collecting duct carcinoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description Collecting duct carcinoma is a renal cell carcinoma described as a rare and aggressive type of renal cell carcinoma. The cancerous cells form irregular tubes inside the tumor. Collecting duct carcinoma is more common among young people and unfortunately is diagnosed in most cases when the cancer has metastasized (spread inside the body). (Human Disease Ontology, DOID_4464)
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Genes

53 genes co-occuring with the disease collecting duct carcinoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 1.54937
PAX8 paired box 8 1.27301
TPD52L2 tumor protein D52-like 2 1.22128
KRT7 keratin 7, type II 1.18971
VCL vinculin 1.04882
TPD52L1 tumor protein D52-like 1 1.03788
FH fumarate hydratase 0.993174
TFE3 transcription factor binding to IGHM enhancer 3 0.982215
TFEB transcription factor EB 0.977165
AMACR alpha-methylacyl-CoA racemase 0.922561
GATA3 GATA binding protein 3 0.908553
PAX2 paired box 2 0.888848
LZTS1 leucine zipper, putative tumor suppressor 1 0.869596
TPM4 tropomyosin 4 0.859771
CDH16 cadherin 16, KSP-cadherin 0.856087
STK10 serine/threonine kinase 10 0.848307
ZNF135 zinc finger protein 135 0.791721
KRT20 keratin 20, type I 0.728143
KLF10 Kruppel-like factor 10 0.670333
MECOM MDS1 and EVI1 complex locus 0.639463
CA9 carbonic anhydrase IX 0.577716
PVALB parvalbumin 0.570329
CLTC clathrin, heavy chain (Hc) 0.555956
DNM2 dynamin 2 0.545481
KRT34 keratin 34, type I 0.54393
PTER phosphotriesterase related 0.542767
KRT8 keratin 8, type II 0.534248
ALK anaplastic lymphoma receptor tyrosine kinase 0.507657
MKI67 marker of proliferation Ki-67 0.507273
OCRL oculocerebrorenal syndrome of Lowe 0.498849
POLI polymerase (DNA directed) iota 0.493503
RCC1 regulator of chromosome condensation 1 0.486266
TPM3 tropomyosin 3 0.484744
KRT19 keratin 19, type I 0.481325
KRT5 keratin 5, type II 0.460129
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.385565
LATS1 large tumor suppressor kinase 1 0.383708
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.382223
MET MET proto-oncogene, receptor tyrosine kinase 0.352291
EML4 echinoderm microtubule associated protein like 4 0.351923
TICAM2 toll-like receptor adaptor molecule 2 0.343106
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.335046
TP53 tumor protein p53 0.316092
CD9 CD9 molecule 0.291539
HLA-G major histocompatibility complex, class I, G 0.267977
VIM vimentin 0.254536
KITLG KIT ligand 0.238403
PDPN podoplanin 0.215992
IL2 interleukin 2 0.201962
FHIT fragile histidine triad 0.198064
NKX2-1 NK2 homeobox 1 0.177851
ERBB2 erb-b2 receptor tyrosine kinase 2 0.163317
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.163111