collagen binding Gene Set

Dataset GO Molecular Function Annotations
Category structural or functional annotations
Type molecular function
Description Interacting selectively and non-covalently with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). (Gene Ontology, GO_0005518)
External Link http://amigo.geneontology.org/amigo/term/GO:0005518
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Genes

63 genes performing the collagen binding molecular function from the curated GO Molecular Function Annotations dataset.

Symbol Name
ABI3BP ABI family, member 3 (NESH) binding protein
ACHE acetylcholinesterase (Yt blood group)
ADAM9 ADAM metallopeptidase domain 9
ADGRG1 adhesion G protein-coupled receptor G1
ANTXR1 anthrax toxin receptor 1
ASPN asporin
C1QTNF1 C1q and tumor necrosis factor related protein 1
C6ORF15 chromosome 6 open reading frame 15
CCBE1 collagen and calcium binding EGF domains 1
CD44 CD44 molecule (Indian blood group)
COCH cochlin
COL14A1 collagen, type XIV, alpha 1
COL5A3 collagen, type V, alpha 3
COMP cartilage oligomeric matrix protein
CTSB cathepsin B
CTSK cathepsin K
CTSL cathepsin L
CTSS cathepsin S
DCN decorin
DDR1 discoidin domain receptor tyrosine kinase 1
DDR2 discoidin domain receptor tyrosine kinase 2
DSPP dentin sialophosphoprotein
ECM2 extracellular matrix protein 2, female organ and adipocyte specific
FN1 fibronectin 1
GP5 glycoprotein V (platelet)
GP6 glycoprotein VI (platelet)
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12
ITGA1 integrin, alpha 1
ITGA10 integrin, alpha 10
ITGA11 integrin, alpha 11
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA9 integrin, alpha 9
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
LACRT lacritin
LRRC15 leucine rich repeat containing 15
LUM lumican
MMP13 matrix metallopeptidase 13
MMP9 matrix metallopeptidase 9
MRC2 mannose receptor, C type 2
NID1 nidogen 1
NID2 nidogen 2 (osteonidogen)
P3H1 prolyl 3-hydroxylase 1
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PCOLCE procollagen C-endopeptidase enhancer
PCOLCE2 procollagen C-endopeptidase enhancer 2
PDGFA platelet-derived growth factor alpha polypeptide
PDGFB platelet-derived growth factor beta polypeptide
PODN podocan
PPIB peptidylprolyl isomerase B (cyclophilin B)
RELL2 RELT-like 2
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMAD7 SMAD family member 7
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SRGN serglycin
TGFBI transforming growth factor, beta-induced, 68kDa
THBS1 thrombospondin 1
TLL1 tolloid-like 1
TNXB tenascin XB
USH2A Usher syndrome 2A (autosomal recessive, mild)
VWF von Willebrand factor