copi vesicle coat Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. (Gene Ontology, GO_0030126)
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Genes

145 proteins co-occuring with the copi vesicle coat cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ARF1 ADP-ribosylation factor 1 2.37879
COPE coatomer protein complex, subunit epsilon 2.13695
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 1.98408
ARFGAP2 ADP-ribosylation factor GTPase activating protein 2 1.55878
CDKN2A cyclin-dependent kinase inhibitor 2A 1.42429
COPA coatomer protein complex, subunit alpha 1.35649
ARF3 ADP-ribosylation factor 3 1.20086
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 1.17927
RAB1B RAB1B, member RAS oncogene family 1.07663
COPB1 coatomer protein complex, subunit beta 1 1.05539
RAP2B RAP2B, member of RAS oncogene family 1.04431
SAR1A secretion associated, Ras related GTPase 1A 1.03529
SEC24D SEC24 family member D 1.03129
COPG2 coatomer protein complex, subunit gamma 2 1.0248
COPZ2 coatomer protein complex, subunit zeta 2 1.0109
GOLPH3 golgi phosphoprotein 3 (coat-protein) 1.0035
ANXA4 annexin A4 0.954483
ARF4 ADP-ribosylation factor 4 0.945907
BATF2 basic leucine zipper transcription factor, ATF-like 2 0.938322
ARFIP1 ADP-ribosylation factor interacting protein 1 0.872726
CYTH1 cytohesin 1 0.872266
TMED2 transmembrane emp24 domain trafficking protein 2 0.868126
COPZ1 coatomer protein complex, subunit zeta 1 0.865826
SLC35F1 solute carrier family 35, member F1 0.832302
STPG1 sperm-tail PG-rich repeat containing 1 0.818993
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.81257
SEC13 SEC13 homolog (S. cerevisiae) 0.793771
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.786444
RAB2A RAB2A, member RAS oncogene family 0.785071
LMAN1 lectin, mannose-binding, 1 0.780497
KCNK3 potassium channel, two pore domain subfamily K, member 3 0.775928
SEC24B SEC24 family member B 0.754983
SCYL1 SCY1-like 1 (S. cerevisiae) 0.746381
NSF N-ethylmaleimide-sensitive factor 0.744574
PLD1 phospholipase D1, phosphatidylcholine-specific 0.742769
PEX11B peroxisomal biogenesis factor 11 beta 0.741867
ARF5 ADP-ribosylation factor 5 0.740965
ARCN1 archain 1 0.692955
SEH1L SEH1-like (S. cerevisiae) 0.69164
SEC24C SEC24 family member C 0.68639
NUP85 nucleoporin 85kDa 0.683771
SEC23A Sec23 homolog A (S. cerevisiae) 0.667693
GPR15 G protein-coupled receptor 15 0.664232
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 0.65259
ADAR adenosine deaminase, RNA-specific 0.648721
LMAN2 lectin, mannose-binding 2 0.628187
NCDN neurochondrin 0.619255
PI4KA phosphatidylinositol 4-kinase, catalytic, alpha 0.608241
CTAGE5 CTAGE family, member 5 0.594332
AZIN1 antizyme inhibitor 1 0.566338
CAPN8 calpain 8 0.560114
KCNK9 potassium channel, two pore domain subfamily K, member 9 0.558871
RAB1A RAB1A, member RAS oncogene family 0.539883
NUP133 nucleoporin 133kDa 0.536183
ARF6 ADP-ribosylation factor 6 0.535361
PDE4C phosphodiesterase 4C, cAMP-specific 0.51694
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.503506
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.500258
WDR36 WD repeat domain 36 0.493371
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 0.488519
NUP37 nucleoporin 37kDa 0.486904
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 0.485289
HELB helicase (DNA) B 0.484886
KLC2 kinesin light chain 2 0.471609
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 0.468401
COPG1 coatomer protein complex, subunit gamma 1 0.463598
CDC42 cell division cycle 42 0.460001
CDK13 cyclin-dependent kinase 13 0.457606
FLNB filamin B, beta 0.454816
RDH5 retinol dehydrogenase 5 (11-cis/9-cis) 0.444878
