contact site Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Sites of close apposition of the inner and outer mitochondrial membrane. (Gene Ontology, GO_0044289)
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Genes

240 proteins co-occuring with the contact site cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HK1 hexokinase 1 1.1148
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 1.03129
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 0.958789
VCL vinculin 0.925135
OSBP oxysterol binding protein 0.90832
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) 0.893018
CIDEC cell death-inducing DFFA-like effector c 0.742769
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.724812
PPIF peptidylprolyl isomerase F 0.724365
LCK LCK proto-oncogene, Src family tyrosine kinase 0.709693
TEC tec protein tyrosine kinase 0.689013
TRBJ2-5 T cell receptor beta joining 2-5 0.671593
CD4 CD4 molecule 0.664664
FN1 fibronectin 1 0.65388
PISD phosphatidylserine decarboxylase 0.64915
PMPCA peptidase (mitochondrial processing) alpha 0.647862
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 0.616285
TRMT61B tRNA methyltransferase 61B 0.615861
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.615437
IMMT inner membrane protein, mitochondrial 0.609509
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.598538
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.585523
NCAM1 neural cell adhesion molecule 1 0.580086
ITK IL2-inducible T-cell kinase 0.570496
FSHR follicle stimulating hormone receptor 0.566754
OSBPL3 oxysterol binding protein-like 3 0.562187
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11 0.562187
MYO9B myosin IXB 0.560114
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.554318
TBC1D10C TBC1 domain family, member 10C 0.550186
GJA1 gap junction protein, alpha 1, 43kDa 0.548122
GTF2B general transcription factor IIB 0.513677
CADM3 cell adhesion molecule 3 0.512455
OSBPL1A oxysterol binding protein-like 1A 0.510418
APOOL apolipoprotein O-like 0.50635
NLRP2 NLR family, pyrin domain containing 2 0.502288
MAP4K1 mitogen-activated protein kinase kinase kinase kinase 1 0.499447
SUOX sulfite oxidase 0.499042
CDR2 cerebellar degeneration-related protein 2, 62kDa 0.497826
HLA-A major histocompatibility complex, class I, A 0.492966
BAX BCL2-associated X protein 0.477636
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 0.476429
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 0.475625
PCDH19 protocadherin 19 0.4672
ACBD3 acyl-CoA binding domain containing 3 0.463997
STAR steroidogenic acute regulatory protein 0.461199
LHCGR luteinizing hormone/choriogonadotropin receptor 0.460401
MBP myelin basic protein 0.460001
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.455613
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae) 0.454816
CDC42 cell division cycle 42 0.45004
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 0.448054
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.446862
GK glycerol kinase 0.440916
ICAM1 intercellular adhesion molecule 1 0.438542
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.437751
TRMT61A tRNA methyltransferase 61A 0.437751
SH2D5 SH2 domain containing 5 0.43696
LYZ lysozyme 0.433012
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.432224
TSPO translocator protein (18kDa) 0.427891
ATAD3A ATPase family, AAA domain containing 3A 0.426318
MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 0.420428
RHO rhodopsin 0.420428
DENND1C DENN/MADD domain containing 1C 0.419644
CD247 CD247 molecule 0.418077
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 0.417685
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.408699
APOO apolipoprotein O 0.401693
TJP1 tight junction protein 1 0.401304
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 0.397811
KCNIP3 Kv channel interacting protein 3, calsenilin 0.395485
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.391615
CKMT1B creatine kinase, mitochondrial 1B 0.389682
