UNC5B unc-5 homolog B (C. elegans) 0.252919
CCL3 chemokine (C-C motif) ligand 3 0.252919
BLVRA biliverdin reductase A 0.251279
TSPO translocator protein (18kDa) 0.250627
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.250301
TF transferrin 0.244545
DHFR dihydrofolate reductase 0.242672
KCNJ13 potassium channel, inwardly rectifying subfamily J, member 13 0.23961
IL10 interleukin 10 0.236921
SDCBP syndecan binding protein (syntenin) 0.233162
ACTB actin, beta 0.232599
DCPS decapping enzyme, scavenger 0.230931
SNHG12 small nucleolar RNA host gene 12 0.227707
ACSS2 acyl-CoA synthetase short-chain family member 2 0.227445
CFH complement factor H 0.226155
METTL13 methyltransferase like 13 0.224398
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 0.222224
CA5B carbonic anhydrase VB, mitochondrial 0.221989
ACTG1 actin gamma 1 0.220378
TSKU tsukushi, small leucine rich proteoglycan 0.216933
UTS2R urotensin 2 receptor 0.213471