MIA3 melanoma inhibitory activity family, member 3 0.442104
AP2S1 adaptor-related protein complex 2, sigma 1 subunit 0.440916
PLIN3 perilipin 3 0.427497
AP1S1 adaptor-related protein complex 1, sigma 1 subunit 0.421604
SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 0.396648
RFK riboflavin kinase 0.394323
NUP107 nucleoporin 107kDa 0.393162
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma 0.392388
TGOLN2 trans-golgi network protein 2 0.388909
ARFRP1 ADP-ribosylation factor related protein 1 0.388909
EDF1 endothelial differentiation-related factor 1 0.383895
KLC3 kinesin light chain 3 0.376586
VAMP7 vesicle-associated membrane protein 7 0.355183
STX17 syntaxin 17 0.343042
MAP9 microtubule-associated protein 9 0.341529
PNPLA2 patatin-like phospholipase domain containing 2 0.341151
BET1 Bet1 golgi vesicular membrane trafficking protein 0.333602
SCFD1 sec1 family domain containing 1 0.330966
TRIM32 tripartite motif containing 32 0.326453
RGS19 regulator of G-protein signaling 19 0.320451
DBNL drebrin-like 0.315586
PMP2 peripheral myelin protein 2 0.308122
BICD2 bicaudal D homolog 2 (Drosophila) 0.306632
GOSR2 golgi SNAP receptor complex member 2 0.29994
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 0.299569
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 0.292527
ACE angiotensin I converting enzyme 0.289199
DBN1 drebrin 1 0.287721
RPL19 ribosomal protein L19 0.285876
PDE4B phosphodiesterase 4B, cAMP-specific 0.277406
DRD3 dopamine receptor D3 0.275936
KIF5C kinesin family member 5C 0.267505
GOLGA3 golgin A3 0.266774
TAPBP TAP binding protein (tapasin) 0.266042
DMRT1 doublesex and mab-3 related transcription factor 1 0.263485
SCG3 secretogranin III 0.26239
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 0.26239
RAB6A RAB6A, member RAS oncogene family 0.255107
PLIN2 perilipin 2 0.247492
NUP153 nucleoporin 153kDa 0.238119
AHRR aryl-hydrocarbon receptor repressor 0.234891
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) 0.230245
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.227397
CAND1 cullin-associated and neddylation-dissociated 1 0.222083
RER1 retention in endoplasmic reticulum sorting receptor 1 0.21716
GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 0.21646
SCARF1 scavenger receptor class F, member 1 0.216111
PGAM2 phosphoglycerate mutase 2 (muscle) 0.212627
NCS1 neuronal calcium sensor 1 0.210549
MRS2 MRS2 magnesium transporter 0.208825
RAB13 RAB13, member RAS oncogene family 0.203022
SREBF2 sterol regulatory element binding transcription factor 2 0.200663
PDE4D phosphodiesterase 4D, cAMP-specific 0.196669
ARHGAP21 Rho GTPase activating protein 21 0.194698
RASD1 RAS, dexamethasone-induced 1 0.194045
TFR2 transferrin receptor 2 0.191777
CANX calnexin 0.190175
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 0.190175
BICD1 bicaudal D homolog 1 (Drosophila) 0.190175
CCNE1 cyclin E1 0.189222
FOXL2 forkhead box L2 0.187333
BPGM 2,3-bisphosphoglycerate mutase 0.183631
PGAM1 phosphoglycerate mutase 1 (brain) 0.182422
ERP29 endoplasmic reticulum protein 29 0.177439
KLRC3 killer cell lectin-like receptor subfamily C, member 3 0.175188
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 0.174911
FIG4 FIG4 phosphoinositide 5-phosphatase 0.172201
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.171673
PEX3 peroxisomal biogenesis factor 3 0.171673
TPPP tubulin polymerization promoting protein 0.171149
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.168598
OCRL oculocerebrorenal syndrome of Lowe 0.166884
NPEPPS aminopeptidase puromycin sensitive 0.166167
SCAP SREBF chaperone 0.164315
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.162117