VAV1 vav 1 guanine nucleotide exchange factor 0.388523
HLA-C major histocompatibility complex, class I, C 0.385051
PROS1 protein S (alpha) 0.382739
PLVAP plasmalemma vesicle associated protein 0.381969
JUP junction plakoglobin 0.381584
OSBPL2 oxysterol binding protein-like 2 0.381199
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 0.379276
PCDH17 protocadherin 17 0.370833
KLHL20 kelch-like family member 20 0.370067
KLRK1 killer cell lectin-like receptor subfamily K, member 1 0.367771
TRAC T cell receptor alpha constant 0.358228
CTTN cortactin 0.353662
CMC1 C-x(9)-C motif containing 1 0.351002
IQGAP1 IQ motif containing GTPase activating protein 1 0.34645
SAMM50 SAMM50 sorting and assembly machinery component 0.346071
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.345314
GUCA1A guanylate cyclase activator 1A (retina) 0.344556
CLNK cytokine-dependent hematopoietic cell linker 0.343799
CADM4 cell adhesion molecule 4 0.341529
LAT linker for activation of T cells 0.337751
BCL2L1 BCL2-like 1 0.336996
PLEK pleckstrin 0.335864
TMSB4X thymosin beta 4, X-linked 0.332472
ESYT2 extended synaptotagmin-like protein 2 0.331719
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.330213
CLCF1 cardiotrophin-like cytokine factor 1 0.329837
RAB35 RAB35, member RAS oncogene family 0.327581
FSD1 fibronectin type III and SPRY domain containing 1 0.326078
TPI1 triosephosphate isomerase 1 0.325327
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.324951
OCLN occludin 0.320451
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 0.317082
ERVW-1 endogenous retrovirus group W, member 1 0.315212
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.312597
OSBPL10 oxysterol binding protein-like 10 0.312597
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.311105
RAB13 RAB13, member RAS oncogene family 0.310358
NUP88 nucleoporin 88kDa 0.307749
POLR1D polymerase (RNA) I polypeptide D, 16kDa 0.307749
CD2AP CD2-associated protein 0.307377
GTF3A general transcription factor IIIA 0.307004
AMICA1 adhesion molecule, interacts with CXADR antigen 1 0.305888
PTK2B protein tyrosine kinase 2 beta 0.305515
MESDC2 mesoderm development candidate 2 0.302912
CD300LF CD300 molecule-like family member f 0.30254
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 0.300682
ERI1 exoribonuclease 1 0.298826
APLP1 amyloid beta (A4) precursor-like protein 1 0.294007
CNTN2 contactin 2 (axonal) 0.293637
ANXA2 annexin A2 0.293267
PTBP3 polypyrimidine tract binding protein 3 0.28846
LIMS2 LIM and senescent cell antigen-like domains 2 0.285876
VIPR1 vasoactive intestinal peptide receptor 1 0.285876
CD151 CD151 molecule (Raph blood group) 0.285507
DSP desmoplakin 0.279245
EPGN epithelial mitogen 0.278141
LIMS3 LIM and senescent cell antigen-like domains 3 0.277774
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 0.277038
PRF1 perforin 1 (pore forming protein) 0.276671
HEPACAM hepatic and glial cell adhesion molecule 0.275569
PLCH2 phospholipase C, eta 2 0.275569
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.273734
OSBP2 oxysterol binding protein 2 0.271533
PTH2R parathyroid hormone 2 receptor 0.269701
ATAD3C ATPase family, AAA domain containing 3C 0.266774
CKMT1A creatine kinase, mitochondrial 1A 0.26385
WDR11 WD repeat domain 11 0.26239
MSMB microseminoprotein, beta- 0.262025
XIRP1 xin actin binding repeat containing 1 0.259473
LOXL1 lysyl oxidase-like 1 0.258745
APLP2 amyloid beta (A4) precursor-like protein 2 0.258381
HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 0.254743
STPG1 sperm-tail PG-rich repeat containing 1 0.253653
HSPA14 heat shock 70kDa protein 14 0.252202
PXN paxillin 0.249664
SEBOX SEBOX homeobox 0.247492
TNC tenascin C 0.245323
FAM134B family with sequence similarity 134, member B 0.244962
OSBPL8 oxysterol binding protein-like 8 0.244962
SELL selectin L 0.240636
POLR2G polymerase (RNA) II (DNA directed) polypeptide G 0.240276
FGFRL1 fibroblast growth factor receptor-like 1 0.238837
RPL18 ribosomal protein L18 0.238119
INSR insulin receptor 0.237401
CHRM2 cholinergic receptor, muscarinic 2 0.234891
CELF2 CUGBP, Elav-like family member 2 0.234174
ADRA2A adrenoceptor alpha 2A 0.233101
DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 0.232744
PALM paralemmin 0.231315
ILK integrin-linked kinase 0.230958
FYN FYN proto-oncogene, Src family tyrosine kinase 0.228108
CGN cingulin 0.22279
HK2 hexokinase 2 0.22173
HLA-E major histocompatibility complex, class I, E 0.22173
CHURC1 churchill domain containing 1 0.221378
ADCY2 adenylate cyclase 2 (brain) 0.219617
XIRP2 xin actin binding repeat containing 2 0.219265
CHRM3 cholinergic receptor, muscarinic 3 0.21681
IL31 interleukin 31 0.215761
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.213322
HLA-B major histocompatibility complex, class I, B 0.212974
LCN1 lipocalin 1 0.207794
CKMT2 creatine kinase, mitochondrial 2 (sarcomeric) 0.206766
STX4 syntaxin 4 0.206423
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 0.206082
PRNP prion protein 0.206082
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1 0.205399
VASP vasodilator-stimulated phosphoprotein 0.203361
LILRB1 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 0.203022
IGHV4-39 immunoglobulin heavy variable 4-39 0.203022
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 0.203022
CALD1 caldesmon 1 0.198991
HIST2H2AC histone cluster 2, H2ac 0.198325
HIST2H2AA4 histone cluster 2, H2aa4 0.197993
HIST2H2AA3 histone cluster 2, H2aa3 0.197993
CKB creatine kinase, brain 0.195025
CXADR coxsackie virus and adenovirus receptor 0.194371
DOCK11 dedicator of cytokinesis 11 0.1921
ULBP2 UL16 binding protein 2 0.188905
HLA-F major histocompatibility complex, class I, F 0.188905
HCG4P11 HLA complex group 4 pseudogene 11 0.188905
RPL35 ribosomal protein L35 0.187333
PLAU plasminogen activator, urokinase 0.18702
VDAC1 voltage-dependent anion channel 1 0.183025
RAPSN receptor-associated protein of the synapse 0.181823
MADD MAP-kinase activating death domain 0.181823
CD2 CD2 molecule 0.181823
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 0.180634
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.180339
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 0.179752
GSN gelsolin 0.178877
JMY junction mediating and regulatory protein, p53 cofactor 0.178588
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 0.176587
ATG10 autophagy related 10 0.176305
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.176024
GSTA3 glutathione S-transferase alpha 3 0.174361
CLDN5 claudin 5 0.174087
LILRP1 leukocyte immunoglobulin-like receptor pseudogene 1 0.173814
NTM neurotrimin 0.173543
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1) 0.173273
COTL1 coactosin-like F-actin binding protein 1 0.173273
GSTA2 glutathione S-transferase alpha 2 0.173273
IL6 interleukin 6 0.173273
GSTA4 glutathione S-transferase alpha 4 0.173003
GSTM2 glutathione S-transferase mu 2 (muscle) 0.171937
GSTA1 glutathione S-transferase alpha 1 0.171673
MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) 0.170888
CD200R1 CD200 receptor 1 0.170371
SKA1 spindle and kinetochore associated complex subunit 1 0.169604
KLHL2 kelch-like family member 2 0.168847
DCTD dCMP deaminase 0.168101
KLRC2 killer cell lectin-like receptor subfamily C, member 2 0.168101
IGHV3-9 immunoglobulin heavy variable 3-9 0.167611
PTPRM protein tyrosine phosphatase, receptor type, M 0.166643
IGHV5-51 immunoglobulin heavy variable 5-51 0.163865
OMA1 OMA1 zinc metallopeptidase 0.16233
BTF3 basic transcription factor 3 0.161905
NCKAP1 NCK-associated protein 1 0.161068
CD63 CD63 molecule 0.160254
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.160254
RERE arginine-glutamic acid dipeptide (RE) repeats 0.159268
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.158882
MFN2 mitofusin 2 0.157039
FNDC3A fibronectin type III domain containing 3A 0.156688
NXN nucleoredoxin 0.156513
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.156342